Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G388.75 Capsicum annuum HOM05D008574 ORTHO05D010611 1.7e-157 559.3 279 100.0
CAN.G79.92 Capsicum annuum HOM05D008574 ORTHO05D010611 9.4e-60 234.6 220 59.5
CAN.G410.12 Capsicum annuum HOM05D008574 ORTHO05D010611 8.0e-51 204.9 202 55.9
CAN.G100.6 Capsicum annuum HOM05D008574 ORTHO05D010611 5.2e-50 202.2 195 59.0
CAN.G348.6 Capsicum annuum HOM05D005504 ORTHO05D010611 1.0e-42 177.9 210 51.0
CAN.G997.9 Capsicum annuum HOM05D008574 ORTHO05D010611 1.8e-42 177.2 138 69.6
CAN.G234.11 Capsicum annuum HOM05D000198 ORTHO05D003365 2.8e-40 169.9 153 60.1
CAN.G151.31 Capsicum annuum HOM05D008574 ORTHO05D010611 1.2e-33 147.9 165 52.1
Peaxi162Scf00002g00292 Petunia axillaris HOM05D008574 ORTHO05D010611 3.4e-33 146.4 164 51.8
Peaxi162Scf00008g00018 Petunia axillaris HOM05D008574 ORTHO05D010611 2.1e-27 127.1 164 47.0
CAN.G15.3 Capsicum annuum HOM05D008574 ORTHO05D010611 1.2e-22 111.3 89 62.9
CAN.G8.6 Capsicum annuum HOM05D003926 ORTHO05D010611 8.6e-21 105.1 104 55.8
TPR.G27983 Trifolium pratense HOM05D005504 ORTHO05D002688 7.3e-20 102.1 181 34.3
Solyc04g050030.1 Solanum lycopersicum HOM05D008574 ORTHO05D010611 1.3e-16 91.3 111 50.5
Solyc12g020030.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 8.3e-16 88.6 57 68.4
Nitab4.5_0000584g0010 Nicotiana tabacum HOM05D008574 ORTHO05D010611 3.5e-14 83.2 106 44.3
Medtr8g062180 Medicago truncatula HOM05D014266 ORTHO05D018035 5.1e-13 79.3 270 25.9
Atru.chr5.1595 Acer truncatum HOM05D000034 ORTHO05D000037 5.6e-12 75.9 57 63.2
AUR62040606 Chenopodium quinoa HOM05D000034 ORTHO05D000037 7.3e-12 75.5 326 26.7
arahy.Tifrunner.gnm1.ann1.AF0AHW Arachis hypogaea HOM05D000034 ORTHO05D000037 1.2e-11 74.7 342 24.6
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 2.8e-11 73.6 338 25.4
TPR.G21815 Trifolium pratense HOM05D003568 ORTHO05D004104 3.6e-11 73.2 181 29.8
Peaxi162Scf00481g00717 Petunia axillaris HOM05D008574 ORTHO05D010611 4.7e-11 72.8 114 44.7
Rhsim08G0135500 Rhododendron simsii HOM05D000034 ORTHO05D000037 6.2e-11 72.4 57 57.9
TPR.G468 Trifolium pratense HOM05D000034 ORTHO05D000037 1.4e-10 71.2 117 33.3
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.8e-10 68.9 223 26.5
CSS0045906 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.0e-09 67.4 265 23.8
TPR.G19283 Trifolium pratense HOM05D001558 ORTHO05D000037 3.4e-09 66.6 57 54.4
Psat7g219160 Pisum sativum HOM05D014266 ORTHO05D018035 5.8e-09 65.9 239 28.9
TPR.G3961 Trifolium pratense HOM05D000034 ORTHO05D000037 5.8e-09 65.9 57 54.4
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 9.9e-09 65.1 285 23.9
Rhsim01G0122200 Rhododendron simsii HOM05D000367 ORTHO05D002688 9.9e-09 65.1 231 25.5
TPR.G40860 Trifolium pratense HOM05D000034 ORTHO05D000037 3.8e-08 63.2 110 34.5
Cpa.g.sc68.23 Carica papaya HOM05D026412 ORTHO05D010611 6.4e-08 62.4 116 35.3
Atru.chr1.2747 Acer truncatum HOM05D000034 ORTHO05D000037 8.4e-08 62.0 57 52.6
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 8.4e-08 62.0 285 23.2
Nitab4.5_0001739g0080 Nicotiana tabacum HOM05D008574 ORTHO05D010611 1.1e-07 61.6 71 47.9
arahy.Tifrunner.gnm1.ann1.0CN3DG Arachis hypogaea HOM05D000034 ORTHO05D000037 1.4e-07 61.2 57 50.9
arahy.Tifrunner.gnm1.ann1.2LJR5V Arachis hypogaea HOM05D000034 ORTHO05D000037 1.4e-07 61.2 57 50.9
arahy.Tifrunner.gnm1.ann1.4TMC55 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.4e-07 61.2 57 50.9
arahy.Tifrunner.gnm1.ann1.J7EXNL Arachis hypogaea HOM05D000034 ORTHO05D000037 1.4e-07 61.2 57 50.9
Medtr8g463880 Medicago truncatula HOM05D000034 ORTHO05D000037 1.4e-07 61.2 57 50.9
AUR62008528 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.9e-07 60.8 93 40.9
TPR.G34592 Trifolium pratense HOM05D000034 ORTHO05D000037 3.2e-07 60.1 93 38.7
