Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 0.0e+00 1181.4 619 100.0
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 5.7e-267 924.1 568 87.0
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 5.9e-264 914.1 574 85.5
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 2.7e-261 905.2 637 79.6
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 1.8e-260 902.5 573 85.2
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 4.0e-236 821.6 577 79.5
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 4.9e-210 734.9 560 73.0
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 8.4e-210 734.2 595 69.6
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 4.6e-208 728.4 581 69.5
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 1.5e-206 723.4 564 69.7
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 3.3e-206 722.2 499 74.7
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 7.4e-206 721.1 561 69.3
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 2.1e-205 719.5 573 68.2
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 4.8e-205 718.4 564 69.5
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 8.1e-205 717.6 536 72.8
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 1.8e-204 716.5 575 69.0
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 5.3e-204 714.9 575 69.0
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 2.0e-203 713.0 575 68.9
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 4.5e-203 711.8 566 68.0
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 5.8e-203 711.4 575 68.7
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 7.6e-203 711.1 565 69.0
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 3.8e-202 708.8 577 67.9
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 6.0e-200 701.4 577 66.4
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 1.3e-199 700.3 601 65.1
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 3.9e-199 698.7 565 67.6
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 1.5e-198 696.8 575 67.0
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 1.3e-197 693.7 564 67.2
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 1.6e-197 693.3 497 72.4
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.8e-196 689.9 564 67.0
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 1.5e-195 686.8 511 71.6
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 1.5e-195 686.8 508 71.9
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 1.5e-195 686.8 478 74.9
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 7.6e-195 684.5 555 66.5
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 1.0e-194 684.1 576 64.8
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 2.2e-194 682.9 571 65.1
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 2.9e-194 682.6 565 67.3
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 8.4e-194 681.0 561 67.2
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 1.4e-193 680.2 576 64.6
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 9.3e-193 677.6 568 62.9
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 3.0e-191 672.5 578 63.1
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 3.3e-190 669.1 576 64.1
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 1.6e-189 666.8 508 66.9
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 1.8e-188 663.3 510 68.8
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 6.9e-188 661.4 510 68.6
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 1.5e-187 660.2 512 68.6
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 2.6e-187 659.4 510 68.2
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 2.6e-187 659.4 524 66.8
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 4.5e-187 658.7 509 68.6
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 2.2e-186 656.4 510 66.3
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 1.1e-185 654.1 636 60.7
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 1.1e-185 654.1 538 66.2
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 2.5e-185 652.9 550 63.1
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 1.8e-183 646.7 499 66.9
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 3.0e-183 646.0 540 64.1
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 6.7e-183 644.8 526 65.2
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 1.1e-182 644.0 577 63.4
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 4.3e-182 642.1 492 67.3
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 9.7e-182 641.0 511 66.7
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 1.3e-181 640.6 557 61.8
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 1.6e-181 640.2 586 61.1
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 1.8e-180 636.7 529 65.4
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 3.1e-180 636.0 580 59.8
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 6.9e-180 634.8 580 60.7
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 9.1e-180 634.4 575 63.1
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 1.2e-179 634.0 519 64.5
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 2.0e-179 633.3 493 66.1
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 2.0e-179 633.3 595 58.3
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 7.7e-179 631.3 567 61.9
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 1.1e-177 627.5 446 74.0
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 5.5e-177 625.2 531 65.9
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 1.4e-175 620.5 580 60.5
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 3.9e-175 619.0 582 60.1
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 1.5e-174 617.1 627 59.0
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 1.4e-172 610.5 608 58.6
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 9.4e-169 597.8 515 62.9
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 8.8e-167 591.3 586 57.2
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 1.5e-166 590.5 521 60.1
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 2.4e-164 583.2 477 64.8
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 1.5e-161 573.9 605 54.4
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 4.8e-157 558.9 514 60.7
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 5.3e-156 555.4 510 58.8
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 1.7e-154 550.4 503 58.8
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 1.1e-153 547.7 470 61.3
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 1.6e-152 543.9 548 57.8
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 2.7e-152 543.1 493 62.1
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 4.0e-151 539.3 528 58.5
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 1.6e-147 527.3 463 61.3
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 1.5e-142 510.8 615 53.7
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 8.3e-141 505.0 494 56.3
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 1.5e-134 484.2 324 76.2
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 2.3e-130 470.3 516 48.4
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 6.6e-130 468.8 502 48.8
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 1.8e-127 460.7 324 71.9
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.5e-118 431.0 395 57.7
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 1.3e-117 427.9 491 48.7
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 1.2e-94 351.7 517 42.4
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 3.5e-83 313.5 231 71.9
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 3.2e-60 237.3 533 33.8
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 9.7e-57 225.7 254 55.9
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.7e-53 214.9 198 54.0
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 5.5e-52 209.9 272 51.1
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 2.7e-51 207.6 183 58.5
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 3.0e-50 204.1 146 74.7
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 8.8e-50 202.6 277 49.1
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.1e-47 195.7 193 56.0
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 3.5e-46 190.7 189 56.1
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 7.2e-36 156.4 172 52.9
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 2.4e-31 141.4 118 64.4
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 3.6e-27 127.5 225 41.8
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 5.6e-20 103.6 71 84.5
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 3.0e-18 97.8 64 79.7
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 2.9e-08 64.7 118 35.6
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 6.4e-08 63.5 118 34.7


User provided reference genes

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