Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G403.10 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-160 569.7 282 100.0
CAN.G649.11 Capsicum annuum HOM05D000679 ORTHO05D000137 4.7e-75 285.4 444 43.7
CAN.G874.17 Capsicum annuum HOM05D000541 ORTHO05D000137 4.4e-57 225.7 259 50.2
CAN.G321.49 Capsicum annuum HOM05D000679 ORTHO05D000137 1.2e-46 191.0 329 39.5
CAN.G170.81 Capsicum annuum HOM05D000679 ORTHO05D000137 2.6e-41 173.3 269 42.0
CAN.G20.30 Capsicum annuum HOM05D000679 ORTHO05D000568 2.6e-41 173.3 104 83.7
CAN.G1801.7 Capsicum annuum HOM05D000679 ORTHO05D000137 3.9e-37 159.5 100 75.0
CAN.G308.46 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-34 151.4 97 75.3
CAN.G132.23 Capsicum annuum HOM05D000679 ORTHO05D000137 1.7e-32 144.1 87 80.5
CAN.G1045.41 Capsicum annuum HOM05D000679 ORTHO05D000137 5.4e-31 139.0 100 71.0
CAN.G1037.8 Capsicum annuum HOM05D000679 ORTHO05D000137 7.9e-22 108.6 66 69.7
CAN.G411.55 Capsicum annuum HOM05D000679 ORTHO05D000137 8.7e-21 105.1 81 58.0
CAN.G298.47 Capsicum annuum HOM05D000679 ORTHO05D000137 2.8e-19 100.1 67 65.7
CAN.G170.120 Capsicum annuum HOM05D002261 ORTHO05D002334 8.1e-19 98.6 104 48.1
PGSC0003DMG400023044 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.0e-16 91.7 157 33.8
Sopen05g026050 Solanum pennellii HOM05D000679 ORTHO05D000137 3.8e-16 89.7 76 53.9
CAN.G1282.6 Capsicum annuum HOM05D000679 ORTHO05D000137 4.9e-16 89.4 61 59.0
Sopen12g023980 Solanum pennellii HOM05D000679 ORTHO05D000137 6.5e-16 89.0 74 56.8
Sopen11g013410 Solanum pennellii HOM05D000679 ORTHO05D000137 1.1e-15 88.2 74 55.4
Sopen06g005670 Solanum pennellii HOM05D000679 ORTHO05D000137 1.4e-15 87.8 108 46.3
PGSC0003DMG400043944 Solanum tuberosum HOM05D000679 ORTHO05D000137 1.4e-15 87.8 114 39.5
Sopen07g013180 Solanum pennellii HOM05D000679 ORTHO05D000137 1.9e-15 87.4 74 55.4
Sopen04g032900 Solanum pennellii HOM05D000679 ORTHO05D000137 2.5e-15 87.0 74 54.1
Sopen05g008010 Solanum pennellii HOM05D000679 ORTHO05D000137 2.5e-15 87.0 74 54.1
PGSC0003DMG400037689 Solanum tuberosum HOM05D000679 ORTHO05D000137 3.2e-15 86.7 116 42.2
Sopen05g008210 Solanum pennellii HOM05D000679 ORTHO05D000137 4.2e-15 86.3 74 54.1
Sopen07g015500 Solanum pennellii HOM05D000679 ORTHO05D000137 4.2e-15 86.3 74 54.1
Sopen01g028110 Solanum pennellii HOM05D000679 ORTHO05D000137 5.5e-15 85.9 76 53.9
PGSC0003DMG400043648 Solanum tuberosum HOM05D000679 ORTHO05D000482 9.3e-15 85.1 192 32.3
Sopen08g005460 Solanum pennellii HOM05D000679 ORTHO05D000137 1.6e-14 84.3 74 54.1
Sopen09g025660 Solanum pennellii HOM05D000679 ORTHO05D000137 1.6e-14 84.3 76 52.6
Sopen03g024750 Solanum pennellii HOM05D000679 ORTHO05D000137 2.1e-14 84.0 107 44.9
Sopen08g005880 Solanum pennellii HOM05D000679 ORTHO05D000137 2.1e-14 84.0 74 52.7
Sopen09g012220 Solanum pennellii HOM05D000679 ORTHO05D000137 2.1e-14 84.0 74 52.7
Sopen08g011470 Solanum pennellii HOM05D000679 ORTHO05D000137 1.0e-13 81.6 74 51.4
