Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 1.4e-41 172.6 89 100.0
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 1.8e-36 155.6 89 91.0
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 6.5e-31 137.1 89 78.7
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 7.2e-30 133.7 89 76.4
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 7.2e-30 133.7 86 75.6
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 9.4e-30 133.3 89 77.5
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 2.1e-29 132.1 89 76.4
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 2.7e-29 131.7 89 76.4
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 8.0e-29 130.2 85 72.9
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 1.0e-28 129.8 90 76.7
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 1.0e-28 129.8 89 75.3
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 1.8e-28 129.0 85 75.3
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 1.8e-28 129.0 85 72.9
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 4.0e-28 127.9 87 71.3
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 5.2e-28 127.5 85 71.8
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 8.8e-28 126.7 102 67.6
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 1.2e-27 126.3 89 73.0
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 1.5e-27 125.9 89 71.9
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 2.0e-27 125.6 89 73.0
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 2.0e-27 125.6 89 74.2
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 2.0e-27 125.6 89 74.2
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 2.6e-27 125.2 89 73.0
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 2.6e-27 125.2 89 73.0
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 2.6e-27 125.2 85 71.8
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 5.7e-27 124.0 86 73.3
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 7.5e-27 123.6 89 73.0
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 1.7e-26 122.5 84 72.6
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 2.8e-26 121.7 90 68.9
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 8.3e-26 120.2 85 70.6
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 1.1e-25 119.8 82 68.3
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 1.4e-25 119.4 87 67.8
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 4.1e-25 117.9 88 62.5
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 5.3e-25 117.5 88 62.5
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 5.3e-25 117.5 88 60.2
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 7.0e-25 117.1 85 68.2
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 1.2e-24 116.3 82 72.0
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 1.2e-24 116.3 88 68.2
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 1.2e-24 116.3 88 60.2
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 1.6e-24 115.9 82 65.9
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 2.0e-24 115.5 88 62.5
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 2.0e-24 115.5 86 65.1
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 2.0e-24 115.5 88 62.5
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 7.7e-24 113.6 88 59.1
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 1.0e-23 113.2 88 59.1
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 1.0e-23 113.2 79 70.9
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 1.7e-23 112.5 82 67.1
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 5.0e-23 110.9 79 67.1
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 5.0e-23 110.9 82 72.0
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 6.5e-23 110.5 83 71.1
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 2.5e-22 108.6 83 63.9
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 2.5e-22 108.6 84 60.7
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 3.2e-22 108.2 78 67.9
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 4.2e-22 107.8 85 64.7
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 4.2e-22 107.8 84 59.5
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 4.2e-22 107.8 84 59.5
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 4.2e-22 107.8 79 69.6
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 7.2e-22 107.1 84 58.3
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 7.2e-22 107.1 82 68.3
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 7.2e-22 107.1 72 75.0
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 1.6e-21 105.9 84 58.3
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 2.1e-21 105.5 82 68.3
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 3.0e-20 101.7 104 60.6
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 4.0e-20 101.3 116 50.9
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 4.0e-20 101.3 78 62.8
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 6.8e-20 100.5 87 57.5
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 8.8e-20 100.1 87 57.5
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 5.7e-19 97.4 132 43.2
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 1.7e-18 95.9 83 49.4
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 1.4e-17 92.8 80 67.5
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 5.4e-17 90.9 89 51.7
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 4.7e-13 77.8 100 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 2.3e-12 75.5 79 50.6
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 5.2e-12 74.3 49 65.3
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 2.0e-11 72.4 50 70.0
Mapoly0013s0068 Marchantia polymorpha HOM05D008013 ORTHO05D010149 2.6e-11 72.0 82 45.1
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 2.2e-10 68.9 44 75.0
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 6.3e-10 67.4 42 73.8
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 1.8e-09 65.9 50 64.0
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 3.1e-09 65.1 63 50.8
ATR0609G113 Amborella trichopoda HOM05D008013 ORTHO05D010149 5.0e-07 57.8 50 48.0


User provided reference genes

Program Settings