Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G384.1 Capsicum annuum HOM05D003859 ORTHO05D115631 8.9e-50 199.9 97 100.0
Nitab4.5_0001376g0070 Nicotiana tabacum HOM05D003859 ORTHO05D004927 4.5e-09 64.7 40 77.5
Nitab4.5_0003356g0080 Nicotiana tabacum HOM05D003859 ORTHO05D004927 4.5e-09 64.7 40 77.5
Peaxi162Scf00008g01623 Petunia axillaris HOM05D003859 ORTHO05D004927 4.5e-09 64.7 40 77.5
CAN.G564.2 Capsicum annuum HOM05D003859 ORTHO05D004927 1.7e-08 62.8 40 72.5
Actinidia31457 Actinidia chinensis HOM05D003859 ORTHO05D004927 2.9e-08 62.0 40 72.5
CSS0031587 Camellia sinensis var. sinensis HOM05D003859 ORTHO05D004927 2.9e-08 62.0 40 72.5
Dinv43749 Davidia involucrata HOM05D003859 ORTHO05D004927 3.8e-08 61.6 40 72.5
Solyc10g017810.2 Solanum lycopersicum HOM05D003859 ORTHO05D004927 5.0e-08 61.2 40 70.0
Sopen10g006640 Solanum pennellii HOM05D003859 ORTHO05D004927 5.0e-08 61.2 40 70.0
PGSC0003DMG400010260 Solanum tuberosum HOM05D003859 ORTHO05D004927 5.0e-08 61.2 40 70.0
Cc02_g37100 Coffea canephora HOM05D003859 ORTHO05D004927 1.1e-07 60.1 40 72.5
Dinv32414 Davidia involucrata HOM05D003859 ORTHO05D004927 1.1e-07 60.1 40 70.0
Solyc01g091880.3 Solanum lycopersicum HOM05D003859 ORTHO05D004927 1.1e-07 60.1 40 70.0
Sopen01g037650 Solanum pennellii HOM05D003859 ORTHO05D004927 1.1e-07 60.1 40 70.0
Oeu059223.1 Olea europaea HOM05D003859 ORTHO05D004927 1.9e-07 59.3 40 70.0
DCAR_006900 Daucus carota HOM05D004815 ORTHO05D005742 2.5e-07 58.9 40 65.0
Lj7A522T33 Lonicera japonica HOM05D003859 ORTHO05D004927 2.5e-07 58.9 41 73.2
MD07G1125500 Malus domestica HOM05D003859 ORTHO05D004927 3.2e-07 58.5 40 70.0
Oeu024423.1 Olea europaea HOM05D003859 ORTHO05D004927 3.2e-07 58.5 46 60.9
CSS0002513 Camellia sinensis var. sinensis HOM05D003859 ORTHO05D004927 4.2e-07 58.2 38 71.1
Nitab4.5_0018560g0010 Nicotiana tabacum HOM05D003859 ORTHO05D004927 4.2e-07 58.2 40 65.0
Peaxi162Scf00021g00233 Petunia axillaris HOM05D003859 ORTHO05D004927 4.2e-07 58.2 40 67.5
PGSC0003DMG400000004 Solanum tuberosum HOM05D003859 ORTHO05D004927 4.2e-07 58.2 40 65.0
CAN.G170.60 Capsicum annuum HOM05D003859 ORTHO05D004927 5.5e-07 57.8 40 65.0
HanXRQChr03g0093571 Helianthus annuus HOM05D003859 ORTHO05D004927 5.5e-07 57.8 40 70.0
HanXRQChr12g0358751 Helianthus annuus HOM05D003859 ORTHO05D004927 5.5e-07 57.8 40 70.0
HanXRQChr13g0426071 Helianthus annuus HOM05D003859 ORTHO05D004927 5.5e-07 57.8 40 70.0
vmacro04847 Vaccinium macrocarpon HOM05D003859 ORTHO05D004927 5.5e-07 57.8 40 70.0
ECA240G3688 Erigeron canadensis HOM05D003859 ORTHO05D004927 7.2e-07 57.4 40 70.0
MD09G1001300 Malus domestica HOM05D002143 ORTHO05D002260 7.2e-07 57.4 40 67.5
Nitab4.5_0013229g0030 Nicotiana tabacum HOM05D003859 ORTHO05D004927 7.2e-07 57.4 40 65.0
Lsat_1_v5_gn_7_8061 Lactuca sativa HOM05D003859 ORTHO05D004927 9.3e-07 57.0 40 67.5
MD02G1195500 Malus domestica HOM05D003859 ORTHO05D004927 1.2e-06 56.6 40 67.5
COL.COLO4_12637 Corchorus olitorius HOM05D003859 ORTHO05D004927 2.1e-06 55.8 40 67.5
Peaxi162Scf00716g00430 Petunia axillaris HOM05D003859 ORTHO05D010544 2.1e-06 55.8 40 65.0
Duzib138G0997 Durio zibethinus HOM05D003859 ORTHO05D004927 2.7e-06 55.5 40 65.0
Rhsim01G0155900 Rhododendron simsii HOM05D003859 ORTHO05D004927 2.7e-06 55.5 40 67.5
Thecc.01G370000 Theobroma cacao HOM05D003859 ORTHO05D004927 2.7e-06 55.5 40 67.5
Cpa.g.sc18.179 Carica papaya HOM05D003859 ORTHO05D004927 3.6e-06 55.1 40 65.0
Peaxi162Scf00120g00061 Petunia axillaris HOM05D003859 ORTHO05D004927 3.6e-06 55.1 40 65.0
THA.LOC104801464 Tarenaya hassleriana HOM05D003859 ORTHO05D004927 3.6e-06 55.1 40 62.5
Lsat_1_v5_gn_3_134960 Lactuca sativa HOM05D003859 ORTHO05D004927 4.6e-06 54.7 40 67.5
vmacro13346 Vaccinium macrocarpon HOM05D003859 ORTHO05D004927 4.6e-06 54.7 40 65.0
Gohir.A08G128900 Gossypium hirsutum HOM05D003859 ORTHO05D004927 6.1e-06 54.3 40 65.0
Gohir.D08G150100 Gossypium hirsutum HOM05D003859 ORTHO05D004927 6.1e-06 54.3 40 65.0
Actinidia33450 Actinidia chinensis HOM05D003859 ORTHO05D004927 7.9e-06 53.9 41 68.3
AT1G01910 Arabidopsis thaliana HOM05D003859 ORTHO05D004927 7.9e-06 53.9 40 62.5
CANSAT56G3485 Cannabis sativa HOM05D003859 ORTHO05D004927 7.9e-06 53.9 40 60.0
DCAR_008580 Daucus carota HOM05D003859 ORTHO05D004927 7.9e-06 53.9 40 60.0
Gorai.004G155900 Gossypium raimondii HOM05D003859 ORTHO05D004927 7.9e-06 53.9 40 65.0
SHI13484 Sapria himalayana HOM05D003859 ORTHO05D004927 7.9e-06 53.9 40 67.5


User provided reference genes

Program Settings