PGSC0003DMG400000082 Solanum tuberosum HOM05D000679 ORTHO05D000137 3.0e-13 80.1 86 43.0
CAN.G407.84 Capsicum annuum HOM05D000679 ORTHO05D115734 5.1e-13 79.3 64 57.8
Peaxi162Scf01147g00017 Petunia axillaris HOM05D010453 ORTHO05D000137 6.7e-13 79.0 80 48.8
CAN.G522.6 Capsicum annuum HOM05D000679 ORTHO05D000137 3.3e-12 76.6 77 49.4
PGSC0003DMG400025964 Solanum tuberosum HOM05D000679 ORTHO05D000137 3.3e-12 76.6 89 42.7
PGSC0003DMG400042642 Solanum tuberosum HOM05D000679 ORTHO05D000137 4.3e-12 76.3 133 33.1
PGSC0003DMG400039352 Solanum tuberosum HOM05D000679 ORTHO05D000482 7.4e-12 75.5 92 44.6
CAN.G697.14 Capsicum annuum HOM05D000679 ORTHO05D000137 1.3e-11 74.7 54 55.6
Nitab4.5_0000357g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.8e-10 70.9 262 28.6
CAN.G1277.5 Capsicum annuum HOM05D000679 ORTHO05D000482 5.3e-10 69.3 51 68.6
Sopen07g017260 Solanum pennellii HOM05D000679 ORTHO05D000137 6.9e-10 68.9 80 47.5
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-09 68.2 91 40.7
PGSC0003DMG400034380 Solanum tuberosum HOM05D011278 ORTHO05D000137 1.5e-09 67.8 83 41.0
Nitab4.5_0002160g0110 Nicotiana tabacum HOM05D000713 ORTHO05D000482 3.4e-09 66.6 91 40.7
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 3.4e-09 66.6 80 46.2
Sopen12g024080 Solanum pennellii HOM05D000679 ORTHO05D000137 3.4e-09 66.6 80 46.2
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 4.5e-09 66.2 80 47.5
Peaxi162Scf00237g00177 Petunia axillaris HOM05D000679 ORTHO05D000137 5.9e-09 65.9 87 43.7
PGSC0003DMG400034471 Solanum tuberosum HOM05D000679 ORTHO05D000137 5.9e-09 65.9 70 47.1
Nitab4.5_0003022g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.0e-08 65.1 208 26.9
Nitab4.5_0000326g0300 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.7e-08 64.3 90 38.9
Solyc01g059760.3 Solanum lycopersicum HOM05D000679 ORTHO05D000137 1.7e-08 64.3 80 43.8
PGSC0003DMG400046174 Solanum tuberosum HOM05D000679 ORTHO05D000482 1.7e-08 64.3 94 36.2
PGSC0003DMG400000031 Solanum tuberosum HOM05D005063 ORTHO05D000482 2.2e-08 63.9 91 40.7
CAN.G900.49 Capsicum annuum HOM05D000679 ORTHO05D000137 3.8e-08 63.2 39 71.8
Sopen05g015890 Solanum pennellii HOM05D010988 ORTHO05D000137 3.8e-08 63.2 66 47.0
PGSC0003DMG400043182 Solanum tuberosum HOM05D000679 ORTHO05D000137 3.8e-08 63.2 66 48.5
PGSC0003DMG400003239 Solanum tuberosum HOM05D011278 ORTHO05D014267 5.0e-08 62.8 83 39.8
PGSC0003DMG400037565 Solanum tuberosum HOM05D000679 ORTHO05D000137 5.0e-08 62.8 74 43.2
Nitab4.5_0007035g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 6.5e-08 62.4 114 36.0
Peaxi162Scf00159g00113 Petunia axillaris HOM05D010453 ORTHO05D012004 6.5e-08 62.4 113 33.6
Sopen12g021510 Solanum pennellii HOM05D000679 ORTHO05D000137 6.5e-08 62.4 80 42.5
Nitab4.5_0001317g0140 Nicotiana tabacum HOM05D006812 ORTHO05D000482 8.4e-08 62.0 92 40.2
Nitab4.5_0002315g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 8.4e-08 62.0 108 34.3
