Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G388.73 Capsicum annuum HOM05D002534 ORTHO05D115388 7.4e-99 364.0 189 100.0
CAN.G226.13 Capsicum annuum HOM05D002534 ORTHO05D114883 3.1e-12 76.3 95 49.5
CAN.G198.14 Capsicum annuum HOM05D002534 ORTHO05D115609 4.9e-10 68.9 86 50.0
CAN.G1156.47 Capsicum annuum HOM05D002534 ORTHO05D003026 4.2e-09 65.9 79 50.6
CAN.G1156.48 Capsicum annuum HOM05D002534 ORTHO05D003026 4.2e-09 65.9 79 50.6
CAN.G305.48 Capsicum annuum HOM05D000197 ORTHO05D000114 4.2e-09 65.9 80 47.5
Peaxi162Scf00525g00110 Petunia axillaris HOM05D002534 ORTHO05D003026 1.2e-08 64.3 79 50.6
PGSC0003DMG402023446 Solanum tuberosum HOM05D002534 ORTHO05D003026 1.6e-08 63.9 79 48.1
Sopen05g034880 Solanum pennellii HOM05D002534 ORTHO05D003026 3.5e-08 62.8 79 48.1
CAN.G1245.14 Capsicum annuum HOM05D003487 ORTHO05D000140 6.0e-08 62.0 44 70.5
CAN.G186.78 Capsicum annuum HOM05D002534 ORTHO05D115456 6.0e-08 62.0 38 84.2
CAN.G78.45 Capsicum annuum HOM05D002534 ORTHO05D003026 7.9e-08 61.6 50 64.0
Solyc05g056480.3 Solanum lycopersicum HOM05D002534 ORTHO05D003026 7.9e-08 61.6 79 48.1
COL.COLO4_35763 Corchorus olitorius HOM05D002534 ORTHO05D003026 3.0e-07 59.7 48 58.3
Lj2A607T36 Lonicera japonica HOM05D002534 ORTHO05D003026 5.1e-07 58.9 71 45.1
ClCG01G015350 Citrullus lanatus HOM05D002534 ORTHO05D003026 8.7e-07 58.2 65 43.1
Rhsim08G0002200 Rhododendron simsii HOM05D002534 ORTHO05D003026 8.7e-07 58.2 48 56.2
TAR628G0895 Trochodendron aralioides HOM05D002534 ORTHO05D003026 8.7e-07 58.2 88 35.2
Nn1g06287 Nelumbo nucifera HOM05D002534 ORTHO05D003026 1.1e-06 57.8 101 35.6
vmacro18672 Vaccinium macrocarpon HOM05D002534 ORTHO05D003026 1.1e-06 57.8 48 56.2
Ciclev10001030m.g Citrus clementina HOM05D002534 ORTHO05D003026 1.5e-06 57.4 53 58.5
SMO119G0269 Selaginella moellendorffii HOM05D002534 ORTHO05D003026 1.5e-06 57.4 106 37.7
SEGI_07053 Sequoiadendron giganteum HOM05D002534 ORTHO05D003026 1.5e-06 57.4 70 45.7
A03p04090 Brassica napus HOM05D002534 ORTHO05D003026 1.9e-06 57.0 40 60.0
C03p04550 Brassica napus HOM05D002534 ORTHO05D003026 1.9e-06 57.0 40 60.0
BolC3t12986H Brassica oleracea HOM05D002534 ORTHO05D003026 1.9e-06 57.0 40 60.0
Cpa.g.sc26.70 Carica papaya HOM05D002534 ORTHO05D003026 1.9e-06 57.0 95 36.8
Duzib264G1132 Durio zibethinus HOM05D002534 ORTHO05D003026 1.9e-06 57.0 79 40.5
Gohir.A05G383600 Gossypium hirsutum HOM05D002534 ORTHO05D003026 1.9e-06 57.0 79 40.5
GSVIVG01026470001 Vitis vinifera HOM05D002534 ORTHO05D003026 1.9e-06 57.0 71 42.3
Aqoxy6G00344 Aquilegia oxysepala HOM05D002534 ORTHO05D003026 2.5e-06 56.6 70 41.4
