Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G370.37 Capsicum annuum HOM05D003617 ORTHO05D010478 3.2e-53 211.5 104 100.0
CAN.G68.7 Capsicum annuum HOM05D003617 ORTHO05D010478 5.3e-40 167.5 101 82.2
CAN.G34.10 Capsicum annuum HOM05D003617 ORTHO05D010478 2.2e-38 162.2 103 76.7
CAN.G1362.2 Capsicum annuum HOM05D003617 ORTHO05D010478 4.2e-37 157.9 93 83.9
CAN.G108.56 Capsicum annuum HOM05D003617 ORTHO05D010478 2.3e-35 152.1 101 74.3
CAN.G41.3 Capsicum annuum HOM05D003617 ORTHO05D010478 2.5e-21 105.5 107 57.0
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 2.2e-14 82.4 104 45.2
CAN.G474.5 Capsicum annuum HOM05D001802 ORTHO05D010478 2.9e-14 82.0 55 70.9
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.0e-14 81.3 89 52.8
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.4e-13 79.7 106 45.3
CAN.G626.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.9e-13 79.3 100 46.0
CAN.G908.5 Capsicum annuum HOM05D003617 ORTHO05D010478 3.2e-13 78.6 104 43.3
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.2e-13 78.6 103 46.6
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.2e-13 77.4 86 51.2
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 7.2e-13 77.4 97 46.4
CAN.G1658.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.6e-12 76.3 105 42.9
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.6e-12 76.3 89 50.6
CAN.G1323.7 Capsicum annuum HOM05D003617 ORTHO05D010478 4.6e-12 74.7 102 45.1
Nitab4.5_0000095g0090 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.6e-12 74.7 98 41.8
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.6e-12 74.7 89 48.3
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.6e-12 74.7 88 48.9
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.1e-12 74.3 92 46.7
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 6.1e-12 74.3 103 40.8
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 6.1e-12 74.3 103 40.8
CAN.G1329.39 Capsicum annuum HOM05D003617 ORTHO05D010478 7.9e-12 73.9 104 40.4
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.4e-11 73.2 84 51.2
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.8e-11 72.8 97 45.4
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-11 72.4 99 46.5
Nitab4.5_0001995g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.3e-11 72.4 102 43.1
Nitab4.5_0004188g0040 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-11 72.4 84 47.6
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.3e-11 72.4 89 47.2
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 2.3e-11 72.4 103 40.8
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 3.0e-11 72.0 103 41.7
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.0e-11 72.0 84 48.8
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.0e-11 72.0 84 48.8
PGSC0003DMG400012065 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.0e-11 72.0 103 41.7
CAN.G275.8 Capsicum annuum HOM05D003617 ORTHO05D010478 3.9e-11 71.6 104 42.3
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.9e-11 71.6 82 50.0
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 3.9e-11 71.6 104 40.4
CAN.G1525.6 Capsicum annuum HOM05D000995 ORTHO05D007165 6.7e-11 70.9 103 41.7
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.7e-11 70.9 84 51.2
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 8.8e-11 70.5 97 43.3
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.0e-10 69.3 84 48.8
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 2.0e-10 69.3 77 48.1
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 2.0e-10 69.3 102 42.2
PGSC0003DMG400044625 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.0e-10 69.3 98 40.8
CAN.G626.1 Capsicum annuum HOM05D003617 ORTHO05D010478 2.5e-10 68.9 104 39.4
Sopen05g012010 Solanum pennellii HOM05D000002 ORTHO05D010478 3.3e-10 68.6 103 38.8
CAN.G108.23 Capsicum annuum HOM05D003617 ORTHO05D010478 4.3e-10 68.2 104 39.4
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.3e-10 68.2 87 43.7
PGSC0003DMG400044334 Solanum tuberosum HOM05D003617 ORTHO05D010478 7.4e-10 67.4 80 42.5
CAN.G735.4 Capsicum annuum HOM05D003617 ORTHO05D010478 9.7e-10 67.0 104 40.4
PGSC0003DMG400043386 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.3e-09 66.6 84 44.0
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.7e-09 66.2 89 46.1
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.2e-09 65.9 66 48.5
Sopen05g021300 Solanum pennellii HOM05D000995 ORTHO05D012246 2.8e-09 65.5 103 37.9
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 2.8e-09 65.5 65 49.2
Nitab4.5_0000481g0030 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.8e-09 64.7 99 38.4
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 4.8e-09 64.7 64 50.0
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 6.3e-09 64.3 103 36.9
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 8.2e-09 63.9 84 42.9
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-08 63.2 63 52.4
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.4e-08 63.2 101 36.6
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.1e-08 62.0 62 53.2
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.1e-08 62.0 89 43.8
PGSC0003DMG400003176 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.1e-08 62.0 105 36.2
Nitab4.5_0001939g0070 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.3e-08 61.2 64 48.4
CAN.G27.12 Capsicum annuum HOM05D000995 ORTHO05D000638 6.9e-08 60.8 34 79.4
Sopen02g010350 Solanum pennellii HOM05D003617 ORTHO05D010478 9.1e-08 60.5 101 36.6
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 1.2e-07 60.1 75 41.3
PGSC0003DMG400039284 Solanum tuberosum HOM05D003617 ORTHO05D010478 3.4e-07 58.5 99 38.4
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.5e-07 58.2 97 40.2
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 5.9e-07 57.8 88 38.6
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 1.3e-06 56.6 75 40.0
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 1.3e-06 56.6 55 47.3
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 1.7e-06 56.2 102 38.2
Nitab4.5_0003674g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.5e-06 54.3 99 35.4


User provided reference genes

Program Settings