Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G388.12 Capsicum annuum HOM05D006036 ORTHO05D007736 4.0e-90 334.7 167 100.0
Peaxi162Scf00021g01720 Petunia axillaris HOM05D006036 ORTHO05D007736 2.1e-51 206.1 111 89.2
PGSC0003DMG400012774 Solanum tuberosum HOM05D006036 ORTHO05D007736 6.2e-51 204.5 110 90.0
Sopen01g037100 Solanum pennellii HOM05D006036 ORTHO05D007736 8.2e-51 204.1 110 89.1
Solyc01g091360.4 Solanum lycopersicum HOM05D006036 ORTHO05D007736 3.1e-50 202.2 110 88.2
Nitab4.5_0005372g0020 Nicotiana tabacum HOM05D006036 ORTHO05D007736 5.3e-50 201.4 110 88.2
Rhsim01G0147400 Rhododendron simsii HOM05D006036 ORTHO05D007736 1.0e-45 187.2 108 82.4
Actinidia12688 Actinidia chinensis HOM05D006036 ORTHO05D007736 3.9e-45 185.3 108 80.6
vmacro21008 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 6.7e-45 184.5 108 80.6
CSS0011162 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 2.8e-43 179.1 108 76.9
CSS0022013 Camellia sinensis var. sinensis HOM05D006036 ORTHO05D007736 2.8e-43 179.1 108 76.9
Nn1g01232 Nelumbo nucifera HOM05D006036 ORTHO05D007736 6.3e-43 177.9 106 76.4
Oeu037915.1 Olea europaea HOM05D006036 ORTHO05D007736 6.3e-43 177.9 111 76.6
Hund17020 Selenicereus undatus HOM05D006036 ORTHO05D007736 8.2e-43 177.6 111 74.8
Psat7g231640 Pisum sativum HOM05D006036 ORTHO05D007736 3.1e-42 175.6 110 70.9
Ah.16g109830 Amaranthus hybridus HOM05D006036 ORTHO05D007736 5.3e-42 174.9 113 73.5
QL08p052466 Quercus lobata HOM05D006036 ORTHO05D007736 5.3e-42 174.9 108 76.9
GSVIVG01027612001 Vitis vinifera HOM05D006036 ORTHO05D007736 6.9e-42 174.5 112 74.1
Aqoxy7G00627 Aquilegia oxysepala HOM05D006036 ORTHO05D007736 2.0e-41 172.9 111 74.8
SalBow5G0783 Salvia bowleyana HOM05D006036 ORTHO05D007736 2.0e-41 172.9 111 72.1
Glyma.01G142900 Glycine max HOM05D006036 ORTHO05D007736 3.4e-41 172.2 110 70.9
SalBow5G3583 Salvia bowleyana HOM05D006036 ORTHO05D007736 5.9e-41 171.4 111 72.1
Glyma.03G023900 Glycine max HOM05D006036 ORTHO05D007736 7.6e-41 171.0 110 70.0
Ca_03013_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 1.0e-40 170.6 110 66.4
Cc02_g36690 Coffea canephora HOM05D006036 ORTHO05D007736 1.0e-40 170.6 109 74.3
Glyma.14G070200 Glycine max HOM05D006036 ORTHO05D007736 1.0e-40 170.6 110 70.0
Medtr4g023550 Medicago truncatula HOM05D006036 ORTHO05D007736 1.0e-40 170.6 108 71.3
Haze_16816 Corylus avellana HOM05D006036 ORTHO05D007736 1.7e-40 169.9 108 75.0
MBI04_g35276_MAGBIO Magnolia biondii HOM05D006036 ORTHO05D007736 2.2e-40 169.5 118 69.5
Sed0014119 Sechium edule HOM05D006036 ORTHO05D007736 2.9e-40 169.1 111 72.1
Sed0006891 Sechium edule HOM05D006036 ORTHO05D007736 5.0e-40 168.3 111 72.1
