Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 7.4e-264 913.3 456 100.0
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 5.0e-252 874.0 456 95.0
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 8.5e-252 873.2 456 94.7
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 1.1e-251 872.8 456 94.5
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 1.4e-246 855.9 456 93.0
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 1.5e-243 845.9 456 92.1
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 2.8e-239 831.6 454 89.6
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 3.1e-209 731.9 461 78.1
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 1.5e-208 729.6 460 77.0
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 2.0e-208 729.2 454 77.8
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 4.6e-205 718.0 457 75.7
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 2.5e-203 712.2 460 77.0
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 2.6e-200 702.2 460 74.6
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 3.2e-198 695.3 463 74.1
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 2.1e-197 692.6 463 73.7
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 6.6e-196 687.6 466 74.0
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 1.5e-195 686.4 461 74.2
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.9e-195 686.0 473 72.7
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 7.3e-195 684.1 460 75.0
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 1.5e-192 676.4 462 71.0
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 4.5e-192 674.9 461 72.7
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 5.8e-192 674.5 458 71.8
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 7.6e-192 674.1 460 71.3
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 9.9e-192 673.7 462 70.8
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 1.7e-191 672.9 460 72.0
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 2.2e-191 672.5 477 70.2
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 4.9e-191 671.4 459 72.1
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 8.4e-191 670.6 455 71.9
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 1.1e-190 670.2 455 72.5
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 2.4e-190 669.1 463 71.5
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 5.4e-190 667.9 459 71.0
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 1.2e-189 666.8 455 71.4
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 7.9e-189 664.1 455 72.1
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 1.0e-188 663.7 459 70.8
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 6.7e-188 661.0 460 71.1
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 1.5e-187 659.8 462 70.6
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.5e-187 659.8 455 70.8
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 1.5e-187 659.8 457 70.5
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 7.4e-187 657.5 463 70.0
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 7.4e-187 657.5 462 71.0
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 1.3e-186 656.8 462 70.1
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 1.3e-186 656.8 464 69.8
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 1.3e-186 656.8 457 70.0
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 1.6e-186 656.4 460 69.8
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 2.8e-186 655.6 462 69.5
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 3.7e-186 655.2 462 70.1
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 3.7e-186 655.2 463 69.3
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 3.7e-186 655.2 462 69.9
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 3.7e-186 655.2 477 68.1
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 3.7e-186 655.2 457 69.8
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 6.2e-186 654.4 462 70.6
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 6.2e-186 654.4 448 71.0
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 1.1e-185 653.7 461 70.1
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 1.4e-185 653.3 473 68.7
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 2.4e-185 652.5 458 71.2
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 5.3e-185 651.4 457 72.0
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 6.9e-185 651.0 454 70.3
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.5e-184 648.3 455 70.1
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 9.9e-184 647.1 456 70.4
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 9.9e-184 647.1 456 70.4
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 2.2e-183 646.0 462 68.4
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 2.9e-183 645.6 453 70.4
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 3.8e-183 645.2 458 70.3
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 8.4e-183 644.0 462 68.6
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 1.1e-182 643.7 458 67.9
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 3.2e-182 642.1 464 68.8
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 5.5e-182 641.3 450 69.8
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 7.1e-182 641.0 461 68.1
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 9.3e-182 640.6 459 67.5
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 9.3e-182 640.6 426 73.9
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.1e-181 639.4 459 69.7
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 5.1e-180 634.8 454 68.9
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 9.6e-179 630.6 461 68.8
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 1.3e-178 630.2 459 66.9
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 2.8e-178 629.0 460 68.3
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 1.8e-177 626.3 481 66.9
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 3.1e-177 625.5 460 67.2
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 1.5e-176 623.2 501 63.1
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 2.0e-176 622.9 463 66.1
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 2.2e-175 619.4 458 66.4
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 2.2e-175 619.4 461 67.9
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 3.8e-175 618.6 445 69.2
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 1.1e-174 617.1 469 66.3
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.3e-172 610.1 457 66.3
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 2.5e-171 605.9 513 60.6
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 6.1e-165 584.7 471 64.8
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 5.1e-164 581.6 456 63.6
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 3.3e-163 578.9 396 70.5
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 2.2e-162 576.2 401 69.1
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 2.4e-161 572.8 457 63.9
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 1.3e-159 567.0 460 62.0
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 5.1e-156 555.1 411 65.5
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 2.2e-154 549.7 427 64.6
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 6.3e-154 548.1 462 61.3
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 3.6e-149 532.3 462 61.0
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 1.7e-146 523.5 474 59.9
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 1.4e-132 477.2 450 52.4
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 3.0e-132 476.1 311 76.2
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 4.4e-131 472.2 420 61.0
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 1.9e-126 456.8 342 65.5
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 8.6e-119 431.4 299 72.2
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 2.2e-114 416.8 281 70.5
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 2.0e-107 393.7 303 64.7
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.9e-102 377.1 332 60.8
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 1.8e-100 370.5 462 45.5
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.8e-100 370.5 345 58.0
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 3.1e-92 343.2 462 45.9
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 5.8e-91 339.0 413 44.6
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 9.2e-89 331.6 378 49.7
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 1.3e-87 327.8 463 42.5
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 6.2e-85 318.9 466 38.2
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 1.4e-84 317.8 455 41.5
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 7.6e-83 312.0 225 64.4
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 7.6e-83 312.0 301 55.5
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 3.6e-77 293.1 231 64.5
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 1.2e-72 278.1 243 62.1
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 7.4e-70 268.9 254 52.8
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 3.4e-59 233.4 119 94.1
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 2.9e-58 230.3 164 65.2
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 2.3e-55 220.7 161 67.1
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 1.4e-44 184.9 158 63.9
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 4.7e-40 169.9 128 68.0
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 9.7e-38 162.2 124 63.7
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 2.2e-37 161.0 120 65.8
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 8.2e-37 159.1 123 61.8
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 1.2e-35 155.2 82 90.2
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 1.2e-24 118.6 102 63.7
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 4.8e-21 106.7 413 26.4
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 3.5e-19 100.5 103 53.4
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 1.8e-15 88.2 52 76.9
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 4.1e-12 77.0 63 61.9
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 3.5e-11 73.9 54 72.2


User provided reference genes

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