Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G401.11 Capsicum annuum HOM05D003487 ORTHO05D000140 2.4e-75 285.4 143 100.0
CAN.G1245.13 Capsicum annuum HOM05D003487 ORTHO05D000140 2.9e-57 225.3 142 77.5
CAN.G520.2 Capsicum annuum HOM05D003487 ORTHO05D000140 3.8e-57 224.9 142 77.5
CAN.G374.4 Capsicum annuum HOM05D003487 ORTHO05D000140 2.7e-55 218.8 127 86.6
CAN.G81.4 Capsicum annuum HOM05D003487 ORTHO05D000140 4.0e-54 214.9 133 80.5
CAN.G46.12 Capsicum annuum HOM05D003487 ORTHO05D000140 6.7e-54 214.2 142 75.4
CAN.G1245.14 Capsicum annuum HOM05D003487 ORTHO05D000140 1.2e-53 213.4 142 75.4
CAN.G1070.4 Capsicum annuum HOM05D003487 ORTHO05D000140 4.1e-51 204.9 136 74.3
CAN.G741.45 Capsicum annuum HOM05D003487 ORTHO05D000140 2.0e-50 202.6 129 80.6
CAN.G153.17 Capsicum annuum HOM05D003487 ORTHO05D000140 4.5e-50 201.4 134 74.6
CAN.G687.22 Capsicum annuum HOM05D000541 ORTHO05D000137 1.0e-49 200.3 125 83.2
CAN.G112.28 Capsicum annuum HOM05D003487 ORTHO05D000140 2.2e-49 199.1 128 77.3
Nitab4.5_0006735g0070 Nicotiana tabacum HOM05D003487 ORTHO05D000140 2.2e-49 199.1 144 70.8
CAN.G1125.1 Capsicum annuum HOM05D003487 ORTHO05D000140 3.2e-48 195.3 128 77.3
CAN.G13.2 Capsicum annuum HOM05D003487 ORTHO05D000140 6.1e-47 191.0 125 77.6
CAN.G255.10 Capsicum annuum HOM05D003487 ORTHO05D000140 3.0e-46 188.7 126 75.4
Sopen06g011790 Solanum pennellii HOM05D003487 ORTHO05D000140 5.2e-46 188.0 142 67.6
Nitab4.5_0003364g0100 Nicotiana tabacum HOM05D003487 ORTHO05D000140 4.4e-45 184.9 143 65.0
Solyc10g018645.1 Solanum lycopersicum HOM05D003487 ORTHO05D000140 1.3e-44 183.3 142 65.5
Solyc12g036870.3 Solanum lycopersicum HOM05D003487 ORTHO05D000140 3.7e-44 181.8 142 64.8
CAN.G629.2 Capsicum annuum HOM05D003487 ORTHO05D000140 4.8e-44 181.4 140 68.6
CAN.G854.11 Capsicum annuum HOM05D003487 ORTHO05D000140 8.3e-44 180.6 113 78.8
Nitab4.5_0000184g0260 Nicotiana tabacum HOM05D003487 ORTHO05D000140 1.1e-43 180.3 144 63.9
Sopen09g020440 Solanum pennellii HOM05D003487 ORTHO05D000140 2.7e-42 175.6 141 64.5
Sopen10g020570 Solanum pennellii HOM05D003487 ORTHO05D000140 8.6e-41 170.6 132 66.7
CAN.G56.15 Capsicum annuum HOM05D003487 ORTHO05D000140 1.5e-40 169.9 127 70.1
CAN.G24361.1 Capsicum annuum HOM05D003487 ORTHO05D000140 2.6e-37 159.1 104 76.0
Nitab4.5_0009514g0020 Nicotiana tabacum HOM05D003487 ORTHO05D000140 1.7e-36 156.4 129 62.0
Solyc08g066480.3 Solanum lycopersicum HOM05D003487 ORTHO05D000140 2.4e-35 152.5 117 65.8
Nitab4.5_0000324g0090 Nicotiana tabacum HOM05D003487 ORTHO05D000140 2.7e-34 149.1 112 68.8
Nitab4.5_0002695g0080 Nicotiana tabacum HOM05D003487 ORTHO05D000140 3.5e-34 148.7 115 66.1
Nitab4.5_0002082g0050 Nicotiana tabacum HOM05D003487 ORTHO05D000140 1.7e-33 146.4 144 54.9
CAN.G535.17 Capsicum annuum HOM05D003487 ORTHO05D000140 2.3e-33 146.0 131 59.5
CAN.G61.13 Capsicum annuum HOM05D003487 ORTHO05D000140 6.6e-33 144.4 93 78.5
CAN.G540.2 Capsicum annuum HOM05D003487 ORTHO05D000140 1.4e-30 136.7 134 55.2
CAN.G179.5 Capsicum annuum HOM05D003487 ORTHO05D000140 1.1e-27 127.1 81 75.3