AUR62013628 Chenopodium quinoa HOM05D006036 ORTHO05D007736 8.5e-40 167.5 111 72.1
ClCG06G000370 Citrullus lanatus HOM05D006036 ORTHO05D007736 1.1e-39 167.2 108 73.1
TPR.G9852 Trifolium pratense HOM05D006036 ORTHO05D007736 1.1e-39 167.2 108 70.4
CiPaw.01G261900 Carya illinoinensis HOM05D006036 ORTHO05D007736 1.4e-39 166.8 108 73.1
Eucgr.E01417 Eucalyptus grandis HOM05D006036 ORTHO05D007736 1.4e-39 166.8 111 70.3
TWI14G1308 Tripterygium wilfordii HOM05D006036 ORTHO05D007736 1.4e-39 166.8 109 72.5
unitig_8.g4983 Utricularia gibba HOM05D006036 ORTHO05D007736 1.9e-39 166.4 109 72.5
MSTRG.4890 Avicennia marina HOM05D006036 ORTHO05D007736 2.5e-39 166.0 113 72.6
EL10Ac1g00899 Beta vulgaris HOM05D006036 ORTHO05D007736 3.2e-39 165.6 111 71.2
Cfa001720 Carpinus fangiana HOM05D006036 ORTHO05D007736 3.2e-39 165.6 107 73.8
AUR62004220 Chenopodium quinoa HOM05D006036 ORTHO05D007736 3.2e-39 165.6 111 72.1
MELO3C035247.2 Cucumis melo HOM05D006036 ORTHO05D007736 3.2e-39 165.6 108 73.1
Lalb_Chr07g0189801 Lupinus albus HOM05D006036 ORTHO05D007736 4.2e-39 165.2 109 67.0
Sc02g0002580 Simmondsia chinensis HOM05D006036 ORTHO05D007736 4.2e-39 165.2 111 70.3
Gohir.A08G134500 Gossypium hirsutum HOM05D006036 ORTHO05D007736 5.5e-39 164.9 109 72.5
Lj3g0008791 Lotus japonicus HOM05D006036 ORTHO05D007736 7.2e-39 164.5 110 67.3
Ciclev10022362m.g Citrus clementina HOM05D006036 ORTHO05D007736 9.3e-39 164.1 108 72.2
CsaV3_6G006160 Cucumis sativus L. HOM05D006036 ORTHO05D007736 9.3e-39 164.1 107 72.0
Duzib133G1287 Durio zibethinus HOM05D006036 ORTHO05D007736 1.6e-38 163.3 109 72.5
Thecc.01G376100 Theobroma cacao HOM05D006036 ORTHO05D007736 1.6e-38 163.3 109 72.5
CDE02G2016 Ceratophyllum demersum HOM05D006036 ORTHO05D007736 4.6e-38 161.8 109 72.5
Cpa.g.sc349.4 Carica papaya HOM05D006036 ORTHO05D007736 6.1e-38 161.4 109 69.7
HanXRQChr16g0520241 Helianthus annuus HOM05D006036 ORTHO05D007736 6.1e-38 161.4 110 70.0
PGR042G0035 Punica granatum HOM05D006036 ORTHO05D007736 7.9e-38 161.0 109 72.5
Prupe.2G145700 Prunus persica HOM05D006036 ORTHO05D007736 1.8e-37 159.8 108 70.4
FAN03G0372 Fragaria x ananassa HOM05D006036 ORTHO05D007736 3.0e-37 159.1 109 69.7
Glyma.08G286100 Glycine max HOM05D006036 ORTHO05D007736 3.0e-37 159.1 110 65.5
Phvul.010G084400 Phaseolus vulgaris HOM05D006036 ORTHO05D007736 3.0e-37 159.1 121 62.0
FAN10G0738 Fragaria x ananassa HOM05D006036 ORTHO05D007736 3.9e-37 158.7 109 68.8
FAN10G3538 Fragaria x ananassa HOM05D006036 ORTHO05D007736 3.9e-37 158.7 109 68.8
vmacro21009 Vaccinium macrocarpon HOM05D006036 ORTHO05D007736 6.7e-37 157.9 92 80.4
arahy.Tifrunner.gnm1.ann1.B3VI1A Arachis hypogaea HOM05D006036 ORTHO05D007736 8.8e-37 157.5 110 66.4