Hma1.2p1_0798F.1_g219540 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.1e-07 59.7 53 52.8
Hma1.2p1_1074F.1_g254280 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.1e-07 59.7 53 52.8
TPR.G21816 Trifolium pratense HOM05D000034 ORTHO05D000037 4.1e-07 59.7 57 49.1
Atru.chr5.1249 Acer truncatum HOM05D000034 ORTHO05D000037 5.4e-07 59.3 65 46.2
EL10Ac8g20166 Beta vulgaris HOM05D000034 ORTHO05D000037 5.4e-07 59.3 115 35.7
ECA233G4621 Erigeron canadensis HOM05D000911 ORTHO05D000890 5.4e-07 59.3 136 33.1
arahy.Tifrunner.gnm1.ann1.S3G2CD Arachis hypogaea HOM05D000034 ORTHO05D000037 7.1e-07 58.9 57 47.4
CSS0041263 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 7.1e-07 58.9 159 30.2
Psat0s1646g0360 Pisum sativum HOM05D000034 ORTHO05D000037 7.1e-07 58.9 57 49.1
Hma1.2p1_0672F.1_g201050 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.2e-07 58.5 57 52.6
Medtr1789s0010 Medicago truncatula HOM05D014266 ORTHO05D002688 9.2e-07 58.5 48 47.9
Atru.chr9.117 Acer truncatum HOM05D000034 ORTHO05D000037 1.2e-06 58.2 106 34.0
arahy.Tifrunner.gnm1.ann1.KHJB0S Arachis hypogaea HOM05D000034 ORTHO05D000037 1.2e-06 58.2 57 47.4
arahy.Tifrunner.gnm1.ann1.GIX9KU Arachis hypogaea HOM05D000034 ORTHO05D000037 1.6e-06 57.8 64 43.8
AUR62044082 Chenopodium quinoa HOM05D000034 ORTHO05D030741 1.6e-06 57.8 57 54.4
MELO3C030820.2 Cucumis melo HOM05D001651 ORTHO05D000277 1.6e-06 57.8 197 28.4
arahy.Tifrunner.gnm1.ann1.1E5NJ8 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.1e-06 57.4 91 39.6
arahy.Tifrunner.gnm1.ann1.I9R3F7 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.1e-06 57.4 91 39.6
arahy.Tifrunner.gnm1.ann1.QJ6RH7 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.1e-06 57.4 57 49.1
Medtr5g063300 Medicago truncatula HOM05D000034 ORTHO05D000037 2.1e-06 57.4 53 52.8
arahy.Tifrunner.gnm1.ann1.4S4BCN Arachis hypogaea HOM05D000034 ORTHO05D000037 2.7e-06 57.0 57 47.4
FvH4_1g22560 Fragaria vesca HOM05D000034 ORTHO05D000037 2.7e-06 57.0 215 29.8
Hma1.2p1_0091F.1_g046180 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.7e-06 57.0 57 50.9
Hma1.2p1_1121F.1_g259230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.7e-06 57.0 156 29.5
Hma1.2p1_3244F.1_g334330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.7e-06 57.0 57 52.6
arahy.Tifrunner.gnm1.ann1.R87UEX Arachis hypogaea HOM05D000034 ORTHO05D000037 3.5e-06 56.6 57 47.4
arahy.Tifrunner.gnm1.ann1.ZAI0PN Arachis hypogaea HOM05D000034 ORTHO05D000037 3.5e-06 56.6 55 47.3
EL10Ac2g03305 Beta vulgaris HOM05D000034 ORTHO05D000037 3.5e-06 56.6 57 47.4
Hma1.2p1_0308F.1_g120260 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.5e-06 56.6 57 52.6
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 3.5e-06 56.6 109 38.5
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 3.5e-06 56.6 109 38.5
Atru.chr1.1500 Acer truncatum HOM05D000034 ORTHO05D000037 4.6e-06 56.2 65 43.1
arahy.Tifrunner.gnm1.ann1.RY2FI6 Arachis hypogaea HOM05D000034 ORTHO05D000037 4.6e-06 56.2 57 45.6
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 4.6e-06 56.2 206 24.3
TPR.G30347 Trifolium pratense HOM05D000034 ORTHO05D000037 4.6e-06 56.2 188 30.3
Atru.chr2.1361 Acer truncatum HOM05D000034 ORTHO05D000037 6.0e-06 55.8 65 44.6
Atru.chr2.1368 Acer truncatum HOM05D000034 ORTHO05D000003 6.0e-06 55.8 65 44.6
Atru.chr6.616 Acer truncatum HOM05D000034 ORTHO05D000037 6.0e-06 55.8 65 44.6
arahy.Tifrunner.gnm1.ann1.RN7F5A Arachis hypogaea HOM05D000034 ORTHO05D002688 6.0e-06 55.8 57 45.6
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 6.0e-06 55.8 168 28.6
Atru.chr12.1422 Acer truncatum HOM05D000034 ORTHO05D000037 7.8e-06 55.5 57 43.9
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 7.8e-06 55.5 119 35.3


User provided reference genes

Program Settings