CAN.G153.6 Capsicum annuum HOM05D003487 ORTHO05D000140 9.2e-27 124.0 82 74.4
CAN.G362.4 Capsicum annuum HOM05D000275 ORTHO05D000181 3.5e-26 122.1 83 72.3
CAN.G42.3 Capsicum annuum HOM05D003487 ORTHO05D000140 3.5e-26 122.1 131 55.0
Nitab4.5_0000712g0260 Nicotiana tabacum HOM05D003487 ORTHO05D000140 1.8e-22 109.8 134 50.0
Nitab4.5_0001071g0070 Nicotiana tabacum HOM05D003487 ORTHO05D000140 4.0e-22 108.6 142 45.1
CAN.G810.2 Capsicum annuum HOM05D003487 ORTHO05D000140 4.4e-21 105.1 69 79.7
Nitab4.5_0005999g0040 Nicotiana tabacum HOM05D003487 ORTHO05D000140 4.1e-19 98.6 119 44.5
vmacro02377 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 4.1e-19 98.6 147 40.8
Rhsim08G0145100 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.5e-18 95.5 147 42.2
Potri.001G014200 Populus trichocarpa HOM05D003487 ORTHO05D000140 6.0e-18 94.7 143 38.5
vmacro10807 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 1.0e-17 94.0 145 40.7
Potri.002G206500 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.7e-17 93.2 145 37.9
Hma1.2p1_0825F.1_g224780 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 2.3e-17 92.8 154 35.1
Potri.006G202550 Populus trichocarpa HOM05D003487 ORTHO05D000140 2.3e-17 92.8 143 34.3
Potri.015G008050 Populus trichocarpa HOM05D003487 ORTHO05D000140 2.3e-17 92.8 145 37.2
Potri.011G163248 Populus trichocarpa HOM05D003487 ORTHO05D000140 3.0e-17 92.4 143 35.0
Hund12564 Selenicereus undatus HOM05D003487 ORTHO05D000140 3.0e-17 92.4 141 36.2
Hund24317 Selenicereus undatus HOM05D003487 ORTHO05D000140 3.9e-17 92.0 144 35.4
Hma1.2p1_0148F.1_g065930 Hydrangea macrophylla HOM05D000034 ORTHO05D000140 6.6e-17 91.3 152 38.2
Sopen02g015990 Solanum pennellii HOM05D003487 ORTHO05D000140 6.6e-17 91.3 74 63.5
Potri.012G061366 Populus trichocarpa HOM05D003487 ORTHO05D000140 8.6e-17 90.9 145 35.9
vmacro11918 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 8.6e-17 90.9 147 40.8
Hund12608 Selenicereus undatus HOM05D003487 ORTHO05D000140 1.1e-16 90.5 141 36.2
Hma1.2p1_0619F.1_g190440 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 1.5e-16 90.1 154 35.7
Hma1.2p1_0065F.1_g035600 Hydrangea macrophylla HOM05D000034 ORTHO05D000140 4.3e-16 88.6 154 35.7
Hma1.2p1_1819F.1_g304060 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 4.3e-16 88.6 150 39.3
Potri.009G022650 Populus trichocarpa HOM05D003487 ORTHO05D000140 4.3e-16 88.6 145 35.9
CAN.G318.14 Capsicum annuum HOM05D003487 ORTHO05D000140 5.6e-16 88.2 52 82.7
Potri.001G157750 Populus trichocarpa HOM05D003487 ORTHO05D000140 5.6e-16 88.2 145 36.6
Potri.004G108960 Populus trichocarpa HOM05D003487 ORTHO05D000140 9.5e-16 87.4 145 35.2
Potri.006G196716 Populus trichocarpa HOM05D003487 ORTHO05D000140 9.5e-16 87.4 145 35.2
Hund18021 Selenicereus undatus HOM05D003487 ORTHO05D000140 1.2e-15 87.0 100 40.0
Rhsim13G0095900 Rhododendron simsii HOM05D003487 ORTHO05D000140 2.1e-15 86.3 140 40.0
Hund31263 Selenicereus undatus HOM05D003487 ORTHO05D000140 2.8e-15 85.9 142 33.1
Hund21113 Selenicereus undatus HOM05D003487 ORTHO05D000140 3.6e-15 85.5 145 33.1