arahy.Tifrunner.gnm1.ann1.Y8TVDJ Arachis hypogaea HOM05D006036 ORTHO05D007736 8.8e-37 157.5 110 66.4
RcHm_v2.0_Chr1g0350591 Rosa chinensis HOM05D006036 ORTHO05D007736 8.8e-37 157.5 109 68.8
ECA234G4399 Erigeron canadensis HOM05D006036 ORTHO05D007736 1.1e-36 157.1 110 69.1
SEGI_01363 Sequoiadendron giganteum HOM05D006036 ORTHO05D007736 1.1e-36 157.1 108 69.4
Manes.05G045200 Manihot esculenta HOM05D006036 ORTHO05D007736 1.5e-36 156.8 108 69.4
Potri.002G148400 Populus trichocarpa HOM05D006036 ORTHO05D007736 1.5e-36 156.8 108 69.4
FAN01G0425 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.5e-36 156.0 109 67.9
Lsat_1_v5_gn_4_40940 Lactuca sativa HOM05D006036 ORTHO05D007736 4.3e-36 155.2 110 68.2
VMungo0331G0186 Vigna mungo HOM05D006036 ORTHO05D007736 4.3e-36 155.2 100 71.0
A09p53070 Brassica napus HOM05D006036 ORTHO05D007736 7.4e-36 154.5 108 70.4
BraA09t40733Z Brassica rapa HOM05D006036 ORTHO05D007736 7.4e-36 154.5 108 70.4
BolC8t51167H Brassica oleracea HOM05D006036 ORTHO05D007736 9.7e-36 154.1 108 70.4
CANSAT56G2189 Cannabis sativa HOM05D006036 ORTHO05D007736 1.3e-35 153.7 108 66.7
CARHR171200 Cardamine hirsuta HOM05D006036 ORTHO05D007736 1.3e-35 153.7 108 69.4
Medtr7g074920 Medicago truncatula HOM05D006036 ORTHO05D007736 1.3e-35 153.7 110 60.0
Os03g0858700 Oryza sativa ssp. japonica HOM05D006036 ORTHO05D007736 1.3e-35 153.7 124 62.1
Sabra02G0117300 Salix brachista HOM05D006036 ORTHO05D007736 1.3e-35 153.7 108 67.6
MD02G1204100 Malus domestica HOM05D006036 ORTHO05D007736 1.7e-35 153.3 108 70.4
Sabra02G0115600 Salix brachista HOM05D006036 ORTHO05D007736 1.7e-35 153.3 108 67.6
Carub.0005s2756 Capsella rubella HOM05D006036 ORTHO05D007736 2.2e-35 152.9 108 69.4
BcaC07g40602 Brassica carinata HOM05D006036 ORTHO05D007736 2.8e-35 152.5 108 69.4
C08p35770 Brassica napus HOM05D006036 ORTHO05D007736 2.8e-35 152.5 108 69.4
FvH4_7g11910 Fragaria vesca HOM05D006036 ORTHO05D007736 4.8e-35 151.8 109 67.9
Zm00001eb210410 Zea mays HOM05D006036 ORTHO05D007736 4.8e-35 151.8 108 67.6
BcaC07g42642 Brassica carinata HOM05D006036 ORTHO05D007736 8.2e-35 151.0 108 68.5
VMungo0251G0926 Vigna mungo HOM05D006036 ORTHO05D007736 8.2e-35 151.0 100 69.0
Dinv32378 Davidia involucrata HOM05D006036 ORTHO05D007736 1.4e-34 150.2 95 76.8
Sp5g02440 Schrenkiella parvula HOM05D006036 ORTHO05D007736 2.4e-34 149.4 108 67.6
AL5G43130 Arabidopsis lyrata HOM05D006036 ORTHO05D007736 3.1e-34 149.1 108 67.6
AT3G60810 Arabidopsis thaliana HOM05D006036 ORTHO05D007736 3.1e-34 149.1 108 67.6
DCAR_031531 Daucus carota HOM05D006036 ORTHO05D007736 5.3e-34 148.3 96 72.9
Thhalv10006234m.g Eutrema salsugineum HOM05D006036 ORTHO05D007736 9.1e-34 147.5 108 69.4