Solyc01g094420.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 8.4e-08 62.0 91 39.6
Nitab4.5_0005336g0040 Nicotiana tabacum HOM05D005877 ORTHO05D011670 1.1e-07 61.6 142 30.3
Peaxi162Scf01061g00128 Petunia axillaris HOM05D015093 ORTHO05D012004 1.1e-07 61.6 74 43.2
Sopen01g038220 Solanum pennellii HOM05D005063 ORTHO05D000482 1.1e-07 61.6 91 39.6
Sopen01g030890 Solanum pennellii HOM05D000679 ORTHO05D000137 1.4e-07 61.2 81 42.0
Sopen06g010730 Solanum pennellii HOM05D000679 ORTHO05D000137 1.9e-07 60.8 71 46.5
Sopen12g022620 Solanum pennellii HOM05D010988 ORTHO05D000137 1.9e-07 60.8 66 45.5
CAN.G416.38 Capsicum annuum HOM05D001361 ORTHO05D005105 3.2e-07 60.1 66 47.0
CAN.G998.1 Capsicum annuum HOM05D009195 ORTHO05D000137 3.2e-07 60.1 88 43.2
Peaxi162Scf00334g00092 Petunia axillaris HOM05D015093 ORTHO05D012004 3.2e-07 60.1 73 43.8
Solyc12g044952.1 Solanum lycopersicum HOM05D000679 ORTHO05D000137 3.2e-07 60.1 80 42.5
Nitab4.5_0008354g0060 Nicotiana tabacum HOM05D005877 ORTHO05D000482 4.2e-07 59.7 213 26.8
Peaxi162Scf01691g00007 Petunia axillaris HOM05D010453 ORTHO05D012004 4.2e-07 59.7 58 53.4
Sopen09g020240 Solanum pennellii HOM05D010988 ORTHO05D000137 4.2e-07 59.7 66 43.9
Sopen11g024470 Solanum pennellii HOM05D000679 ORTHO05D000482 4.2e-07 59.7 94 33.0
PGSC0003DMG400037778 Solanum tuberosum HOM05D011278 ORTHO05D000137 4.2e-07 59.7 78 39.7
Nitab4.5_0008587g0040 Nicotiana tabacum HOM05D005877 ORTHO05D010356 5.5e-07 59.3 211 26.5
Nitab4.5_0016274g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 5.5e-07 59.3 73 43.8
Sopen10g007210 Solanum pennellii HOM05D000679 ORTHO05D000137 5.5e-07 59.3 73 47.9
Nitab4.5_0001725g0070 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.2e-07 58.9 92 38.0
Sopen05g022570 Solanum pennellii HOM05D000679 ORTHO05D000137 7.2e-07 58.9 78 41.0
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 7.2e-07 58.9 94 33.0
Sopen12g022010 Solanum pennellii HOM05D000002 ORTHO05D000001 7.2e-07 58.9 94 33.0
CAN.G65.146 Capsicum annuum HOM05D002676 ORTHO05D003194 9.3e-07 58.5 32 78.1
Sopen10g007030 Solanum pennellii HOM05D000004 ORTHO05D000002 9.3e-07 58.5 80 41.2
CAN.G27.26 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-06 58.2 84 38.1
Sopen10g028350 Solanum pennellii HOM05D000679 ORTHO05D000137 1.2e-06 58.2 78 41.0
Nitab4.5_0004238g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 1.6e-06 57.8 93 36.6
Sopen01g053420 Solanum pennellii HOM05D000679 ORTHO05D014266 1.6e-06 57.8 94 33.0
CAN.G112.29 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-06 57.4 142 30.3
CAN.G638.77 Capsicum annuum HOM05D000541 ORTHO05D000137 2.1e-06 57.4 118 32.2
Nitab4.5_0002352g0090 Nicotiana tabacum HOM05D002262 ORTHO05D000482 2.1e-06 57.4 272 25.7
Nitab4.5_0003581g0050 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.1e-06 57.4 148 30.4
CAN.G321.41 Capsicum annuum HOM05D000541 ORTHO05D000137 2.7e-06 57.0 62 46.8
Nitab4.5_0003037g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000137 2.7e-06 57.0 83 38.6
