Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G39.12 Capsicum annuum HOM05D005318 ORTHO05D006791 1.2e-205 719.5 349 100.0
Nitab4.5_0001388g0020 Nicotiana tabacum HOM05D005318 ORTHO05D006791 1.2e-123 447.2 281 79.7
Sopen02g004490 Solanum pennellii HOM05D005318 ORTHO05D006791 4.4e-123 445.3 225 94.2
Nitab4.5_0000092g0020 Nicotiana tabacum HOM05D005318 ORTHO05D006791 3.7e-122 442.2 301 74.8
Solyc02g020980.4 Solanum lycopersicum HOM05D005318 ORTHO05D006791 7.0e-121 438.0 225 92.4
Peaxi162Scf01017g00016 Petunia axillaris HOM05D005318 ORTHO05D006791 6.6e-119 431.4 293 74.7
Migut.K00161 Erythranthe guttata HOM05D005318 ORTHO05D006791 1.0e-111 407.5 290 68.6
Sopen02g004780 Solanum pennellii HOM05D005318 ORTHO05D006791 1.3e-111 407.1 203 94.1
Glyma.19G125800 Glycine max HOM05D005318 ORTHO05D006791 2.3e-111 406.4 293 67.9
Glyma.03G121100 Glycine max HOM05D005318 ORTHO05D006791 8.6e-111 404.4 293 68.6
QL07p013739 Quercus lobata HOM05D005318 ORTHO05D006791 1.1e-110 404.1 290 67.6
arahy.Tifrunner.gnm1.ann1.HZCB2X Arachis hypogaea HOM05D005318 ORTHO05D006791 2.5e-110 402.9 293 68.3
arahy.Tifrunner.gnm1.ann1.PFNU0X Arachis hypogaea HOM05D005318 ORTHO05D006791 2.5e-110 402.9 293 68.3
Sc19g0007930 Simmondsia chinensis HOM05D005318 ORTHO05D006791 5.6e-110 401.7 290 67.2
Atru.chr1.1378 Acer truncatum HOM05D005318 ORTHO05D006791 1.6e-109 400.2 290 66.2
Aqoxy1G00050 Aquilegia oxysepala HOM05D005318 ORTHO05D006791 2.1e-109 399.8 292 65.4
CSS0014915 Camellia sinensis var. sinensis HOM05D005318 ORTHO05D006791 2.8e-109 399.4 225 81.8
Phvul.001G117700 Phaseolus vulgaris HOM05D005318 ORTHO05D006791 3.6e-109 399.1 293 67.6
Thecc.05G118400 Theobroma cacao HOM05D005318 ORTHO05D006791 4.7e-109 398.7 292 65.4
DCAR_013530 Daucus carota HOM05D005318 ORTHO05D006791 4.0e-108 395.6 235 78.7
Actinidia37854 Actinidia chinensis HOM05D005318 ORTHO05D006791 5.2e-108 395.2 290 67.2
Manes.08G162200 Manihot esculenta HOM05D005318 ORTHO05D006791 5.2e-108 395.2 290 66.2
Psat0s698g0160 Pisum sativum HOM05D005318 ORTHO05D006791 5.2e-108 395.2 293 65.2
Medtr7g088740 Medicago truncatula HOM05D005318 ORTHO05D006791 1.2e-107 394.0 293 65.9
Potri.016G028900 Populus trichocarpa HOM05D005318 ORTHO05D006791 1.5e-107 393.7 290 66.6
Ca_08698_v3 Cicer arietinum L. HOM05D005318 ORTHO05D006791 2.0e-107 393.3 295 65.4
Lj1g0025305 Lotus japonicus HOM05D005318 ORTHO05D006791 2.6e-107 392.9 290 66.2
MD00G1025200 Malus domestica HOM05D005318 ORTHO05D006791 3.4e-107 392.5 290 65.9
COL.COLO4_33519 Corchorus olitorius HOM05D005318 ORTHO05D006791 4.4e-107 392.1 225 78.7
