Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 1.2e-308 1062.4 532 100.0
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 4.2e-274 947.6 534 89.0
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 3.9e-272 941.0 534 88.2
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 7.6e-268 926.8 534 86.9
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 5.4e-266 920.6 534 87.1
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 9.1e-221 770.4 533 76.5
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 8.3e-198 694.1 533 65.1
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 5.9e-196 688.0 544 68.0
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 1.4e-189 666.8 542 62.7
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 3.5e-188 662.1 548 62.6
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 2.8e-185 652.5 535 63.0
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 2.3e-184 649.4 535 61.9
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 3.1e-184 649.0 533 67.2
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 1.9e-181 639.8 539 59.4
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 2.4e-181 639.4 555 58.6
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 2.4e-181 639.4 494 63.6
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 7.0e-181 637.9 540 59.3
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 6.0e-180 634.8 536 60.8
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 3.9e-179 632.1 533 59.7
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 6.6e-179 631.3 542 58.7
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 8.6e-179 630.9 538 60.2
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 1.1e-178 630.6 531 59.3
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 1.9e-178 629.8 533 60.2
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 3.3e-178 629.0 544 59.9
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 1.2e-177 627.1 538 58.9
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 1.5e-175 620.2 546 57.5
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 1.5e-175 620.2 537 61.5
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 1.5e-175 620.2 536 59.1
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 3.4e-175 619.0 499 62.9
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 2.9e-174 615.9 535 57.4
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 4.9e-174 615.1 530 58.7
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 1.1e-173 614.0 540 57.4
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 4.1e-173 612.1 532 59.6
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 5.4e-173 611.7 533 58.0
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 9.2e-173 610.9 531 59.7
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 9.2e-173 610.9 534 58.1
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 1.6e-172 610.1 537 57.7
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 1.7e-171 606.7 532 58.1
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 3.9e-171 605.5 535 57.8
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 8.6e-171 604.4 537 58.1
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 9.5e-170 600.9 532 59.4
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 9.5e-170 600.9 535 58.3
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 1.4e-168 597.0 531 58.8
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 1.4e-168 597.0 532 57.0
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 5.2e-168 595.1 540 57.0
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 6.8e-168 594.7 530 59.8
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 2.6e-167 592.8 535 57.4
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 7.6e-167 591.3 544 57.0
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 3.2e-165 585.9 533 58.0
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 3.9e-163 578.9 532 53.9
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 3.9e-163 578.9 531 53.3
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 5.1e-163 578.6 533 54.2
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 6.6e-163 578.2 529 55.6
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 1.1e-162 577.4 534 55.6
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 3.3e-162 575.9 530 53.4
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 1.6e-161 573.5 532 53.8
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 2.8e-161 572.8 536 55.6
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 6.2e-161 571.6 533 53.3
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 1.1e-160 570.9 528 53.6
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 1.8e-160 570.1 529 57.5
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 3.1e-160 569.3 529 57.3
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 4.0e-160 568.9 528 53.4
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 1.2e-159 567.4 520 56.3
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 2.0e-159 566.6 531 52.9
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 4.9e-158 562.0 532 54.3
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 4.9e-158 562.0 535 53.3
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 4.9e-158 562.0 534 53.4
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 6.4e-158 561.6 535 52.1
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 9.3e-157 557.8 534 51.7
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 1.0e-155 554.3 533 51.4
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 3.9e-155 552.4 572 51.7
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 1.1e-154 550.8 534 52.8
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 1.9e-154 550.1 534 52.8
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 2.5e-154 549.7 634 49.7
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 2.5e-154 549.7 756 42.6
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 8.1e-153 544.7 533 53.8
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 1.8e-152 543.5 531 52.7
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 9.0e-152 541.2 532 54.9
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 2.0e-151 540.0 482 56.8
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 7.6e-151 538.1 530 51.7
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.9e-150 536.2 529 55.0
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 2.7e-148 529.6 486 55.1
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 1.7e-147 526.9 367 69.5
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 7.3e-146 521.5 534 53.2
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.8e-145 519.6 529 54.4
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 4.9e-142 508.8 473 54.8
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 1.1e-141 507.7 488 53.5
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 9.6e-138 494.6 521 51.1
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 5.0e-126 455.7 439 52.6
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 6.7e-123 445.3 532 44.4
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 6.5e-110 402.1 531 40.7
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 7.2e-109 398.7 532 42.1
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 1.6e-108 397.5 471 47.3
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 2.9e-102 376.7 294 62.6
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 7.5e-98 362.1 259 69.1
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 9.7e-98 361.7 353 52.1
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 3.6e-92 343.2 268 64.6
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 4.8e-89 332.8 258 65.5
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 3.5e-87 326.6 282 58.9
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 1.3e-81 308.1 527 36.2
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 1.6e-76 291.2 280 55.4
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 7.8e-71 272.3 498 35.3
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 1.1e-69 268.5 202 64.4
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.2e-65 254.2 261 53.3
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 5.4e-64 249.6 313 46.6
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 2.4e-56 224.2 274 44.5
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 3.2e-56 223.8 441 36.7
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 1.0e-54 218.8 267 46.8
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.9e-53 214.5 176 59.7
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 8.4e-49 199.1 191 56.5
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.4e-40 171.8 282 39.0
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 3.0e-38 164.1 424 30.0
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 2.1e-36 157.9 123 67.5
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.1e-29 135.6 123 56.9
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.3e-22 111.3 111 54.1
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 1.3e-20 105.5 474 25.9
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 6.9e-19 99.8 152 38.8
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 1.8e-11 75.1 332 22.6
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 1.2e-10 72.4 109 39.4
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 1.2e-10 72.4 109 39.4
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 1.5e-10 72.0 126 35.7
Lsat_1_v5_gn_2_91241 Lactuca sativa HOM05D006671 ORTHO05D011576 1.3e-09 68.9 114 37.7
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 2.2e-09 68.2 335 22.7
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 3.8e-09 67.4 118 33.9
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 4.2e-08 63.9 336 22.0
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 4.2e-08 63.9 346 20.5
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 2.1e-07 61.6 395 20.8
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 4.6e-07 60.5 332 23.5
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 4.6e-07 60.5 403 22.1
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 6.7e-06 56.6 339 21.2


User provided reference genes

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