Nitab4.5_0005271g0050 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.7e-06 57.0 109 33.0
Nitab4.5_0006716g0010 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.7e-06 57.0 113 31.9
Nitab4.5_0018926g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.7e-06 57.0 146 28.1
Nitab4.5_0019772g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 2.7e-06 57.0 113 31.9
PGSC0003DMG400023258 Solanum tuberosum HOM05D000541 ORTHO05D000137 2.7e-06 57.0 75 38.7
CAN.G1077.11 Capsicum annuum HOM05D000679 ORTHO05D000137 3.5e-06 56.6 92 34.8
CAN.G219.60 Capsicum annuum HOM05D000541 ORTHO05D000137 3.5e-06 56.6 83 39.8
CAN.G339.36 Capsicum annuum HOM05D000541 ORTHO05D000137 3.5e-06 56.6 60 45.0
Nitab4.5_0008885g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 3.5e-06 56.6 108 32.4
Solyc06g008150.3 Solanum lycopersicum HOM05D005063 ORTHO05D000482 3.5e-06 56.6 90 34.4
Sopen06g002980 Solanum pennellii HOM05D005063 ORTHO05D000482 3.5e-06 56.6 90 34.4
Sopen11g022980 Solanum pennellii HOM05D000679 ORTHO05D000137 3.5e-06 56.6 94 33.0
CAN.G1621.4 Capsicum annuum HOM05D000541 ORTHO05D000137 4.6e-06 56.2 108 33.3
CAN.G242.13 Capsicum annuum HOM05D009195 ORTHO05D000137 4.6e-06 56.2 84 41.7
CAN.G314.7 Capsicum annuum HOM05D000679 ORTHO05D000137 4.6e-06 56.2 86 37.2
Nitab4.5_0000709g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.6e-06 56.2 93 37.6
Nitab4.5_0003110g0120 Nicotiana tabacum HOM05D006812 ORTHO05D000482 4.6e-06 56.2 88 37.5
CAN.G58.24 Capsicum annuum HOM05D009195 ORTHO05D000137 6.1e-06 55.8 88 42.0
Nitab4.5_0000725g0160 Nicotiana tabacum HOM05D000679 ORTHO05D000137 6.1e-06 55.8 69 43.5
Sopen01g026480 Solanum pennellii HOM05D000679 ORTHO05D000137 6.1e-06 55.8 78 39.7
CAN.G1045.46 Capsicum annuum HOM05D000541 ORTHO05D000137 7.9e-06 55.5 65 40.0
CAN.G1568.2 Capsicum annuum HOM05D009195 ORTHO05D000137 7.9e-06 55.5 143 31.5
CAN.G290.9 Capsicum annuum HOM05D000541 ORTHO05D000137 7.9e-06 55.5 83 39.8
CAN.G326.5 Capsicum annuum HOM05D009195 ORTHO05D016873 7.9e-06 55.5 124 33.1
CAN.G971.1 Capsicum annuum HOM05D000679 ORTHO05D000137 7.9e-06 55.5 93 34.4
Nitab4.5_0000721g0150 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.9e-06 55.5 93 36.6
Nitab4.5_0001230g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.9e-06 55.5 59 44.1
Nitab4.5_0002282g0080 Nicotiana tabacum HOM05D005877 ORTHO05D000482 7.9e-06 55.5 212 27.4
Nitab4.5_0005135g0050 Nicotiana tabacum HOM05D006812 ORTHO05D000482 7.9e-06 55.5 79 41.8
Nitab4.5_0008288g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 7.9e-06 55.5 70 40.0
Sopen05g031060 Solanum pennellii HOM05D009268 ORTHO05D011733 7.9e-06 55.5 82 37.8
Sopen09g004400 Solanum pennellii HOM05D009268 ORTHO05D011733 7.9e-06 55.5 82 37.8
Sopen09g021100 Solanum pennellii HOM05D009268 ORTHO05D011733 7.9e-06 55.5 82 37.8
PGSC0003DMG400005238 Solanum tuberosum HOM05D011278 ORTHO05D014267 7.9e-06 55.5 57 42.1


User provided reference genes

Program Settings