Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 1.4e-102 376.3 189 100.0
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 2.2e-89 332.4 189 86.2
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 2.9e-89 332.0 189 85.7
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 5.0e-89 331.3 191 86.9
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 8.5e-89 330.5 191 86.9
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.9e-88 329.3 189 86.8
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.5e-85 319.7 190 83.7
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 1.0e-73 280.4 189 74.6
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 9.5e-72 273.9 188 73.4
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.6e-69 265.8 189 71.4
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 5.4e-67 258.1 186 70.4
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 1.2e-66 256.9 186 66.7
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 2.0e-66 256.1 190 68.9
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.0e-65 253.8 189 66.1
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 3.9e-65 251.9 191 67.5
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 1.5e-64 250.0 189 65.1
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 2.5e-64 249.2 189 63.0
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 3.3e-64 248.8 194 64.4
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 4.3e-64 248.4 190 64.2
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 7.3e-64 247.7 192 65.1
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 9.5e-64 247.3 189 63.0
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 1.2e-63 246.9 189 62.4
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 1.6e-63 246.5 190 63.7
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.1e-63 246.1 189 63.0
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 2.1e-63 246.1 197 63.5
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 2.8e-63 245.7 192 64.1
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 4.7e-63 245.0 189 63.0
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 3.1e-62 242.3 189 60.8
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 6.8e-62 241.1 189 60.3
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 6.8e-62 241.1 189 64.6
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 8.9e-62 240.7 189 65.1
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 1.2e-61 240.4 189 62.4
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 2.0e-61 239.6 197 62.9
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 4.4e-61 238.4 189 60.3
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 9.8e-61 237.3 189 61.9
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 1.7e-60 236.5 192 62.5
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 2.9e-60 235.7 190 63.7
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 2.9e-60 235.7 190 63.7
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 3.7e-60 235.3 190 60.5
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 4.9e-60 235.0 188 62.2
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 6.4e-60 234.6 189 62.4
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 6.4e-60 234.6 189 60.3
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 1.1e-59 233.8 189 61.9
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.9e-59 233.0 192 63.0
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 2.4e-59 232.6 189 61.4
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 4.1e-59 231.9 189 60.8
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 4.1e-59 231.9 189 59.8
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 9.2e-59 230.7 198 59.6
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 9.2e-59 230.7 189 60.3
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.6e-58 229.9 191 63.4
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 2.1e-58 229.6 189 60.8
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 2.1e-58 229.6 189 59.3
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 2.1e-58 229.6 159 76.1
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 3.5e-58 228.8 189 61.4
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 3.5e-58 228.8 195 61.5
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 4.6e-58 228.4 189 59.3
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 4.6e-58 228.4 189 59.3
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 6.0e-58 228.0 189 58.7
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 6.0e-58 228.0 188 62.2
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 1.3e-57 226.9 189 58.7
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 1.7e-57 226.5 191 60.7
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 1.7e-57 226.5 198 59.1
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.7e-57 226.5 189 59.8
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 2.3e-57 226.1 192 60.4
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 3.0e-57 225.7 198 60.1
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 3.0e-57 225.7 189 57.1
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 3.9e-57 225.3 198 59.6
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 3.9e-57 225.3 188 62.2
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 8.6e-57 224.2 193 61.7
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 1.1e-56 223.8 185 58.9
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.9e-56 223.0 189 58.2
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 3.3e-56 222.2 190 61.1
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 4.3e-56 221.9 190 62.1
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 4.3e-56 221.9 190 61.1
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 9.5e-56 220.7 188 60.6
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 9.5e-56 220.7 188 60.6
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.6e-55 219.9 189 57.7
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 2.1e-55 219.5 200 61.5
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.8e-55 219.2 188 60.1
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 3.6e-55 218.8 190 60.0
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 3.6e-55 218.8 188 60.1
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 4.7e-55 218.4 195 57.4
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 6.8e-54 214.5 186 60.8
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 8.9e-54 214.2 251 48.2
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 3.7e-52 208.8 223 50.2
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 3.7e-52 208.8 200 58.0
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.5e-50 202.2 161 65.2
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 6.0e-50 201.4 175 57.1
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 6.6e-49 198.0 145 59.3
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 8.6e-49 197.6 188 56.4
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 1.2e-47 193.7 147 62.6
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 1.4e-46 190.3 161 60.2
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 1.8e-46 189.9 142 62.0
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 8.9e-46 187.6 151 60.9
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 5.8e-45 184.9 145 68.3
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.3e-44 183.7 193 53.9
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.9e-44 182.6 140 65.0
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 8.7e-41 171.0 96 90.6
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 2.5e-40 169.5 189 49.2
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 4.3e-40 168.7 156 53.2
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 6.9e-38 161.4 190 47.4
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 1.2e-34 150.6 193 47.2
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 1.6e-34 150.2 89 80.9
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 1.3e-33 147.1 132 54.5
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 8.7e-33 144.4 180 44.4
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 5.8e-29 131.7 190 45.3
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 1.9e-27 126.7 87 65.5
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 1.9e-27 126.7 120 50.0
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 5.1e-25 118.6 161 39.1
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.0e-21 106.7 118 47.5
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 1.3e-20 104.0 159 35.8
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 3.8e-20 102.4 96 50.0
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 9.3e-19 97.8 75 64.0
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 1.2e-18 97.4 121 38.8
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.8e-17 93.6 87 59.8
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.7e-15 85.9 66 68.2
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 2.5e-11 73.2 100 43.0
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 7.1e-11 71.6 126 28.6
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 4.3e-08 62.4 47 66.0


User provided reference genes

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