Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 9.2e-81 303.5 155 100.0
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 4.9e-26 121.7 72 88.9
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 4.9e-26 121.7 72 88.9
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 1.9e-25 119.8 72 87.5
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 1.9e-25 119.8 72 87.5
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 1.9e-25 119.8 72 87.5
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 1.9e-25 119.8 72 87.5
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 1.9e-25 119.8 72 87.5
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 1.9e-25 119.8 72 87.5
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 1.9e-25 119.8 72 87.5
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 1.9e-25 119.8 72 87.5
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 1.9e-25 119.8 72 87.5
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 2.5e-25 119.4 72 87.5
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.5e-25 119.4 72 87.5
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.5e-25 119.4 72 87.5
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 4.2e-25 118.6 72 87.5
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 4.2e-25 118.6 72 86.1
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 4.2e-25 118.6 72 87.5
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 9.3e-25 117.5 72 86.1
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 9.3e-25 117.5 72 86.1
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 2.1e-24 116.3 72 86.1
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 2.1e-24 116.3 71 84.5
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 2.7e-24 115.9 72 86.1
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 4.6e-24 115.2 72 84.7
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 6.0e-24 114.8 72 83.3
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 1.0e-23 114.0 68 86.8
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 1.3e-23 113.6 68 86.8
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 3.0e-23 112.5 68 86.8
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 3.0e-23 112.5 68 86.8
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 5.1e-23 111.7 72 80.6
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.7e-23 111.3 72 81.9
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 1.1e-22 110.5 68 85.3
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 1.5e-22 110.2 68 85.3
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 5.7e-22 108.2 68 83.8
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 9.6e-22 107.5 71 80.3
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 9.6e-22 107.5 72 81.9
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.8e-21 105.9 72 77.8
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 3.7e-21 105.5 71 76.1
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 8.2e-21 104.4 68 79.4
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 6.5e-18 94.7 71 71.8
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.1e-17 94.0 58 84.5
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 2.5e-17 92.8 56 85.7
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 1.6e-16 90.1 51 88.2
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.7e-16 89.4 54 85.2
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 4.6e-16 88.6 53 86.8
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 2.3e-15 86.3 48 95.8
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 3.0e-15 85.9 51 84.3
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 3.0e-15 85.9 51 84.3
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 3.0e-15 85.9 51 84.3
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 3.0e-15 85.9 51 84.3
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 3.0e-15 85.9 51 84.3
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 1.9e-14 83.2 72 66.7
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.7e-14 81.6 63 74.6
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 9.7e-14 80.9 100 54.0
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 4.8e-13 78.6 53 77.4
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 2.4e-12 76.3 43 86.0
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 2.4e-12 76.3 43 86.0
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 2.4e-12 76.3 43 86.0
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 3.1e-12 75.9 49 77.6
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 4.1e-12 75.5 44 84.1
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 3.4e-11 72.4 43 81.4
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 4.5e-11 72.0 43 81.4
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.0e-10 70.9 45 77.8
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 1.0e-10 70.9 40 92.5
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 4.6e-08 62.0 56 57.1
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 1.8e-07 60.1 60 60.0
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 1.8e-07 60.1 40 75.0
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 1.8e-07 60.1 53 60.4
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 6.7e-07 58.2 44 63.6
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 1.1e-06 57.4 36 75.0
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 7.4e-06 54.7 44 68.2


User provided reference genes

Program Settings