Cc06_g21270 Coffea canephora HOM05D005318 ORTHO05D006791 7.5e-107 391.3 295 64.7
CARHR135960 Cardamine hirsuta HOM05D005318 ORTHO05D006791 9.8e-107 391.0 290 65.5
Sabra06G0021100 Salix brachista HOM05D005318 ORTHO05D006791 9.8e-107 391.0 290 65.9
Duzib128G1115 Durio zibethinus HOM05D005318 ORTHO05D006791 1.3e-106 390.6 292 64.4
ECA236G3220 Erigeron canadensis HOM05D005318 ORTHO05D006791 2.2e-106 389.8 290 66.9
Gorai.010G128900 Gossypium raimondii HOM05D005318 ORTHO05D006791 2.2e-106 389.8 292 63.7
Prupe.7G019400 Prunus persica HOM05D005318 ORTHO05D006791 2.9e-106 389.4 290 64.8
Lsat_1_v5_gn_8_83900 Lactuca sativa HOM05D005318 ORTHO05D006791 4.9e-106 388.7 225 79.1
Carub.0004s2316 Capsella rubella HOM05D005318 ORTHO05D006791 6.4e-106 388.3 292 64.7
Gohir.D06G113100 Gossypium hirsutum HOM05D005318 ORTHO05D006791 6.4e-106 388.3 292 63.4
TAR633G2118 Trochodendron aralioides HOM05D005318 ORTHO05D006791 6.4e-106 388.3 292 65.1
Thhalv10016195m.g Eutrema salsugineum HOM05D005318 ORTHO05D006791 1.1e-105 387.5 290 65.5
vmacro07764 Vaccinium macrocarpon HOM05D005318 ORTHO05D006791 1.9e-105 386.7 234 77.4
RhsimUnG0019600 Rhododendron simsii HOM05D005318 ORTHO05D006791 3.2e-105 386.0 290 65.9
Gohir.A06G109000 Gossypium hirsutum HOM05D005318 ORTHO05D006791 4.1e-105 385.6 292 63.7
Lj2A411T33 Lonicera japonica HOM05D005318 ORTHO05D006791 1.2e-104 384.0 298 64.4
Potri.006G031700 Populus trichocarpa HOM05D005318 ORTHO05D006791 1.2e-104 384.0 290 64.5
Os07g0662900 Oryza sativa ssp. japonica HOM05D005318 ORTHO05D006791 2.0e-104 383.3 293 62.5
Aa31LG3G1260 Aethionema arabicum HOM05D005318 ORTHO05D006791 2.7e-104 382.9 293 64.2
Sabra16G0033000 Salix brachista HOM05D005318 ORTHO05D006791 2.7e-104 382.9 225 78.7
BraA05t19191Z Brassica rapa HOM05D005318 ORTHO05D006791 4.6e-104 382.1 290 63.1
C04p02280 Brassica napus HOM05D005318 ORTHO05D006791 6.0e-104 381.7 290 63.1
BolC4t21874H Brassica oleracea HOM05D005318 ORTHO05D006791 6.0e-104 381.7 290 63.1
Cpa.g.sc92.60 Carica papaya HOM05D005318 ORTHO05D006791 6.0e-104 381.7 290 64.8
HanXRQChr06g0177301 Helianthus annuus HOM05D005318 ORTHO05D006791 6.0e-104 381.7 290 63.1
A05p01930 Brassica napus HOM05D005318 ORTHO05D006791 7.8e-104 381.3 290 63.1
MBI19_g45589_MAGBIO Magnolia biondii HOM05D005318 ORTHO05D006791 7.8e-104 381.3 290 63.1
Oeu064748.1 Olea europaea HOM05D005318 ORTHO05D006791 1.0e-103 380.9 293 64.8
Hund24536 Selenicereus undatus HOM05D005318 ORTHO05D006791 1.3e-103 380.6 290 63.8
Dinv26400 Davidia involucrata HOM05D005318 ORTHO05D006791 8.6e-103 377.9 293 64.2
FvH4_1g29260 Fragaria vesca HOM05D005318 ORTHO05D006791 8.6e-103 377.9 290 63.8
