Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G370.20 Capsicum annuum HOM05D000251 ORTHO05D005532 1.1e-53 213.0 106 100.0
CAN.G61.27 Capsicum annuum HOM05D000251 ORTHO05D005532 2.3e-51 205.3 104 98.1
PGSC0003DMG400009218 Solanum tuberosum HOM05D000251 ORTHO05D005532 4.0e-51 204.5 104 98.1
Nitab4.5_0006666g0010 Nicotiana tabacum HOM05D000251 ORTHO05D005532 1.2e-50 203.0 104 96.2
Sopen11g009100 Solanum pennellii HOM05D000251 ORTHO05D005532 1.2e-50 203.0 104 96.2
Peaxi162Scf00495g00120 Petunia axillaris HOM05D000251 ORTHO05D005532 1.7e-49 199.1 104 94.2
Nitab4.5_0000159g0190 Nicotiana tabacum HOM05D000251 ORTHO05D005532 2.8e-49 198.4 104 94.2
Lj8C560G4 Lonicera japonica HOM05D000251 ORTHO05D005532 3.8e-46 188.0 104 87.5
COL.COLO4_05022 Corchorus olitorius HOM05D000251 ORTHO05D005532 3.2e-45 184.9 104 84.6
Actinidia11011 Actinidia chinensis HOM05D000251 ORTHO05D005532 3.6e-44 181.4 104 84.6
Duzib132G0720 Durio zibethinus HOM05D000251 ORTHO05D005532 3.6e-44 181.4 104 84.6
Oeu053660.3 Olea europaea HOM05D000251 ORTHO05D005532 3.6e-44 181.4 104 86.5
Thecc.02G183800 Theobroma cacao HOM05D000251 ORTHO05D005532 3.6e-44 181.4 104 84.6
MSTRG.25929 Avicennia marina HOM05D000251 ORTHO05D005532 6.1e-44 180.6 104 86.5
THA.LOC104826038 Tarenaya hassleriana HOM05D000251 ORTHO05D005532 5.2e-43 177.6 104 80.8
Thhalv10003135m.g Eutrema salsugineum HOM05D000251 ORTHO05D005532 1.2e-42 176.4 106 81.1
vmacro09254 Vaccinium macrocarpon HOM05D000251 ORTHO05D005532 1.5e-42 176.0 104 80.8
Sc12g0003170 Simmondsia chinensis HOM05D000251 ORTHO05D005532 2.6e-42 175.3 104 80.8
Atru.chr6.2885 Acer truncatum HOM05D000251 ORTHO05D005532 3.4e-42 174.9 104 81.7
Atru.chr6.2947 Acer truncatum HOM05D000251 ORTHO05D005532 3.4e-42 174.9 104 81.7
AL8G15780 Arabidopsis lyrata HOM05D000251 ORTHO05D005532 3.4e-42 174.9 106 80.2
Cfa004459 Carpinus fangiana HOM05D000251 ORTHO05D005532 3.4e-42 174.9 104 82.7
AT5G44240 Arabidopsis thaliana HOM05D000251 ORTHO05D005532 5.7e-42 174.1 106 79.2
Migut.A00166 Erythranthe guttata HOM05D000251 ORTHO05D005532 5.7e-42 174.1 105 81.9
Rhsim04G0070600 Rhododendron simsii HOM05D000251 ORTHO05D005532 7.5e-42 173.7 104 81.7
MD17G1235400 Malus domestica HOM05D000251 ORTHO05D005532 9.8e-42 173.3 105 79.0
Carub.0008s0428 Capsella rubella HOM05D000251 ORTHO05D005532 1.3e-41 172.9 106 79.2
CARHR178990 Cardamine hirsuta HOM05D000251 ORTHO05D005532 1.3e-41 172.9 106 80.2
Cpa.g.sc83.76 Carica papaya HOM05D000251 ORTHO05D005532 1.3e-41 172.9 104 79.8
Haze_13212 Corylus avellana HOM05D000251 ORTHO05D005532 1.3e-41 172.9 104 81.7
Sabra17G0010900 Salix brachista HOM05D000251 ORTHO05D005532 1.3e-41 172.9 104 80.8
FvH4_5g29681 Fragaria vesca HOM05D000251 ORTHO05D005532 2.8e-41 171.8 105 78.1
FAN04G0170 Fragaria x ananassa HOM05D000251 ORTHO05D005532 2.8e-41 171.8 105 78.1
MD09G1243400 Malus domestica HOM05D000251 ORTHO05D005532 2.8e-41 171.8 105 78.1
Potri.017G013500 Populus trichocarpa HOM05D000251 ORTHO05D005532 2.8e-41 171.8 105 81.9
PGR142G3105 Punica granatum HOM05D000251 ORTHO05D005532 3.7e-41 171.4 104 76.9
Sp2g09050 Schrenkiella parvula HOM05D000251 ORTHO05D005532 3.7e-41 171.4 106 79.2
FAN08G1506 Fragaria x ananassa HOM05D000251 ORTHO05D005532 4.9e-41 171.0 105 78.1
Glyma.13G295100 Glycine max HOM05D000251 ORTHO05D005532 4.9e-41 171.0 105 80.0
Glyma.19G138500 Glycine max HOM05D000251 ORTHO05D005532 4.9e-41 171.0 105 80.0
EL10Ac2g03351 Beta vulgaris HOM05D000251 ORTHO05D005532 6.3e-41 170.6 104 76.0
Glyma.12G205800 Glycine max HOM05D000251 ORTHO05D005532 8.3e-41 170.2 106 79.2
Gohir.A12G139000 Gossypium hirsutum HOM05D000251 ORTHO05D005532 8.3e-41 170.2 105 80.0
