Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G394.39 Capsicum annuum HOM05D008565 ORTHO05D011266 9.3e-104 380.6 245 100.0
CAN.G394.29 Capsicum annuum HOM05D008565 ORTHO05D011266 4.9e-20 102.4 104 53.8
PGSC0003DMG400041447 Solanum tuberosum HOM05D012723 ORTHO05D011266 1.2e-18 97.8 124 44.4
Nitab4.5_0001304g0010 Nicotiana tabacum HOM05D008565 ORTHO05D011266 3.3e-16 89.7 99 47.5
Nitab4.5_0009655g0020 Nicotiana tabacum HOM05D008565 ORTHO05D011266 1.2e-15 87.8 101 44.6
Solyc04g057910.4 Solanum lycopersicum HOM05D008565 ORTHO05D018131 6.2e-15 85.5 110 45.5
Sopen04g025770 Solanum pennellii HOM05D008565 ORTHO05D018131 6.2e-15 85.5 110 45.5
PGSC0003DMG400041339 Solanum tuberosum HOM05D008565 ORTHO05D011266 6.2e-15 85.5 110 44.5
CAN.G394.31 Capsicum annuum HOM05D008565 ORTHO05D011266 1.5e-13 80.9 114 43.0
CAN.G394.36 Capsicum annuum HOM05D012723 ORTHO05D011266 9.9e-13 78.2 106 44.3
PGSC0003DMG400036779 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.3e-12 77.8 123 39.8
Solyc06g075820.1 Solanum lycopersicum HOM05D008565 ORTHO05D011266 2.2e-12 77.0 120 40.0
PGSC0003DMG400043572 Solanum tuberosum HOM05D008565 ORTHO05D011266 2.2e-12 77.0 131 40.5
PGSC0003DMG400039447 Solanum tuberosum HOM05D008565 ORTHO05D021008 2.9e-12 76.6 117 38.5
Sopen06g032250 Solanum pennellii HOM05D008565 ORTHO05D011266 1.4e-11 74.3 112 39.3
Solyc06g075920.2 Solanum lycopersicum HOM05D008565 ORTHO05D026158 2.4e-11 73.6 109 43.1
PGSC0003DMG400045398 Solanum tuberosum HOM05D008565 ORTHO05D017126 3.2e-11 73.2 109 38.5
Solyc04g057920.1 Solanum lycopersicum HOM05D008565 ORTHO05D018131 5.4e-11 72.4 112 37.5
Sopen06g032190 Solanum pennellii HOM05D008565 ORTHO05D051169 5.4e-11 72.4 113 36.3
PGSC0003DMG400039884 Solanum tuberosum HOM05D008565 ORTHO05D018131 5.4e-11 72.4 105 38.1
PGSC0003DMG400045046 Solanum tuberosum HOM05D008565 ORTHO05D017126 5.4e-11 72.4 158 33.5
Solyc06g075880.1 Solanum lycopersicum HOM05D008565 ORTHO05D021008 9.3e-11 71.6 123 40.7
Sopen04g025780 Solanum pennellii HOM05D008565 ORTHO05D018131 9.3e-11 71.6 107 38.3
PGSC0003DMG400039648 Solanum tuberosum HOM05D008565 ORTHO05D017126 1.2e-10 71.2 104 37.5
PGSC0003DMG400044843 Solanum tuberosum HOM05D008565 ORTHO05D017126 2.1e-10 70.5 123 38.2
Sopen06g032110 Solanum pennellii HOM05D008565 ORTHO05D017126 3.5e-10 69.7 110 38.2
Solyc06g075720.3 Solanum lycopersicum HOM05D008565 ORTHO05D017126 7.8e-10 68.6 109 35.8
Solyc03g115970.2 Solanum lycopersicum HOM05D008565 ORTHO05D021008 1.0e-09 68.2 128 41.4
Sopen06g032120 Solanum pennellii HOM05D008565 ORTHO05D017126 1.0e-09 68.2 109 35.8
Sopen06g032290 Solanum pennellii HOM05D008565 ORTHO05D021008 6.6e-09 65.5 118 39.0
Sopen06g032100 Solanum pennellii HOM05D012723 ORTHO05D011266 1.1e-08 64.7 126 38.9
Actinidia37222 Actinidia chinensis HOM05D010595 ORTHO05D011290 1.5e-08 64.3 74 39.2
Peaxi162Scf00679g00136 Petunia axillaris HOM05D008565 ORTHO05D011266 1.5e-08 64.3 68 47.1
Solyc06g075890.1 Solanum lycopersicum HOM05D012723 ORTHO05D011266 2.5e-08 63.5 102 42.2
Solyc06g075770.1 Solanum lycopersicum HOM05D008565 ORTHO05D051169 4.3e-08 62.8 113 32.7
Sopen03g034960 Solanum pennellii HOM05D008565 ORTHO05D021008 4.3e-08 62.8 124 38.7
Sopen06g032180 Solanum pennellii HOM05D008565 ORTHO05D011266 4.3e-08 62.8 123 35.0
CAN.G394.27 Capsicum annuum HOM05D008565 ORTHO05D011266 5.6e-08 62.4 143 34.3
Peaxi162Scf00679g00129 Petunia axillaris HOM05D044200 ORTHO05D011266 7.3e-08 62.0 67 38.8
Solyc06g075900.1 Solanum lycopersicum HOM05D035698 ORTHO05D011266 2.1e-07 60.5 101 40.6
Actinidia37221 Actinidia chinensis HOM05D010595 ORTHO05D011290 3.6e-07 59.7 109 31.2
Sopen06g032300 Solanum pennellii HOM05D035698 ORTHO05D011266 4.8e-07 59.3 101 39.6
CAN.G394.32 Capsicum annuum HOM05D012723 ORTHO05D011266 5.3e-06 55.8 100 36.0
Actinidia07052 Actinidia chinensis HOM05D010595 ORTHO05D011290 9.0e-06 55.1 76 39.5


User provided reference genes

Program Settings