Lalb_Chr14g0365451 Lupinus albus HOM05D005318 ORTHO05D006791 8.6e-103 377.9 293 64.8
Sed0003650 Sechium edule HOM05D005318 ORTHO05D006791 1.1e-102 377.5 225 76.9
THA.LOC104803226 Tarenaya hassleriana HOM05D005318 ORTHO05D006791 1.1e-102 377.5 295 63.1
Cfa019951 Carpinus fangiana HOM05D005318 ORTHO05D006791 1.5e-102 377.1 290 63.8
CsaV3_4G029230 Cucumis sativus L. HOM05D005318 ORTHO05D006791 2.5e-102 376.3 225 76.9
Eucgr.K01679 Eucalyptus grandis HOM05D005318 ORTHO05D006791 5.6e-102 375.2 290 63.8
FAN23G1756 Fragaria x ananassa HOM05D005318 ORTHO05D006791 9.5e-102 374.4 290 63.1
unitig_736.g22282 Utricularia gibba HOM05D005318 ORTHO05D006791 9.5e-102 374.4 225 76.9
FAN19G2285 Fragaria x ananassa HOM05D005318 ORTHO05D006791 2.8e-101 372.9 290 63.4
Ciclev10010989m.g Citrus clementina HOM05D005318 ORTHO05D006791 3.6e-101 372.5 290 62.1
AL4G38790 Arabidopsis lyrata HOM05D005318 ORTHO05D006791 4.7e-101 372.1 292 62.3
Sp4g23170 Schrenkiella parvula HOM05D005318 ORTHO05D006791 4.7e-101 372.1 292 62.3
ATR0782G050 Amborella trichopoda HOM05D005318 ORTHO05D006791 1.1e-100 370.9 290 61.7
AT2G40840 Arabidopsis thaliana HOM05D005318 ORTHO05D006791 3.1e-100 369.4 290 62.1
FAN26G2899 Fragaria x ananassa HOM05D005318 ORTHO05D006791 4.0e-100 369.0 290 62.4
PGR142G3097 Punica granatum HOM05D005318 ORTHO05D006791 2.6e-99 366.3 290 63.1
GSVIVG01025810001 Vitis vinifera HOM05D005318 ORTHO05D006791 4.4e-99 365.5 290 62.1
TWI74G0513 Tripterygium wilfordii HOM05D005318 ORTHO05D006791 9.9e-99 364.4 293 62.8
AUR62018414 Chenopodium quinoa HOM05D005318 ORTHO05D006791 2.9e-98 362.8 290 61.0
CiPaw.09G051900 Carya illinoinensis HOM05D005318 ORTHO05D006791 3.7e-98 362.5 290 61.4
HPP92_014255 Vanilla planifolia HOM05D005318 ORTHO05D006791 4.9e-98 362.1 293 61.8
RcHm_v2.0_Chr3g0494731 Rosa chinensis HOM05D005318 ORTHO05D006791 8.3e-98 361.3 292 61.0
Ah.04g150540 Amaranthus hybridus HOM05D005318 ORTHO05D006791 1.1e-97 360.9 225 74.7
AUR62021029 Chenopodium quinoa HOM05D005318 ORTHO05D006791 1.1e-97 360.9 293 61.4
Oeu064749.1 Olea europaea HOM05D005318 ORTHO05D006791 1.4e-97 360.5 253 69.2
EL10Ac3g07301 Beta vulgaris HOM05D005318 ORTHO05D006791 2.1e-96 356.7 290 61.7
CANSAT64G0498 Cannabis sativa HOM05D005318 ORTHO05D006791 6.0e-96 355.1 290 61.0
FAN06G1462 Fragaria x ananassa HOM05D005318 ORTHO05D006791 1.0e-95 354.4 232 72.4
CDE08G1108 Ceratophyllum demersum HOM05D005318 ORTHO05D006791 1.1e-94 350.9 290 56.9
ClCG04G005890 Citrullus lanatus HOM05D005318 ORTHO05D006791 4.4e-91 339.0 186 81.2
SGA_v2.0_scaffold240G44129 Striga asiatica HOM05D005318 ORTHO05D006791 4.9e-90 335.5 213 77.9
