Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G371.43 Capsicum annuum HOM05D004348 ORTHO05D006191 1.0e-106 390.2 209 100.0
PGSC0003DMG400007988 Solanum tuberosum HOM05D004348 ORTHO05D006191 7.3e-49 198.0 172 70.3
Solyc04g079280.4 Solanum lycopersicum HOM05D004348 ORTHO05D006191 1.6e-48 196.8 172 70.9
Sopen04g032870 Solanum pennellii HOM05D004348 ORTHO05D006191 1.4e-47 193.7 172 69.8
Nitab4.5_0000068g0550 Nicotiana tabacum HOM05D004348 ORTHO05D006191 3.4e-46 189.1 176 69.3
Nitab4.5_0005301g0040 Nicotiana tabacum HOM05D004348 ORTHO05D006191 3.8e-45 185.7 173 69.4
Peaxi162Scf00528g00825 Petunia axillaris HOM05D004348 ORTHO05D006191 5.1e-34 148.7 166 60.2
Cc10_g04460 Coffea canephora HOM05D004348 ORTHO05D006191 2.2e-29 133.3 195 48.2
Thecc.08G012500 Theobroma cacao HOM05D004348 ORTHO05D006191 6.4e-29 131.7 221 44.8
Gohir.D01G106800 Gossypium hirsutum HOM05D004348 ORTHO05D006191 1.4e-28 130.6 217 47.0
Gorai.002G131100 Gossypium raimondii HOM05D004348 ORTHO05D006191 3.2e-28 129.4 217 45.6
TAR625G1112 Trochodendron aralioides HOM05D004348 ORTHO05D006191 2.1e-27 126.7 194 49.5
Nn5g30212 Nelumbo nucifera HOM05D004348 ORTHO05D006191 2.7e-27 126.3 195 50.3
Oeu003300.1 Olea europaea HOM05D004348 ORTHO05D006191 7.9e-27 124.8 168 49.4
Dinv39334 Davidia involucrata HOM05D004348 ORTHO05D006191 3.9e-26 122.5 195 48.2
Lj4A53T53 Lonicera japonica HOM05D004348 ORTHO05D006191 1.5e-25 120.6 201 48.3
Oeu057258.1 Olea europaea HOM05D004348 ORTHO05D006191 1.9e-25 120.2 180 47.2
COL.COLO4_26463 Corchorus olitorius HOM05D004348 ORTHO05D006191 2.5e-25 119.8 213 42.3
Hma1.2p1_0337F.1_g129300 Hydrangea macrophylla HOM05D004348 ORTHO05D006191 2.5e-25 119.8 202 46.0
Cfa018516 Carpinus fangiana HOM05D004348 ORTHO05D006191 3.3e-25 119.4 185 48.1
GSVIVG01009553001 Vitis vinifera HOM05D004348 ORTHO05D006191 1.6e-24 117.1 191 47.1
Duzib093G0393 Durio zibethinus HOM05D004348 ORTHO05D006191 2.8e-24 116.3 209 43.5
Sabra14G0024200 Salix brachista HOM05D004348 ORTHO05D006191 8.1e-24 114.8 220 43.6
Potri.014G034100 Populus trichocarpa HOM05D004348 ORTHO05D006191 1.1e-23 114.4 220 43.2
Thhalv10024246m.g Eutrema salsugineum HOM05D004348 ORTHO05D006191 1.8e-23 113.6 178 50.0
vmacro21553 Vaccinium macrocarpon HOM05D004348 ORTHO05D006191 1.8e-23 113.6 191 45.0
Lalb_Chr24g0399211 Lupinus albus HOM05D004348 ORTHO05D006191 2.4e-23 113.2 155 49.0
CSS0012651 Camellia sinensis var. sinensis HOM05D004348 ORTHO05D006191 5.3e-23 112.1 199 44.2
Haze_17559 Corylus avellana HOM05D004348 ORTHO05D006191 9.0e-23 111.3 187 47.1
RcHm_v2.0_Chr6g0307221 Rosa chinensis HOM05D004348 ORTHO05D006191 9.0e-23 111.3 198 43.4
Sp7g32110 Schrenkiella parvula HOM05D004348 ORTHO05D006191 9.0e-23 111.3 189 45.5
