Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 0.0e+00 1110.9 580 100.0
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 2.3e-265 918.7 592 81.2
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 1.5e-264 916.0 586 80.9
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 3.3e-264 914.8 610 79.3
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 3.0e-262 908.3 599 81.5
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 2.7e-258 895.2 599 80.6
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 1.9e-256 889.0 599 80.3
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 4.3e-216 755.0 606 67.7
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 4.0e-214 748.4 590 69.0
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 1.2e-213 746.9 607 66.9
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 4.2e-211 738.4 595 67.9
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 9.3e-211 737.3 597 67.0
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 3.9e-209 731.9 595 63.9
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 5.6e-208 728.0 584 65.6
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 1.3e-204 716.8 609 64.0
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.3e-204 716.8 609 61.7
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 4.9e-204 714.9 582 67.5
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 7.1e-203 711.1 598 63.7
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 2.5e-200 702.6 588 64.6
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 3.3e-200 702.2 632 57.9
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 3.7e-199 698.7 579 62.0
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 2.0e-197 693.0 612 63.1
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 5.8e-197 691.4 584 62.5
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 7.6e-197 691.0 582 63.1
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 4.9e-196 688.3 585 61.9
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 6.5e-196 688.0 591 60.4
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.4e-195 686.8 592 62.0
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 1.4e-195 686.8 599 62.9
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.2e-194 683.7 595 61.8
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 1.2e-194 683.7 593 62.2
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 1.2e-194 683.7 592 61.3
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 2.1e-194 682.9 605 59.8
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 6.0e-194 681.4 581 61.1
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 1.1e-192 677.2 596 59.4
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 2.2e-188 662.9 583 59.9
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 2.9e-188 662.5 633 55.5
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 3.8e-188 662.1 550 62.0
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 8.5e-188 661.0 549 60.1
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 1.4e-187 660.2 593 57.8
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 3.6e-186 655.6 619 57.4
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 4.6e-186 655.2 491 67.6
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 4.6e-186 655.2 602 57.1
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 1.0e-185 654.1 592 59.1
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.8e-185 653.3 602 56.6
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 2.3e-185 652.9 604 56.5
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 3.9e-185 652.1 591 59.1
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 8.8e-185 651.0 602 56.3
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 1.1e-184 650.6 517 61.7
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 1.1e-184 650.6 593 62.7
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 1.5e-184 650.2 606 57.3
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 2.5e-184 649.4 588 58.3
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 1.3e-183 647.1 586 58.7
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 8.2e-183 644.4 590 56.3
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 3.1e-182 642.5 593 59.0
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 4.1e-182 642.1 546 61.5
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 6.9e-182 641.3 604 58.9
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 6.9e-182 641.3 594 59.1
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 1.2e-181 640.6 540 61.9
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 4.5e-181 638.6 592 57.3
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 1.3e-180 637.1 554 57.8
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 1.7e-180 636.7 586 56.7
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.7e-180 636.7 554 58.5
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 3.8e-180 635.6 590 55.3
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 2.5e-179 632.9 596 55.4
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 5.5e-179 631.7 606 54.8
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 5.5e-179 631.7 559 57.6
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 9.4e-179 630.9 573 57.4
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 3.6e-178 629.0 568 57.4
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 4.7e-178 628.6 622 56.6
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 7.9e-178 627.9 603 57.9
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 2.3e-177 626.3 616 54.2
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 8.8e-177 624.4 557 57.3
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 2.0e-176 623.2 541 58.8
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 4.4e-176 622.1 474 65.6
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 5.7e-176 621.7 610 55.9
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 9.7e-176 620.9 609 54.8
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 1.7e-175 620.2 617 55.6
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 1.8e-174 616.7 609 53.9
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.8e-174 616.7 487 70.2
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 5.3e-174 615.1 614 54.1
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 7.0e-174 614.8 617 53.3
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 7.0e-174 614.8 510 61.4
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 1.2e-173 614.0 618 54.4
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 3.5e-173 612.5 608 53.9
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 3.5e-173 612.5 608 53.9
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 7.7e-173 611.3 489 62.8
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 1.7e-172 610.1 615 54.5
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 3.2e-171 605.9 567 60.0
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 9.4e-171 604.4 603 54.1
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 8.8e-169 597.8 498 60.2
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 2.2e-159 566.6 489 58.5
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 6.3e-159 565.1 586 54.4
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.7e-151 540.4 588 52.2
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.5e-147 526.6 535 51.6
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 1.0e-137 494.6 402 61.4
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 7.5e-136 488.4 491 51.3
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 1.7e-132 477.2 618 45.5
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 3.0e-132 476.5 435 55.9
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 1.2e-130 471.1 500 49.2
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 3.0e-124 449.9 415 58.1
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.1e-109 400.6 353 63.2
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 2.5e-99 367.1 340 59.7
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 3.3e-83 313.5 468 36.8
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 3.0e-44 184.1 441 33.1
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 5.2e-44 183.3 281 37.0
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 1.2e-43 182.2 467 29.6
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 9.8e-43 179.1 285 36.5
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 1.9e-38 164.9 440 27.0
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.1e-33 149.1 93 69.9
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 4.3e-30 137.1 108 68.5
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 5.6e-30 136.7 90 66.7
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 3.9e-23 114.0 75 66.7
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.8e-20 105.1 63 74.6
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.5e-19 102.1 80 58.8
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 1.5e-19 102.1 87 52.9
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 2.6e-19 101.3 235 30.2
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 4.7e-13 80.5 56 73.2


User provided reference genes

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