Hund18294 Selenicereus undatus HOM05D003487 ORTHO05D000140 4.7e-15 85.1 134 35.1
Cc11_g14620 Coffea canephora HOM05D003487 ORTHO05D000140 8.1e-15 84.3 146 35.6
Potri.006G146100 Populus trichocarpa HOM05D003487 ORTHO05D000140 8.1e-15 84.3 140 35.7
Hund08176 Selenicereus undatus HOM05D003487 ORTHO05D000140 8.1e-15 84.3 100 39.0
Hund31374 Selenicereus undatus HOM05D003487 ORTHO05D000140 8.1e-15 84.3 142 33.8
Potri.007G059900 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.4e-14 83.6 146 36.3
Potri.004G111750 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.8e-14 83.2 135 35.6
Rhsim11G0013100 Rhododendron simsii HOM05D003487 ORTHO05D000140 1.8e-14 83.2 141 36.9
Hma1.2p1_0496F.1_g166260 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 2.3e-14 82.8 141 35.5
Potri.018G071050 Populus trichocarpa HOM05D003487 ORTHO05D000140 2.3e-14 82.8 141 34.0
Hund30962 Selenicereus undatus HOM05D003487 ORTHO05D000140 4.0e-14 82.0 141 34.8
CAN.G1184.1 Capsicum annuum HOM05D003487 ORTHO05D000140 6.8e-14 81.3 47 87.2
Hund30836 Selenicereus undatus HOM05D003487 ORTHO05D000140 6.8e-14 81.3 142 34.5
Potri.011G088750 Populus trichocarpa HOM05D003487 ORTHO05D000140 8.9e-14 80.9 80 46.2
QL01p054930 Quercus lobata HOM05D003487 ORTHO05D000140 8.9e-14 80.9 114 37.7
Potri.004G170442 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.2e-13 80.5 90 43.3
Hund31241 Selenicereus undatus HOM05D003487 ORTHO05D000140 1.2e-13 80.5 141 34.8
QL09p003532 Quercus lobata HOM05D000005 ORTHO05D000012 2.0e-13 79.7 143 39.2
AUR62038965 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.6e-13 79.3 139 33.8
AUR62042315 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.4e-13 79.0 139 33.8
Hund03759 Selenicereus undatus HOM05D003487 ORTHO05D000140 3.4e-13 79.0 117 35.9
Nitab4.5_0003466g0040 Nicotiana tabacum HOM05D003487 ORTHO05D000140 1.3e-12 77.0 80 55.0
Potri.019G009855 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.7e-12 76.6 93 40.9
QL06p004451 Quercus lobata HOM05D003487 ORTHO05D000140 2.2e-12 76.3 142 32.4
Hma1.2p1_0854F.1_g228980 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 2.9e-12 75.9 139 36.7
QL09p003516 Quercus lobata HOM05D000005 ORTHO05D000012 3.7e-12 75.5 140 37.9
EL10Ac4g08757 Beta vulgaris HOM05D000034 ORTHO05D000037 1.4e-11 73.6 145 33.1
vmacro22792 Vaccinium macrocarpon HOM05D002841 ORTHO05D003158 3.2e-11 72.4 68 48.5
EL10Ac6g13765 Beta vulgaris HOM05D003487 ORTHO05D000140 9.2e-11 70.9 94 38.3
AUR62040172 Chenopodium quinoa HOM05D003487 ORTHO05D000140 9.2e-11 70.9 140 32.1
EL10Ac5g11982 Beta vulgaris HOM05D003487 ORTHO05D000140 1.2e-10 70.5 97 38.1
AUR62013895 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.2e-10 70.5 144 30.6
EL10Ac5g12133 Beta vulgaris HOM05D003487 ORTHO05D000140 1.6e-10 70.1 139 31.7
AUR62035004 Chenopodium quinoa HOM05D000034 ORTHO05D000140 1.6e-10 70.1 140 32.1
TWI38G1585 Tripterygium wilfordii HOM05D003487 ORTHO05D000140 1.6e-10 70.1 133 32.3
AUR62037304 Chenopodium quinoa HOM05D003487 ORTHO05D000140 2.1e-10 69.7 139 32.4