AL7G16960 Arabidopsis lyrata HOM05D004348 ORTHO05D006191 1.2e-22 110.9 113 59.3
MELO3C016737.2 Cucumis melo HOM05D004348 ORTHO05D006191 1.2e-22 110.9 197 46.7
A01p04110 Brassica napus HOM05D004348 ORTHO05D006191 3.4e-22 109.4 183 49.2
Lsat_1_v5_gn_1_20621 Lactuca sativa HOM05D004348 ORTHO05D006191 4.5e-22 109.0 192 43.8
Atru.chr1.1668 Acer truncatum HOM05D004348 ORTHO05D006191 5.8e-22 108.6 203 43.3
CiPaw.16G046500 Carya illinoinensis HOM05D004348 ORTHO05D006191 5.8e-22 108.6 194 44.8
Atru.chr13.637 Acer truncatum HOM05D004348 ORTHO05D006191 1.0e-21 107.8 221 43.9
Aa31LG2G16170 Aethionema arabicum HOM05D004348 ORTHO05D006191 1.7e-21 107.1 183 43.7
Manes.05G171200 Manihot esculenta HOM05D004348 ORTHO05D006191 2.2e-21 106.7 149 47.7
ClCG05G019730 Citrullus lanatus HOM05D004348 ORTHO05D006191 3.8e-21 105.9 189 43.9
BolC1t00433H Brassica oleracea HOM05D004348 ORTHO05D006191 4.9e-21 105.5 185 46.5
PGR031G2748 Punica granatum HOM05D004348 ORTHO05D006191 4.9e-21 105.5 186 44.1
BraA01t00399Z Brassica rapa HOM05D004348 ORTHO05D006191 6.5e-21 105.1 183 48.1
THA.LOC104806947 Tarenaya hassleriana HOM05D004348 ORTHO05D006191 8.4e-21 104.8 194 42.8
C01p04470 Brassica napus HOM05D004348 ORTHO05D006191 1.1e-20 104.4 185 45.9
Prupe.1G440200 Prunus persica HOM05D004348 ORTHO05D006191 7.1e-20 101.7 201 41.8
FAN15G1136 Fragaria x ananassa HOM05D004348 ORTHO05D006191 9.3e-20 101.3 192 42.7
FAN27G3414 Fragaria x ananassa HOM05D004348 ORTHO05D006191 9.3e-20 101.3 192 42.7
MD15G1086600 Malus domestica HOM05D004348 ORTHO05D006191 1.2e-19 100.9 201 42.8
FvH4_2g34840 Fragaria vesca HOM05D004348 ORTHO05D006191 1.6e-19 100.5 193 42.5
PSO675G6987 Papaver somniferum HOM05D004348 ORTHO05D006191 1.6e-19 100.5 186 42.5
Sc02g0006980 Simmondsia chinensis HOM05D004348 ORTHO05D006191 1.6e-19 100.5 235 37.4
Glyma.17G244300 Glycine max HOM05D004348 ORTHO05D006191 2.1e-19 100.1 169 44.4
HPP92_019297 Vanilla planifolia HOM05D004348 ORTHO05D006191 3.5e-19 99.4 188 42.0
SHI08301 Sapria himalayana HOM05D004348 ORTHO05D006191 1.0e-18 97.8 163 40.5
CDE10G0919 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 1.3e-18 97.4 122 48.4
HanXRQChr02g0038751 Helianthus annuus HOM05D004348 ORTHO05D006191 1.8e-18 97.1 211 39.8
Cpa.g.c24415.13 Carica papaya HOM05D004348 ORTHO05D006191 2.3e-18 96.7 184 44.6
Lsat_1_v5_gn_8_33681 Lactuca sativa HOM05D004348 ORTHO05D006191 2.3e-18 96.7 137 48.2
Lj5g0025546 Lotus japonicus HOM05D004348 ORTHO05D006191 6.7e-18 95.1 169 43.2
MBI06_g27707_MAGBIO Magnolia biondii HOM05D004348 ORTHO05D006191 1.5e-17 94.0 177 42.9
MD08G1105600 Malus domestica HOM05D004348 ORTHO05D006191 2.5e-17 93.2 117 52.1
