Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G385.11 Capsicum annuum HOM05D000654 ORTHO05D002330 7.8e-134 480.7 247 100.0
CAN.G437.20 Capsicum annuum HOM05D000654 ORTHO05D002330 1.7e-24 117.5 94 72.3
CAN.G640.1 Capsicum annuum HOM05D000654 ORTHO05D002330 2.1e-22 110.5 112 64.3
CAN.G938.4 Capsicum annuum HOM05D000654 ORTHO05D002330 4.4e-20 102.8 102 65.7
CAN.G802.3 Capsicum annuum HOM05D000654 ORTHO05D002330 7.6e-20 102.1 89 70.8
CAN.G1666.1 Capsicum annuum HOM05D000654 ORTHO05D002330 8.3e-19 98.6 110 59.1
CAN.G27.45 Capsicum annuum HOM05D000654 ORTHO05D002330 1.2e-17 94.7 120 54.2
CAN.G537.9 Capsicum annuum HOM05D000654 ORTHO05D002330 2.7e-17 93.6 105 58.1
Solyc06g060320.4 Solanum lycopersicum HOM05D000654 ORTHO05D002330 3.5e-17 93.2 102 62.7
Sopen06g020440 Solanum pennellii HOM05D000654 ORTHO05D002330 6.0e-17 92.4 102 62.7
Nitab4.5_0004044g0010 Nicotiana tabacum HOM05D000654 ORTHO05D002330 3.0e-16 90.1 102 60.8
Nitab4.5_0000322g0170 Nicotiana tabacum HOM05D000654 ORTHO05D002330 5.1e-16 89.4 102 59.8
Peaxi162Scf00051g00107 Petunia axillaris HOM05D000654 ORTHO05D002330 4.3e-15 86.3 103 58.3
Peaxi162Scf00745g00852 Petunia axillaris HOM05D004299 ORTHO05D003557 4.0e-13 79.7 181 29.8
PGSC0003DMG400005639 Solanum tuberosum HOM05D001729 ORTHO05D001155 5.2e-13 79.3 114 42.1
Nitab4.5_0001996g0070 Nicotiana tabacum HOM05D000654 ORTHO05D002330 6.8e-13 79.0 103 53.4
PGSC0003DMG400000896 Solanum tuberosum HOM05D000654 ORTHO05D002330 2.6e-12 77.0 103 53.4
Nitab4.5_0001803g0040 Nicotiana tabacum HOM05D000654 ORTHO05D002330 4.4e-12 76.3 103 52.4
Sopen11g007600 Solanum pennellii HOM05D000654 ORTHO05D002330 5.8e-12 75.9 103 52.4
Hma1.2p1_0129F.1_g060210 Hydrangea macrophylla HOM05D000654 ORTHO05D002330 6.4e-11 72.4 115 46.1
PGSC0003DMG400005638 Solanum tuberosum HOM05D001729 ORTHO05D001155 6.4e-11 72.4 100 42.0
MSTRG.1439 Avicennia marina HOM05D000654 ORTHO05D002330 1.6e-09 67.8 65 63.1
SalBow7G1808 Salvia bowleyana HOM05D000654 ORTHO05D002330 3.5e-09 66.6 103 47.6
Migut.N03280 Erythranthe guttata HOM05D000654 ORTHO05D002330 4.6e-09 66.2 103 49.5
Potri.002G083400 Populus trichocarpa HOM05D000654 ORTHO05D002330 2.3e-08 63.9 103 45.6
HanXRQChr05g0151081 Helianthus annuus HOM05D000654 ORTHO05D002330 3.0e-08 63.5 94 48.9
Potri.005G178100 Populus trichocarpa HOM05D000654 ORTHO05D002330 3.9e-08 63.2 65 60.0
Sabra02G0065400 Salix brachista HOM05D000654 ORTHO05D002330 3.9e-08 63.2 103 46.6
Dinv27310 Davidia involucrata HOM05D000654 ORTHO05D002330 1.1e-07 61.6 115 44.3
Manes.02G163500 Manihot esculenta HOM05D000654 ORTHO05D002330 1.1e-07 61.6 103 44.7
Lj7C341T3 Lonicera japonica HOM05D000654 ORTHO05D002330 1.5e-07 61.2 103 42.7
Lju12250C0T2 Lonicera japonica HOM05D000654 ORTHO05D002330 1.5e-07 61.2 103 42.7
MSTRG.25380 Avicennia marina HOM05D000654 ORTHO05D002330 2.5e-07 60.5 103 43.7
