Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 0.0e+00 1335.5 709 100.0
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 3.7e-302 1041.2 681 81.9
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 3.3e-295 1018.1 678 80.5
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 1.3e-291 1006.1 678 79.8
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 4.8e-270 934.5 683 74.2
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 1.3e-259 899.8 687 71.6
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 2.8e-193 679.5 683 61.5
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 3.2e-128 463.4 745 43.0
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 2.8e-124 450.3 618 45.6
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 5.8e-122 442.6 693 43.7
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 1.2e-119 434.9 739 41.4
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 7.8e-119 432.2 691 43.4
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 3.0e-110 403.7 697 41.3
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 1.1e-109 401.7 685 41.8
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 6.9e-107 392.5 718 40.1
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 4.4e-106 389.8 720 39.7
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 5.8e-106 389.4 707 39.3
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 1.3e-105 388.3 653 41.5
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 2.2e-105 387.5 714 39.6
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 6.4e-105 386.0 700 40.3
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 6.4e-105 386.0 716 40.1
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 8.4e-105 385.6 740 38.6
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 1.1e-104 385.2 724 39.1
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 3.2e-104 383.6 719 38.8
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 4.2e-104 383.3 737 38.5
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 4.2e-104 383.3 702 39.6
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 7.1e-104 382.5 666 41.3
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 2.7e-103 380.6 556 44.2
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 6.0e-103 379.4 617 42.9
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 7.9e-103 379.0 620 41.3
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 1.3e-102 378.3 707 40.3
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 3.0e-102 377.1 727 39.6
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 6.6e-102 375.9 710 40.0
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 2.5e-101 374.0 727 39.2
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 7.3e-101 372.5 785 35.8
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 7.3e-101 372.5 697 39.5
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 7.3e-101 372.5 702 39.3
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 9.6e-101 372.1 670 39.0
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 1.6e-100 371.3 660 41.1
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 1.1e-99 368.6 708 38.8
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 4.0e-99 366.7 708 38.7
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 2.6e-98 364.0 701 37.5
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 3.4e-98 363.6 535 44.9
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 1.7e-97 361.3 705 37.6
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 8.4e-97 359.0 732 38.1
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 9.3e-96 355.5 719 38.5
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 3.9e-94 350.1 655 38.6
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 2.5e-93 347.4 695 37.4
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 6.2e-92 342.8 699 36.9
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 1.8e-91 341.3 389 49.1
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 3.1e-91 340.5 691 36.5
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 2.0e-90 337.8 517 42.6
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 1.0e-89 335.5 689 37.7
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 4.9e-89 333.2 509 42.8
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 1.4e-88 331.6 668 36.4
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 1.9e-88 331.3 658 38.9
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 2.5e-88 330.9 518 42.3
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 6.0e-87 326.2 519 41.4
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 1.9e-85 321.2 659 36.6
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 1.3e-84 318.5 513 40.9
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 1.3e-84 318.5 523 43.6
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 8.2e-84 315.8 533 40.5
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 8.2e-84 315.8 696 35.8
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 2.4e-83 314.3 501 41.1
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 9.0e-83 312.4 721 35.2
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 3.4e-82 310.5 547 39.3
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 3.4e-82 310.5 674 35.0
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 4.5e-82 310.1 504 40.3
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 4.5e-82 310.1 678 36.9
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 1.0e-81 308.9 742 34.8
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 3.8e-81 307.0 690 35.4
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 5.0e-81 306.6 443 42.9
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 1.4e-80 305.1 498 40.2
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 1.6e-79 301.6 490 40.4
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 4.6e-79 300.1 687 35.1
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 4.6e-79 300.1 673 33.9
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 4.6e-79 300.1 673 33.9
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 1.0e-78 298.9 645 35.7
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 3.9e-78 297.0 681 35.8
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 8.7e-78 295.8 497 42.3
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 3.3e-77 293.9 533 38.1
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 1.8e-75 288.1 674 34.1
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 2.9e-73 280.8 399 45.4
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 8.5e-65 252.7 737 31.5
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 4.2e-64 250.4 425 40.2
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 2.1e-63 248.1 496 37.5
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 4.1e-59 233.8 280 50.4
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 6.1e-55 219.9 417 39.6
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 4.0e-54 217.2 685 31.8
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 2.2e-52 211.5 367 37.3
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 2.2e-49 201.4 217 53.5
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 6.5e-49 199.9 476 36.3
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 5.7e-45 186.8 454 32.6
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 2.8e-44 184.5 524 30.7
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 4.8e-44 183.7 512 32.8
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 6.3e-44 183.3 343 34.7
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 3.1e-43 181.0 534 28.8
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 9.1e-43 179.5 428 34.8
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 1.0e-41 176.0 531 29.9
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 1.5e-40 172.2 362 37.8
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 1.4e-38 165.6 363 34.7
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 1.8e-38 165.2 302 39.4
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 4.4e-37 160.6 375 35.7
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 1.0e-33 149.4 346 34.7
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 9.5e-32 142.9 350 30.6
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 8.9e-30 136.3 144 57.6
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 3.4e-29 134.4 341 37.0
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 1.4e-27 129.0 282 35.5
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 5.4e-27 127.1 236 36.0
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 1.5e-24 119.0 210 44.3
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 2.3e-22 111.7 120 57.5
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 8.9e-22 109.8 116 57.8
RcHm_v2.0_Chr3g0448831 Rosa chinensis HOM05D006063 ORTHO05D000023 8.1e-15 86.7 166 38.0
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 1.8e-14 85.5 80 58.8
MBI18_g46978_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 3.7e-12 77.8 188 33.0
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 1.0e-09 69.7 349 26.6
BcaC05g30213 Brassica carinata HOM05D006063 ORTHO05D000023 1.7e-09 68.9 47 74.5
C05p62930 Brassica napus HOM05D000005 ORTHO05D000294 3.9e-09 67.8 118 38.1
unitig_46.g17983 Utricularia gibba HOM05D006063 ORTHO05D000023 3.9e-09 67.8 146 40.4
Dinv03782 Davidia involucrata HOM05D006063 ORTHO05D045148 3.3e-08 64.7 43 74.4
Dinv03778 Davidia involucrata HOM05D006063 ORTHO05D045100 1.2e-07 62.8 249 29.7
Hma1.2p1_0153F.1_g067860 Hydrangea macrophylla HOM05D006063 ORTHO05D045100 2.3e-06 58.5 197 31.5


User provided reference genes

Program Settings