Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G400.14 Capsicum annuum HOM05D003911 ORTHO05D001773 4.2e-159 564.7 293 100.0
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 6.7e-32 142.1 432 30.1
CAN.G43.13 Capsicum annuum HOM05D003911 ORTHO05D002175 2.4e-29 133.7 178 47.8
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.7e-27 127.5 342 31.6
PGSC0003DMG400035210 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.1e-21 106.7 219 37.0
PGSC0003DMG400043570 Solanum tuberosum HOM05D003911 ORTHO05D002175 1.5e-20 104.4 199 40.2
CAN.G229.21 Capsicum annuum HOM05D000310 ORTHO05D000509 3.0e-16 90.1 251 33.1
Solyc02g005145.1 Solanum lycopersicum HOM05D003911 ORTHO05D002175 1.1e-15 88.2 107 45.8
Solyc09g062990.2 Solanum lycopersicum HOM05D003911 ORTHO05D002175 1.5e-15 87.8 107 46.7
CAN.G21.22 Capsicum annuum HOM05D003911 ORTHO05D115628 3.3e-15 86.7 198 35.9
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-14 84.7 102 49.0
Nitab4.5_0001215g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.6e-12 77.0 104 47.1
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.5e-12 76.3 202 32.2
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.7e-12 75.5 134 40.3
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 2.9e-11 73.6 134 39.6
Nitab4.5_0009563g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-09 68.2 135 37.8
PGSC0003DMG400013728 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.7e-09 66.2 182 28.0
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 4.7e-09 66.2 88 44.3
Nitab4.5_0010513g0020 Nicotiana tabacum HOM05D000995 ORTHO05D001773 7.9e-09 65.5 179 29.1
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 1.0e-08 65.1 49 61.2
Sopen09g017340 Solanum pennellii HOM05D000995 ORTHO05D000638 2.3e-08 63.9 199 28.1
Nitab4.5_0002359g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-08 62.8 104 40.4
AUR62025150 Chenopodium quinoa HOM05D004781 ORTHO05D001773 6.7e-08 62.4 88 39.8
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 6.7e-08 62.4 102 41.2
Hund29812 Selenicereus undatus HOM05D004781 ORTHO05D001773 1.1e-07 61.6 86 41.9
EL10Ac6g14812 Beta vulgaris HOM05D004781 ORTHO05D001773 3.3e-07 60.1 149 34.9
Nitab4.5_0005379g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-07 60.1 106 40.6
Solyc04g048905.1 Solanum lycopersicum HOM05D000995 ORTHO05D001773 3.3e-07 60.1 42 66.7
Nitab4.5_0000032g0310 Nicotiana tabacum HOM05D003574 ORTHO05D001773 4.4e-07 59.7 78 46.2
PGSC0003DMG400009586 Solanum tuberosum HOM05D000995 ORTHO05D000638 5.7e-07 59.3 41 61.0
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.4e-07 58.9 203 29.1
ClCG08G001070 Citrullus lanatus HOM05D000995 ORTHO05D001773 9.7e-07 58.5 138 31.9
PGSC0003DMG400030152 Solanum tuberosum HOM05D000995 ORTHO05D001773 9.7e-07 58.5 45 66.7
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 1.3e-06 58.2 107 39.3
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-06 57.4 95 42.1
Hma1.2p1_0446F.1_g154720 Hydrangea macrophylla HOM05D000995 ORTHO05D000638 3.7e-06 56.6 42 61.9
Nitab4.5_0000959g0020 Nicotiana tabacum HOM05D003574 ORTHO05D000638 4.8e-06 56.2 42 61.9
MSTRG.1983 Avicennia marina HOM05D000995 ORTHO05D001773 6.3e-06 55.8 48 54.2
Hma1.2p1_0494F.1_g165370 Hydrangea macrophylla HOM05D000995 ORTHO05D001773 6.3e-06 55.8 148 28.4
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.3e-06 55.8 82 42.7
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 6.3e-06 55.8 130 29.2


User provided reference genes

Program Settings