Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 4.4e-178 627.9 325 100.0
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 5.7e-157 557.8 327 88.4
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 9.0e-155 550.4 327 88.1
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 6.5e-153 544.3 327 87.8
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.3e-145 520.0 324 84.6
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.4e-144 516.5 325 82.8
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.2e-119 433.7 322 70.5
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 3.0e-118 429.1 323 70.6
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.5e-117 426.8 321 72.6
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 2.6e-117 426.0 322 69.6
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 2.2e-116 422.9 309 70.6
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 2.8e-116 422.5 321 68.8
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 8.3e-116 421.0 320 71.2
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 4.1e-115 418.7 322 68.6
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 2.2e-113 412.9 321 69.2
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 2.9e-113 412.5 320 67.5
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 5.5e-112 408.3 283 74.9
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 9.4e-112 407.5 327 66.4
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 9.4e-112 407.5 322 67.4
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 1.6e-111 406.8 326 67.8
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 2.1e-111 406.4 322 67.1
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 3.6e-111 405.6 324 68.2
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 6.1e-111 404.8 324 69.8
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 6.1e-111 404.8 330 67.0
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 8.0e-111 404.4 327 67.0
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 1.0e-110 404.1 327 68.8
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 1.4e-110 403.7 323 65.6
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.8e-110 403.3 328 68.6
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 3.0e-110 402.5 323 68.4
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 4.0e-110 402.1 324 66.7
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 6.8e-110 401.4 329 68.1
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 4.4e-109 398.7 315 67.6
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 5.7e-109 398.3 332 65.1
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 8.3e-108 394.4 331 65.6
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.1e-107 394.0 339 64.0
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 3.1e-107 392.5 320 68.4
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 4.1e-107 392.1 322 65.8
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 7.0e-107 391.3 327 65.4
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 9.2e-107 391.0 327 66.1
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 4.5e-106 388.7 328 64.9
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 5.9e-106 388.3 282 72.3
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 1.3e-105 387.1 327 64.8
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 2.3e-105 386.3 313 67.4
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 2.3e-105 386.3 336 62.2
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 2.3e-105 386.3 324 65.7
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 2.3e-105 386.3 321 66.4
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.9e-105 386.0 332 64.2
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 8.6e-105 384.4 268 72.8
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.1e-104 384.0 328 64.0
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 1.5e-104 383.6 321 65.1
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 2.5e-104 382.9 316 65.2
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 2.5e-104 382.9 324 65.1
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.5e-104 382.9 333 63.1
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 3.3e-104 382.5 327 63.3
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 4.3e-104 382.1 333 62.5
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 5.6e-104 381.7 295 68.1
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 7.3e-104 381.3 328 64.0
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 1.2e-103 380.6 260 73.5
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 1.2e-103 380.6 325 65.2
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.2e-103 380.6 222 89.6
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.2e-103 380.6 323 63.2
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 2.1e-103 379.8 332 62.0
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 2.1e-103 379.8 322 63.4
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 6.1e-103 378.3 249 78.7
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 8.0e-103 377.9 260 73.5
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 1.0e-102 377.5 289 66.8
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 1.4e-102 377.1 260 72.3
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 3.0e-102 375.9 259 74.1
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 4.0e-102 375.6 367 59.4
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 5.2e-102 375.2 260 72.3
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 6.8e-102 374.8 351 59.5
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 8.9e-102 374.4 260 73.1
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 1.2e-101 374.0 355 60.6
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 2.0e-101 373.2 259 72.6
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 4.4e-101 372.1 263 73.0
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 8.3e-100 367.9 257 73.9
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 1.1e-99 367.5 249 75.5
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 1.8e-99 366.7 310 62.9
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 4.1e-99 365.5 259 73.4
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 9.2e-99 364.4 347 58.5
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 3.5e-98 362.5 333 60.4
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 7.8e-98 361.3 330 60.9
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 1.0e-97 360.9 259 67.6
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 5.0e-97 358.6 267 67.0
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 1.9e-96 356.7 235 79.1
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 5.6e-96 355.1 342 58.2
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 2.8e-95 352.8 235 77.0
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 2.3e-94 349.7 323 58.8
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.4e-91 340.5 293 63.8
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.4e-91 340.5 319 58.6
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 6.2e-87 325.1 250 66.8
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.5e-85 320.5 334 56.9
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.0e-85 320.1 235 69.8
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 3.6e-79 299.3 251 63.3
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 3.6e-79 299.3 211 72.5
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 9.9e-77 291.2 184 78.8
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 3.8e-76 289.3 215 67.4
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 1.6e-74 283.9 260 55.0
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 3.5e-74 282.7 252 59.5
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 2.3e-73 280.0 222 63.1
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 4.4e-69 265.8 260 52.7
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 2.2e-68 263.5 260 52.7
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 3.2e-67 259.6 260 59.2
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.3e-64 249.2 263 49.0
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.5e-61 240.7 251 50.6
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.6e-61 240.0 255 49.8
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 1.7e-60 237.3 274 47.4
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.2e-59 232.6 250 50.4
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.6e-50 204.1 252 43.7
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.3e-44 184.5 129 73.6
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 2.9e-44 183.3 247 42.9
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 8.2e-39 165.2 165 57.0
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 5.3e-38 162.5 126 67.5
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 9.0e-38 161.8 247 36.8
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 1.0e-28 131.7 291 36.8
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.0e-25 121.7 84 69.0
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 7.4e-24 115.5 245 29.8
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 8.2e-23 112.1 272 33.1
Actinidia30278 Actinidia chinensis HOM05D005233 ORTHO05D006308 4.4e-08 63.2 68 60.3
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 9.7e-08 62.0 31 100.0


User provided reference genes

Program Settings