Eucgr.L01297 Eucalyptus grandis HOM05D003487 ORTHO05D000140 2.1e-10 69.7 72 45.8
Hma1.2p1_0028F.1_g017450 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 2.1e-10 69.7 135 35.6
Hma1.2p1_2665F.1_g326480 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 2.1e-10 69.7 130 36.2
Nitab4.5_0007277g0020 Nicotiana tabacum HOM05D003487 ORTHO05D000140 2.1e-10 69.7 118 38.1
Solyc06g034310.4 Solanum lycopersicum HOM05D000034 ORTHO05D000037 2.7e-10 69.3 64 54.7
vmacro08490 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 2.7e-10 69.3 147 34.0
EL10Ac1g01615 Beta vulgaris HOM05D003487 ORTHO05D000140 6.0e-10 68.2 139 31.7
AUR62011688 Chenopodium quinoa HOM05D003487 ORTHO05D000140 1.3e-09 67.0 141 31.2
AUR62026962 Chenopodium quinoa HOM05D003487 ORTHO05D000140 1.7e-09 66.6 139 30.9
Hund01268 Selenicereus undatus HOM05D003487 ORTHO05D000140 3.0e-09 65.9 129 31.0
AUR62019017 Chenopodium quinoa HOM05D003487 ORTHO05D000140 5.1e-09 65.1 140 31.4
Hund18007 Selenicereus undatus HOM05D003487 ORTHO05D000140 5.1e-09 65.1 128 29.7
AUR62031863 Chenopodium quinoa HOM05D003487 ORTHO05D000140 6.6e-09 64.7 141 31.2
AUR62035025 Chenopodium quinoa HOM05D003487 ORTHO05D000140 6.6e-09 64.7 104 33.7
EL10Ac8g19661 Beta vulgaris HOM05D003487 ORTHO05D000140 8.6e-09 64.3 110 38.2
AUR62042357 Chenopodium quinoa HOM05D003487 ORTHO05D000140 1.1e-08 63.9 141 28.4
Potri.003G047151 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.5e-08 63.5 145 30.3
Aqoxy1G02676 Aquilegia oxysepala HOM05D003487 ORTHO05D000140 2.5e-08 62.8 142 28.9
Rhsim06G0037500 Rhododendron simsii HOM05D000122 ORTHO05D000139 3.3e-08 62.4 95 35.8
AUR62027137 Chenopodium quinoa HOM05D000034 ORTHO05D000140 5.6e-08 61.6 123 29.3
QL09p053714 Quercus lobata HOM05D003487 ORTHO05D000140 5.6e-08 61.6 157 31.2
Rhsim06G0037400 Rhododendron simsii HOM05D000122 ORTHO05D000139 9.5e-08 60.8 125 32.8
vmacro08955 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 9.5e-08 60.8 121 36.4
QL03p048663 Quercus lobata HOM05D003487 ORTHO05D000140 1.2e-07 60.5 146 32.9
QL93p0141_0031 Quercus lobata HOM05D003487 ORTHO05D000140 1.2e-07 60.5 146 32.9
AUR62041800 Chenopodium quinoa HOM05D003487 ORTHO05D000140 2.1e-07 59.7 92 33.7
AUR62005364 Chenopodium quinoa HOM05D003487 ORTHO05D000140 2.8e-07 59.3 71 40.8
Nn7g37837 Nelumbo nucifera HOM05D019910 ORTHO05D000140 3.6e-07 58.9 89 34.8
COL.COLO4_37060 Corchorus olitorius HOM05D003487 ORTHO05D000140 4.7e-07 58.5 147 30.6
QL08p053984 Quercus lobata HOM05D000034 ORTHO05D000037 4.7e-07 58.5 121 25.6
Hund11036 Selenicereus undatus HOM05D003487 ORTHO05D000140 4.7e-07 58.5 124 30.6
AUR62019443 Chenopodium quinoa HOM05D003487 ORTHO05D000140 6.2e-07 58.2 134 27.6
Gorai.004G071000 Gossypium raimondii HOM05D003487 ORTHO05D000140 8.1e-07 57.8 142 27.5
Hund31117 Selenicereus undatus HOM05D003487 ORTHO05D000140 3.1e-06 55.8 142 27.5
QL02p048869 Quercus lobata HOM05D003487 ORTHO05D000140 5.2e-06 55.1 95 26.3
Cc05_g02570 Coffea canephora HOM05D003487 ORTHO05D000140 6.8e-06 54.7 47 53.2


User provided reference genes

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