Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 3.4e-40 167.9 88 100.0
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 3.0e-20 101.7 90 66.7
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 2.5e-19 98.6 90 63.3
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 5.7e-19 97.4 90 65.6
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 6.5e-15 84.0 81 60.5
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 8.5e-15 83.6 79 58.2
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 4.2e-14 81.3 75 58.7
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 6.1e-13 77.4 75 57.3
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 7.9e-13 77.0 74 59.5
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 7.9e-13 77.0 87 49.4
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.4e-12 76.3 83 51.8
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 6.7e-12 73.9 68 54.4
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 6.7e-12 73.9 56 62.5
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 6.7e-12 73.9 91 49.5
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 8.8e-12 73.6 83 54.2
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 8.8e-12 73.6 60 56.7
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 1.5e-11 72.8 73 53.4
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 5.7e-11 70.9 67 56.7
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 5.7e-11 70.9 83 48.2
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 5.7e-11 70.9 62 56.5
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 7.4e-11 70.5 64 54.7
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 1.3e-10 69.7 59 57.6
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 2.8e-10 68.6 101 39.6
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 2.8e-10 68.6 68 50.0
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 4.8e-10 67.8 76 47.4
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 4.8e-10 67.8 76 47.4
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 4.8e-10 67.8 89 43.8
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 4.8e-10 67.8 61 54.1
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 6.3e-10 67.4 63 55.6
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 6.3e-10 67.4 86 47.7
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 8.2e-10 67.0 80 43.8
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 1.1e-09 66.6 71 47.9
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 1.4e-09 66.2 66 50.0
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.4e-09 66.2 77 44.2
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 2.4e-09 65.5 81 45.7
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 2.4e-09 65.5 53 60.4
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 3.1e-09 65.1 58 55.2
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 3.1e-09 65.1 80 45.0
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 4.1e-09 64.7 89 42.7
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 5.3e-09 64.3 83 47.0
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 6.9e-09 63.9 55 58.2
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 6.9e-09 63.9 82 43.9
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 6.9e-09 63.9 66 48.5
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 6.9e-09 63.9 101 40.6
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 9.1e-09 63.5 63 50.8
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 9.1e-09 63.5 63 50.8
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 9.1e-09 63.5 63 50.8
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 1.2e-08 63.2 91 39.6
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 1.2e-08 63.2 54 55.6
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.2e-08 63.2 85 45.9
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.5e-08 62.8 77 48.1
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 2.0e-08 62.4 64 51.6
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.0e-08 62.4 63 50.8
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 2.0e-08 62.4 80 43.8
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 2.6e-08 62.0 82 43.9
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 2.6e-08 62.0 56 51.8
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 3.4e-08 61.6 73 45.2
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 7.7e-08 60.5 62 51.6
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 7.7e-08 60.5 62 56.5
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 7.7e-08 60.5 58 51.7
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 1.3e-07 59.7 65 46.2
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 1.3e-07 59.7 90 40.0
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 1.7e-07 59.3 54 50.0
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 2.2e-07 58.9 59 52.5
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 2.9e-07 58.5 60 50.0
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 3.8e-07 58.2 76 42.1
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 3.8e-07 58.2 54 57.4
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 5.0e-07 57.8 67 47.8
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 5.0e-07 57.8 90 42.2
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 5.0e-07 57.8 81 45.7
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 6.5e-07 57.4 87 40.2
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 8.5e-07 57.0 77 39.0
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 1.1e-06 56.6 67 52.2
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 1.1e-06 56.6 52 59.6
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 1.1e-06 56.6 63 49.2
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 1.9e-06 55.8 83 41.0
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 1.9e-06 55.8 99 40.4
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 2.5e-06 55.5 67 44.8
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 2.5e-06 55.5 78 42.3
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 2.5e-06 55.5 90 37.8
CDE10G0699 Ceratophyllum demersum HOM05D007413 ORTHO05D009357 4.2e-06 54.7 51 52.9
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 4.2e-06 54.7 90 37.8
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 5.5e-06 54.3 78 46.2
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 7.2e-06 53.9 78 41.0
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 7.2e-06 53.9 78 41.0


User provided reference genes

Program Settings