unitig_26.g10059 Utricularia gibba HOM05D004348 ORTHO05D006191 2.5e-17 93.2 165 43.6
arahy.Tifrunner.gnm1.ann1.2EEB7P Arachis hypogaea HOM05D004348 ORTHO05D006191 7.4e-17 91.7 201 39.3
arahy.Tifrunner.gnm1.ann1.3D95JG Arachis hypogaea HOM05D004348 ORTHO05D006191 7.4e-17 91.7 201 39.3
CDE10G0798 Ceratophyllum demersum HOM05D004348 ORTHO05D006191 1.3e-16 90.9 184 38.0
Phvul.001G020000 Phaseolus vulgaris HOM05D004348 ORTHO05D006191 1.3e-16 90.9 182 43.4
QL02p005708 Quercus lobata HOM05D004348 ORTHO05D006191 1.3e-16 90.9 198 40.4
Rhsim06G0047100 Rhododendron simsii HOM05D004348 ORTHO05D006191 1.3e-16 90.9 209 37.8
SGA_v2.0_scaffold226G43137 Striga asiatica HOM05D004348 ORTHO05D006191 1.6e-16 90.5 98 55.1
TPR.G13698 Trifolium pratense HOM05D004348 ORTHO05D006191 3.7e-16 89.4 106 52.8
Aqoxy5G01277 Aquilegia oxysepala HOM05D004348 ORTHO05D006191 8.2e-16 88.2 200 42.5
Migut.N02696 Erythranthe guttata HOM05D004348 ORTHO05D006191 1.4e-15 87.4 175 42.9
Psat6g012000 Pisum sativum HOM05D004348 ORTHO05D006191 1.4e-15 87.4 192 40.6
CANSAT78G0057 Cannabis sativa HOM05D004348 ORTHO05D006191 2.4e-15 86.7 154 45.5
Medtr1g019960 Medicago truncatula HOM05D004348 ORTHO05D006191 2.4e-15 86.7 212 38.2
Zm00001eb006390 Zea mays HOM05D004348 ORTHO05D006191 5.3e-15 85.5 80 62.5
HanXRQChr16g0507461 Helianthus annuus HOM05D004348 ORTHO05D006191 6.9e-15 85.1 169 45.0
ECA247G1923 Erigeron canadensis HOM05D004348 ORTHO05D006191 1.5e-14 84.0 210 38.6
Ca_13305_v3 Cicer arietinum L. HOM05D004348 ORTHO05D006191 2.0e-14 83.6 211 38.9
EL10Ac1g01783 Beta vulgaris HOM05D004348 ORTHO05D006191 2.6e-14 83.2 101 45.5
Sed0012719 Sechium edule HOM05D004348 ORTHO05D006191 2.6e-14 83.2 160 39.4
VMungo0647G0261 Vigna mungo HOM05D004348 ORTHO05D006191 5.8e-14 82.0 176 40.3
ATR1159G040 Amborella trichopoda HOM05D004348 ORTHO05D006191 1.7e-13 80.5 187 39.6
DCAR_020931 Daucus carota HOM05D004348 ORTHO05D006191 3.8e-13 79.3 69 65.2
Lsat_1_v5_gn_9_98160 Lactuca sativa HOM05D004348 ORTHO05D005602 1.6e-11 73.9 79 60.8
Lsat_1_v5_gn_4_124060 Lactuca sativa HOM05D004348 ORTHO05D006191 2.7e-11 73.2 168 36.9
Hund26625 Selenicereus undatus HOM05D004348 ORTHO05D006191 5.1e-10 68.9 184 36.4
AUR62022445 Chenopodium quinoa HOM05D004348 ORTHO05D006191 2.5e-09 66.6 74 59.5
AUR62039313 Chenopodium quinoa HOM05D004348 ORTHO05D006191 2.5e-09 66.6 74 59.5
Eucgr.F02367 Eucalyptus grandis HOM05D004348 ORTHO05D006191 1.4e-07 60.8 196 38.3
SEGI_03645 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 2.4e-07 60.1 162 34.6
SEGI_30856 Sequoiadendron giganteum HOM05D004348 ORTHO05D006191 2.4e-07 60.1 162 34.6


User provided reference genes

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