CAN.G630.70 Capsicum annuum HOM05D001793 ORTHO05D001938 3.3e-06 56.2 36 83.3
Haze_25259 Corylus avellana HOM05D002534 ORTHO05D003026 3.3e-06 56.2 40 55.0
DCAR_014112 Daucus carota HOM05D002534 ORTHO05D003026 3.3e-06 56.2 69 44.9
Hma1.2p1_0107F.1_g051210 Hydrangea macrophylla HOM05D002534 ORTHO05D003026 3.3e-06 56.2 40 65.0
Thecc.01G134100 Theobroma cacao HOM05D002534 ORTHO05D003026 3.3e-06 56.2 79 40.5
AL1G34510 Arabidopsis lyrata HOM05D002534 ORTHO05D003026 4.3e-06 55.8 53 56.6
CSS0022049 Camellia sinensis var. sinensis HOM05D002534 ORTHO05D003026 4.3e-06 55.8 70 42.9
Dinv25775 Davidia involucrata HOM05D002534 ORTHO05D003026 4.3e-06 55.8 39 64.1
Gohir.D04G031700 Gossypium hirsutum HOM05D002534 ORTHO05D003026 4.3e-06 55.8 79 40.5
Gorai.012G036000 Gossypium raimondii HOM05D002534 ORTHO05D003026 4.3e-06 55.8 79 40.5
Nitab4.5_0004515g0020 Nicotiana tabacum HOM05D002534 ORTHO05D003026 4.3e-06 55.8 82 39.0
CAN.G46.33 Capsicum annuum HOM05D002534 ORTHO05D003026 5.6e-06 55.5 66 45.5
Cfa002906 Carpinus fangiana HOM05D002534 ORTHO05D003026 5.6e-06 55.5 40 55.0
Duzib093G1801 Durio zibethinus HOM05D002534 ORTHO05D003026 5.6e-06 55.5 53 50.9
Gohir.A05G240500 Gossypium hirsutum HOM05D002534 ORTHO05D003026 5.6e-06 55.5 53 52.8
Gohir.D05G241600 Gossypium hirsutum HOM05D002534 ORTHO05D003026 5.6e-06 55.5 53 52.8
Gorai.009G251000 Gossypium raimondii HOM05D002534 ORTHO05D003026 5.6e-06 55.5 53 52.8
Mapoly0006s0123 Marchantia polymorpha HOM05D002534 ORTHO05D003026 5.6e-06 55.5 74 40.5
vmacro00877 Vaccinium macrocarpon HOM05D002534 ORTHO05D003026 5.6e-06 55.5 72 41.7
Carub.0006s0785 Capsella rubella HOM05D002534 ORTHO05D003026 7.4e-06 55.1 40 57.5
Thecc.08G137900 Theobroma cacao HOM05D002534 ORTHO05D003026 7.4e-06 55.1 53 54.7
BcaC07g39097 Brassica carinata HOM05D002534 ORTHO05D003026 9.6e-06 54.7 53 54.7
C08p20810 Brassica napus HOM05D002534 ORTHO05D003026 9.6e-06 54.7 53 54.7
BolC8t49719H Brassica oleracea HOM05D002534 ORTHO05D003026 9.6e-06 54.7 53 54.7
Dinv24379 Davidia involucrata HOM05D002534 ORTHO05D003026 9.6e-06 54.7 40 62.5
Eucgr.F02765 Eucalyptus grandis HOM05D002534 ORTHO05D003026 9.6e-06 54.7 70 41.4
Nn5g28511 Nelumbo nucifera HOM05D002534 ORTHO05D003026 9.6e-06 54.7 101 30.7
QL10p043417 Quercus lobata HOM05D002534 ORTHO05D003026 9.6e-06 54.7 39 59.0
Solyc06g059850.2 Solanum lycopersicum HOM05D002534 ORTHO05D003026 9.6e-06 54.7 117 31.6
Sopen06g019930 Solanum pennellii HOM05D002534 ORTHO05D003026 9.6e-06 54.7 117 31.6
PGSC0003DMG400024860 Solanum tuberosum HOM05D002534 ORTHO05D003026 9.6e-06 54.7 66 43.9


User provided reference genes

Program Settings