Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 3.0e-197 691.8 386 100.0
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 2.2e-99 366.7 356 64.9
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 3.2e-98 362.8 356 64.3
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 3.4e-92 342.8 349 61.6
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 3.4e-92 342.8 349 61.6
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.7e-88 330.5 402 56.5
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 2.1e-73 280.4 303 58.7
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.0e-39 167.5 373 39.7
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 4.8e-38 162.9 368 38.0
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 3.6e-33 146.7 374 36.9
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 6.1e-33 146.0 383 36.6
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.0e-33 145.6 375 37.6
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 1.0e-32 145.2 367 37.9
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 3.9e-32 143.3 375 37.3
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 3.9e-32 143.3 347 38.0
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.7e-32 142.5 374 36.4
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 1.7e-30 137.9 374 36.1
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.8e-30 136.3 374 35.8
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 4.1e-29 133.3 378 35.4
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 5.3e-29 132.9 351 33.6
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 7.0e-29 132.5 374 34.2
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 1.2e-28 131.7 381 34.9
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.6e-28 131.3 406 34.5
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 2.0e-28 131.0 348 38.2
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 2.6e-28 130.6 373 36.2
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 3.5e-28 130.2 377 36.3
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 3.5e-28 130.2 332 39.2
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 5.9e-28 129.4 316 35.8
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 7.7e-28 129.0 207 43.5
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 1.7e-27 127.9 366 32.8
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 2.2e-27 127.5 366 32.5
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 2.2e-27 127.5 393 35.1
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 1.1e-26 125.2 347 33.7
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 2.5e-26 124.0 362 34.3
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 3.2e-26 123.6 369 34.4
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 3.2e-26 123.6 208 44.7
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 5.5e-26 122.9 197 45.2
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 7.2e-26 122.5 269 37.5
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 9.4e-26 122.1 372 36.6
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 1.6e-25 121.3 360 34.4
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 1.6e-25 121.3 344 34.6
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.6e-25 121.3 356 34.8
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.7e-25 119.8 366 35.2
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 6.1e-25 119.4 187 44.9
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 6.1e-25 119.4 354 33.1
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 8.0e-25 119.0 208 43.8
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 1.0e-24 118.6 369 36.0
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 1.4e-24 118.2 220 44.1
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 1.4e-24 118.2 357 34.2
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 1.8e-24 117.9 354 35.0
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 4.0e-24 116.7 348 31.9
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 4.0e-24 116.7 351 35.0
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 4.0e-24 116.7 228 38.6
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 4.0e-24 116.7 329 35.9
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 5.2e-24 116.3 327 35.8
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 6.7e-24 115.9 369 33.6
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 6.7e-24 115.9 343 33.5
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 8.8e-24 115.5 376 35.1
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.2e-23 115.2 374 34.5
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.5e-23 114.8 364 35.2
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 1.5e-23 114.8 378 33.6
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 3.3e-23 113.6 365 33.7
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 5.7e-23 112.8 189 44.4
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 7.5e-23 112.5 337 31.8
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 9.7e-23 112.1 342 35.1
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 1.3e-22 111.7 364 34.3
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.7e-22 111.3 356 34.3
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 6.3e-22 109.4 346 32.7
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 8.2e-22 109.0 187 41.2
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 1.1e-21 108.6 337 32.9
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.4e-21 108.2 375 33.6
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 1.4e-21 108.2 370 33.5
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 1.8e-21 107.8 329 32.2
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 2.4e-21 107.5 255 39.2
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 3.1e-21 107.1 379 33.2
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 9.1e-21 105.5 356 30.6
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 2.7e-20 104.0 380 33.7
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 5.9e-20 102.8 152 46.7
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 3.8e-19 100.1 111 55.9
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 6.5e-19 99.4 392 31.6
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 6.5e-19 99.4 327 30.9
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 8.5e-19 99.0 228 38.6
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 1.9e-18 97.8 371 31.8
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 1.9e-18 97.8 133 48.1
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 3.2e-18 97.1 90 63.3
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 2.7e-17 94.0 228 39.0
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 3.6e-17 93.6 132 47.7
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 6.1e-17 92.8 370 31.9
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 4.0e-16 90.1 340 30.3
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 8.8e-16 89.0 349 30.7
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 2.6e-15 87.4 93 57.0
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 4.4e-15 86.7 347 32.0
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 4.4e-15 86.7 145 46.2
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 5.7e-15 86.3 343 30.9
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 7.5e-15 85.9 334 31.1
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 9.8e-15 85.5 394 30.2
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 3.7e-14 83.6 84 57.1
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 8.3e-14 82.4 343 31.2
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 1.8e-13 81.3 94 58.5
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 2.4e-13 80.9 419 26.7
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 7.0e-13 79.3 316 31.6
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 7.0e-13 79.3 206 40.8
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 1.6e-12 78.2 195 36.4
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 2.7e-12 77.4 139 39.6
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 4.5e-12 76.6 135 39.3
unitig_22.g5122 Utricularia gibba HOM05D005512 ORTHO05D006716 1.0e-11 75.5 189 36.0
Zm00001eb406920 Zea mays HOM05D005512 ORTHO05D006716 1.3e-11 75.1 71 63.4
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 5.0e-11 73.2 135 39.3
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 1.2e-09 68.6 333 29.7
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 2.3e-08 64.3 144 38.9
SMO351G0354 Selaginella moellendorffii HOM05D005512 ORTHO05D006716 5.2e-08 63.2 81 54.3
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 2.0e-07 61.2 319 27.9
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 2.6e-07 60.8 147 38.1
DCAR_009151 Daucus carota HOM05D005512 ORTHO05D006716 9.8e-07 58.9 325 28.0
TPR.G19527 Trifolium pratense HOM05D005512 ORTHO05D006716 1.3e-06 58.5 365 28.5
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 8.3e-06 55.8 80 48.8


User provided reference genes

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