Nitab4.5_0000539g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.3e-07 59.7 104 41.3
GSVIVG01008864001 Vitis vinifera HOM05D000654 ORTHO05D002330 4.3e-07 59.7 115 42.6
DCAR_014389 Daucus carota HOM05D000654 ORTHO05D002330 5.6e-07 59.3 104 46.2
Sc16g0009680 Simmondsia chinensis HOM05D000654 ORTHO05D002330 5.6e-07 59.3 60 60.0
CiPaw.05G221200 Carya illinoinensis HOM05D000654 ORTHO05D002330 7.3e-07 58.9 127 41.7
Manes.18G077439 Manihot esculenta HOM05D000654 ORTHO05D002330 7.3e-07 58.9 67 59.7
MELO3C010611.2 Cucumis melo HOM05D000654 ORTHO05D002330 9.6e-07 58.5 113 44.2
RcHm_v2.0_Chr6g0295851 Rosa chinensis HOM05D000654 ORTHO05D002330 9.6e-07 58.5 60 56.7
vmacro12533 Vaccinium macrocarpon HOM05D000654 ORTHO05D002330 9.6e-07 58.5 65 56.9
Actinidia02621 Actinidia chinensis HOM05D000654 ORTHO05D002330 1.3e-06 58.2 115 44.3
CiPaw.03G115400 Carya illinoinensis HOM05D000654 ORTHO05D002330 1.3e-06 58.2 58 60.3
Cpa.g.sc64.89 Carica papaya HOM05D000654 ORTHO05D002330 1.6e-06 57.8 67 53.7
CsaV3_6G034470 Cucumis sativus L. HOM05D000654 ORTHO05D002330 1.6e-06 57.8 113 43.4
Eucgr.F04348 Eucalyptus grandis HOM05D000654 ORTHO05D002330 1.6e-06 57.8 81 50.6
Gorai.009G245900 Gossypium raimondii HOM05D000654 ORTHO05D002330 1.6e-06 57.8 115 40.9
QL10p040142 Quercus lobata HOM05D000654 ORTHO05D002330 1.6e-06 57.8 66 54.5
Cc10_g11930 Coffea canephora HOM05D000654 ORTHO05D002330 2.1e-06 57.4 101 42.6
Rhsim06G0103200 Rhododendron simsii HOM05D000654 ORTHO05D002330 2.1e-06 57.4 98 48.0
TWI79G0039 Tripterygium wilfordii HOM05D000654 ORTHO05D002330 2.1e-06 57.4 58 58.6
Dinv07217 Davidia involucrata HOM05D000654 ORTHO05D002330 2.8e-06 57.0 117 42.7
ECA246G2305 Erigeron canadensis HOM05D000654 ORTHO05D002330 2.8e-06 57.0 114 42.1
Gorai.010G050400 Gossypium raimondii HOM05D000654 ORTHO05D002330 2.8e-06 57.0 116 43.1
SGA_v2.0_scaffold25G11129 Striga asiatica HOM05D000654 ORTHO05D002330 2.8e-06 57.0 110 43.6
TAR376G0691 Trochodendron aralioides HOM05D000654 ORTHO05D002330 2.8e-06 57.0 77 49.4
CSS0013859 Camellia sinensis var. sinensis HOM05D000654 ORTHO05D002330 4.8e-06 56.2 104 43.3
COL.COLO4_12114 Corchorus olitorius HOM05D000654 ORTHO05D002330 4.8e-06 56.2 56 55.4
FAN15G0872 Fragaria x ananassa HOM05D000654 ORTHO05D002330 4.8e-06 56.2 54 59.3
Gohir.A06G044900 Gossypium hirsutum HOM05D000654 ORTHO05D002330 4.8e-06 56.2 116 43.1
Gohir.D06G045400 Gossypium hirsutum HOM05D000654 ORTHO05D002330 6.2e-06 55.8 116 43.1
PSO528G0099 Papaver somniferum HOM05D000654 ORTHO05D002330 6.2e-06 55.8 107 41.1
Gohir.D05G237500 Gossypium hirsutum HOM05D000654 ORTHO05D002330 8.1e-06 55.5 115 40.0
HanXRQChr10g0304071 Helianthus annuus HOM05D000654 ORTHO05D002330 8.1e-06 55.5 95 46.3
Sabra07G0081900 Salix brachista HOM05D000654 ORTHO05D002330 8.1e-06 55.5 58 58.6


User provided reference genes

Program Settings