FAN06G1700 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.6e-33 146.0 93 73.1
ATR0810G113 Amborella trichopoda HOM05D006036 ORTHO05D007736 4.5e-33 145.2 101 69.3
THA.LOC104802443 Tarenaya hassleriana HOM05D006036 ORTHO05D007736 5.9e-33 144.8 102 65.7
Aa31LG10G15050 Aethionema arabicum HOM05D006036 ORTHO05D007736 1.0e-32 144.1 106 67.9
Mapoly0007s0216 Marchantia polymorpha HOM05D006036 ORTHO05D007736 1.3e-32 143.7 107 61.7
SMO143G0045 Selaginella moellendorffii HOM05D006036 ORTHO05D007736 1.3e-32 143.7 107 63.6
Lj9A569G50 Lonicera japonica HOM05D006036 ORTHO05D007736 5.0e-32 141.7 95 71.6
Atru.chr5.310 Acer truncatum HOM05D006036 ORTHO05D007736 5.5e-31 138.3 92 73.9
AagrBONN_evm.TU.Sc2ySwM_117.1558 Anthoceros agrestis HOM05D006036 ORTHO05D007736 7.2e-31 137.9 107 60.7
Ca_07819_v3 Cicer arietinum L. HOM05D006036 ORTHO05D007736 2.1e-30 136.3 95 63.2
Pp3c23_9860 Physcomitrium patens HOM05D006036 ORTHO05D007736 4.7e-30 135.2 107 59.8
Cre11.g468750 Chlamydomonas reinhardtii HOM05D006036 ORTHO05D007736 1.8e-29 133.3 107 58.9
FAN06G2896 Fragaria x ananassa HOM05D006036 ORTHO05D007736 2.8e-27 125.9 76 75.0
CBR_g54966 Chara braunii HOM05D006036 ORTHO05D007736 3.7e-27 125.6 83 67.5
Gorai.007G091200 Gossypium raimondii HOM05D001611 ORTHO05D001464 1.7e-24 116.7 70 75.7
Gohir.D11G085366 Gossypium hirsutum HOM05D001611 ORTHO05D001464 3.2e-23 112.5 70 72.9
Hma1.2p1_1122F.1_g259290 Hydrangea macrophylla HOM05D006036 ORTHO05D007736 6.1e-22 108.2 110 52.7
Lalb_Chr03g0039551 Lupinus albus HOM05D006036 ORTHO05D007736 1.1e-20 104.0 79 59.5
Nitab4.5_0000457g0290 Nicotiana tabacum HOM05D006036 ORTHO05D007736 2.6e-20 102.8 92 58.7
PSO782G0421 Papaver somniferum HOM05D006036 ORTHO05D007736 9.7e-20 100.9 111 48.6
PSO478G2400 Papaver somniferum HOM05D006036 ORTHO05D007736 3.7e-19 99.0 111 48.6
Gohir.D08G155400 Gossypium hirsutum HOM05D006036 ORTHO05D007736 7.0e-18 94.7 67 70.1
Ciclev10033315m.g Citrus clementina HOM05D006036 ORTHO05D007736 1.3e-16 90.5 139 41.0
Lj1g0011795 Lotus japonicus HOM05D006036 ORTHO05D007736 2.9e-16 89.4 54 66.7
MCO13G087 Micromonas commoda HOM05D006036 ORTHO05D007736 2.9e-16 89.4 155 38.1
SGA_v2.0_scaffold153G37014 Striga asiatica HOM05D006036 ORTHO05D001464 1.6e-14 83.6 102 45.1
Gorai.004G161600 Gossypium raimondii HOM05D006036 ORTHO05D007736 1.4e-10 70.5 72 54.2
COL.COLO4_12549 Corchorus olitorius HOM05D006036 ORTHO05D007736 7.0e-10 68.2 56 64.3
Lalb_Chr03g0039561 Lupinus albus HOM05D006036 ORTHO05D007736 4.5e-09 65.5 56 53.6
Glyma.09G269100 Glycine max HOM05D006036 ORTHO05D007736 2.7e-06 56.2 51 52.9


User provided reference genes

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