Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 2.7e-64 248.4 121 100.0
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 7.5e-46 187.2 121 81.0
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 9.8e-38 160.2 119 70.6
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 4.1e-36 154.8 121 71.1
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 5.9e-35 151.0 119 70.6
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 7.3e-25 117.5 96 64.6
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 9.5e-25 117.1 100 64.0
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 6.2e-24 114.4 74 71.6
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 1.4e-23 113.2 119 58.0
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 1.2e-22 110.2 121 52.9
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 2.6e-22 109.0 98 58.2
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 4.4e-22 108.2 123 55.3
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 5.8e-22 107.8 117 54.7
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 7.5e-22 107.5 100 60.0
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 9.8e-22 107.1 87 66.7
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 2.2e-21 105.9 110 57.3
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 2.2e-21 105.9 117 53.8
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 2.2e-21 105.9 82 63.4
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 3.7e-21 105.1 117 53.8
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 3.7e-21 105.1 77 67.5
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 8.3e-21 104.0 106 55.7
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 8.3e-21 104.0 81 63.0
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.1e-20 103.6 114 53.5
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 1.4e-20 103.2 103 57.3
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.4e-20 102.4 110 54.5
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 3.2e-20 102.1 116 54.3
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 3.2e-20 102.1 94 57.4
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 4.1e-20 101.7 79 68.4
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 4.1e-20 101.7 118 48.3
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 5.4e-20 101.3 77 67.5
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 5.4e-20 101.3 95 62.1
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 9.2e-20 100.5 110 54.5
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.2e-19 100.1 56 83.9
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 1.2e-19 100.1 77 66.2
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 1.6e-19 99.8 98 60.2
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.6e-19 99.8 85 63.5
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 2.0e-19 99.4 65 72.3
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 3.5e-19 98.6 110 54.5
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 3.5e-19 98.6 112 55.4
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 7.8e-19 97.4 99 56.6
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 1.0e-18 97.1 100 55.0
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 1.0e-18 97.1 118 55.1
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 1.7e-18 96.3 78 65.4
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 1.7e-18 96.3 93 55.9
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 1.7e-18 96.3 93 57.0
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 3.0e-18 95.5 109 56.9
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 3.9e-18 95.1 78 64.1
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 8.6e-18 94.0 104 49.0
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 8.6e-18 94.0 106 50.0
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 8.6e-18 94.0 83 56.6
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 8.6e-18 94.0 63 71.4
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 1.1e-17 93.6 62 79.0
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 1.9e-17 92.8 65 66.2
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 4.3e-17 91.7 69 75.4
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 5.6e-17 91.3 100 51.0
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 5.6e-17 91.3 96 53.1
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 5.6e-17 91.3 68 67.6
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 5.6e-17 91.3 98 54.1
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 9.5e-17 90.5 63 73.0
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 1.2e-16 90.1 99 50.5
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 1.2e-16 90.1 69 73.9
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 1.2e-16 90.1 118 50.8
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.6e-16 89.7 96 57.3
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 2.1e-16 89.4 102 51.0
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 2.1e-16 89.4 78 60.3
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 2.1e-16 89.4 78 60.3
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 2.1e-16 89.4 78 60.3
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 2.1e-16 89.4 96 52.1
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 2.1e-16 89.4 96 52.1
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 2.1e-16 89.4 63 76.2
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 2.8e-16 89.0 81 55.6
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 2.8e-16 89.0 96 53.1
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 6.2e-16 87.8 96 53.1
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 8.1e-16 87.4 63 66.7
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 8.1e-16 87.4 63 66.7
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 1.1e-15 87.0 128 53.9
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 1.1e-15 87.0 85 58.8
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 1.4e-15 86.7 70 65.7
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 1.4e-15 86.7 106 48.1
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 1.4e-15 86.7 72 69.4
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 1.8e-15 86.3 106 49.1
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 2.3e-15 85.9 119 49.6
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 3.1e-15 85.5 60 71.7
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 3.1e-15 85.5 70 68.6
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 6.8e-15 84.3 102 49.0
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 1.2e-14 83.6 98 51.0
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 2.6e-14 82.4 107 48.6
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 6.4e-13 77.8 62 61.3
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 2.4e-12 75.9 74 60.8
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 3.2e-12 75.5 76 57.9
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 4.1e-12 75.1 124 44.4
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 7.1e-12 74.3 67 62.7
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 1.2e-11 73.6 60 66.7
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 4.6e-11 71.6 71 56.3
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 7.8e-11 70.9 60 63.3
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 3.0e-10 68.9 77 51.9
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 1.9e-09 66.2 60 56.7
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 2.1e-08 62.8 69 50.7
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 2.8e-08 62.4 64 53.1
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 2.8e-08 62.4 64 54.7
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 6.2e-08 61.2 68 50.0
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 3.4e-06 55.5 44 56.8
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 9.9e-06 53.9 63 41.3


User provided reference genes

Program Settings