PSO384G1877 Papaver somniferum HOM05D005318 ORTHO05D006791 3.0e-87 326.2 290 57.2
BcaC02g12738 Brassica carinata HOM05D005318 ORTHO05D006791 3.9e-87 325.9 230 68.3
PSO339G3620 Papaver somniferum HOM05D005318 ORTHO05D006791 6.6e-87 325.1 290 56.9
SMO203G0025 Selaginella moellendorffii HOM05D005318 ORTHO05D006791 1.5e-83 313.9 292 53.4
SMO327G0045 Selaginella moellendorffii HOM05D005318 ORTHO05D006791 1.3e-82 310.8 292 53.1
Mapoly0011s0190 Marchantia polymorpha HOM05D005318 ORTHO05D006791 4.9e-82 308.9 296 52.0
AagrBONN_evm.TU.Sc2ySwM_344.1228 Anthoceros agrestis HOM05D005318 ORTHO05D006791 2.7e-80 303.1 295 52.5
Pp3c15_25660 Physcomitrium patens HOM05D005318 ORTHO05D006791 4.6e-80 302.4 296 52.4
Haze_20288 Corylus avellana HOM05D005318 ORTHO05D006791 4.2e-73 279.3 224 63.4
FAN28G1591 Fragaria x ananassa HOM05D005318 ORTHO05D006791 1.8e-71 273.9 154 79.9
TPR.G23186 Trifolium pratense HOM05D005318 ORTHO05D006791 3.0e-71 273.1 231 60.2
MELO3C019135.2 Cucumis melo HOM05D005318 ORTHO05D006791 8.1e-69 265.0 159 78.0
CBR_g6687 Chara braunii HOM05D005318 ORTHO05D006791 3.2e-65 253.1 226 52.2
PRCOL_00001049 Prasinoderma coloniale HOM05D005318 ORTHO05D006791 2.3e-55 220.3 195 50.8
Zm00001eb197360 Zea mays HOM05D005318 ORTHO05D006791 8.7e-55 218.4 119 80.7
Cre02.g095126 Chlamydomonas reinhardtii HOM05D005318 ORTHO05D006791 2.8e-53 213.4 233 45.9
MCO02G281 Micromonas commoda HOM05D005318 ORTHO05D006791 1.7e-50 204.1 202 48.5
Oeu060769.1 Olea europaea HOM05D005318 ORTHO05D006791 5.5e-33 146.0 102 68.6
TPR.G36183 Trifolium pratense HOM05D005318 ORTHO05D006791 8.2e-29 132.1 73 74.0
Zm00001eb329980 Zea mays HOM05D005318 ORTHO05D006791 4.8e-21 106.3 141 42.6
C07p47440 Brassica napus HOM05D005318 ORTHO05D032321 1.7e-10 71.2 58 63.8
BolC7t45271H Brassica oleracea HOM05D005318 ORTHO05D032321 1.7e-10 71.2 58 63.8
PGSC0003DMG400043378 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.5e-09 67.4 114 41.2
PGSC0003DMG400038517 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.2e-09 65.9 123 40.7
PGSC0003DMG400008733 Solanum tuberosum HOM05D008877 ORTHO05D006370 1.0e-07 62.0 55 52.7
PGSC0003DMG400013120 Solanum tuberosum HOM05D008877 ORTHO05D006370 2.3e-07 60.8 50 60.0
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 1.5e-06 58.2 50 52.0
PGSC0003DMG400014630 Solanum tuberosum HOM05D008877 ORTHO05D006370 3.4e-06 57.0 50 50.0
PGSC0003DMG400020925 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.5e-06 55.8 50 50.0
PGSC0003DMG400027282 Solanum tuberosum HOM05D008877 ORTHO05D006370 7.5e-06 55.8 50 54.0


User provided reference genes

Program Settings