Aa31LG5G3020 Aethionema arabicum HOM05D000251 ORTHO05D005532 2.4e-40 168.7 104 76.9
Eucgr.K01048 Eucalyptus grandis HOM05D000251 ORTHO05D005532 2.4e-40 168.7 104 76.9
Gohir.D12G143400 Gossypium hirsutum HOM05D000251 ORTHO05D005532 2.4e-40 168.7 105 79.0
Gorai.008G154700 Gossypium raimondii HOM05D000251 ORTHO05D005532 2.4e-40 168.7 105 79.0
GSVIVG01020583001 Vitis vinifera HOM05D000251 ORTHO05D005532 3.1e-40 168.3 104 77.9
Ah.16g106630 Amaranthus hybridus HOM05D000251 ORTHO05D005532 4.1e-40 167.9 104 76.0
CANSAT64G2637 Cannabis sativa HOM05D000251 ORTHO05D005532 7.0e-40 167.2 106 79.2
Actinidia30461 Actinidia chinensis HOM05D000251 ORTHO05D005532 9.2e-40 166.8 104 78.8
Ciclev10014095m.g Citrus clementina HOM05D000251 ORTHO05D005532 9.2e-40 166.8 104 77.9
Haze_13211 Corylus avellana HOM05D000251 ORTHO05D005532 9.2e-40 166.8 101 82.2
Manes.13G143600 Manihot esculenta HOM05D000251 ORTHO05D005532 1.2e-39 166.4 105 81.0
Lj3g0007891 Lotus japonicus HOM05D000251 ORTHO05D005532 1.6e-39 166.0 106 78.3
BcaC03g16645 Brassica carinata HOM05D000251 ORTHO05D005532 2.0e-39 165.6 106 74.5
C02p44780 Brassica napus HOM05D000251 ORTHO05D005532 2.0e-39 165.6 106 74.5
BolC2t10522H Brassica oleracea HOM05D000251 ORTHO05D005532 2.0e-39 165.6 106 74.5
RcHm_v2.0_Chr7g0223111 Rosa chinensis HOM05D000251 ORTHO05D005532 2.0e-39 165.6 102 78.4
CiPaw.04G127700 Carya illinoinensis HOM05D000251 ORTHO05D005532 2.7e-39 165.2 104 78.8
Hund12502 Selenicereus undatus HOM05D000251 ORTHO05D005532 3.5e-39 164.9 104 76.0
Medtr2g090610 Medicago truncatula HOM05D000251 ORTHO05D005532 4.5e-39 164.5 106 74.5
TPR.G6498 Trifolium pratense HOM05D000251 ORTHO05D005532 4.5e-39 164.5 106 75.5
Ca_09441_v3 Cicer arietinum L. HOM05D000251 ORTHO05D005532 5.9e-39 164.1 104 76.0
C02p44810 Brassica napus HOM05D000251 ORTHO05D005532 7.8e-39 163.7 106 73.6
TAR627G0503 Trochodendron aralioides HOM05D000251 ORTHO05D005532 1.0e-38 163.3 105 78.1
MBI15_g37780_MAGBIO Magnolia biondii HOM05D000251 ORTHO05D005532 1.3e-38 162.9 104 73.1
QL08p039799 Quercus lobata HOM05D000251 ORTHO05D005532 2.3e-38 162.2 102 81.4
Phvul.005G101400 Phaseolus vulgaris HOM05D000251 ORTHO05D005532 3.8e-38 161.4 101 80.2
VMungo1080G0767 Vigna mungo HOM05D000251 ORTHO05D005532 8.6e-38 160.2 101 80.2
BcaC06g34580 Brassica carinata HOM05D000251 ORTHO05D005532 1.9e-37 159.1 106 75.5
A06p47370 Brassica napus HOM05D000251 ORTHO05D005532 1.9e-37 159.1 106 75.5
BolC7t43218H Brassica oleracea HOM05D000251 ORTHO05D005532 1.9e-37 159.1 106 75.5
BraA06t27607Z Brassica rapa HOM05D000251 ORTHO05D005532 1.9e-37 159.1 106 75.5
SalBow7G3451 Salvia bowleyana HOM05D000251 ORTHO05D005532 1.9e-37 159.1 101 81.2
HanXRQChr03g0078711 Helianthus annuus HOM05D000251 ORTHO05D005532 3.3e-37 158.3 104 82.7
AUR62042419 Chenopodium quinoa HOM05D000251 ORTHO05D005532 5.6e-37 157.5 103 71.8
C07p26900 Brassica napus HOM05D000251 ORTHO05D005532 7.3e-37 157.1 106 74.5
BcaB07g30538 Brassica carinata HOM05D000251 ORTHO05D005532 6.1e-36 154.1 110 74.5
Lsat_1_v5_gn_5_44941 Lactuca sativa HOM05D000251 ORTHO05D005532 3.0e-35 151.8 108 76.9
arahy.Tifrunner.gnm1.ann1.28NLID Arachis hypogaea HOM05D000251 ORTHO05D005532 6.8e-35 150.6 106 75.5
Aqoxy4G02325 Aquilegia oxysepala HOM05D000251 ORTHO05D005532 8.9e-35 150.2 105 73.3
Lalb_Chr14g0367081 Lupinus albus HOM05D000251 ORTHO05D005532 2.0e-34 149.1 94 77.7
PSO541G3054 Papaver somniferum HOM05D000251 ORTHO05D005532 2.0e-34 149.1 111 72.1
PSO675G3162 Papaver somniferum HOM05D000251 ORTHO05D005532 2.0e-34 149.1 111 72.1
CSS0015858 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 5.4e-32 141.0 104 72.1
Lalb_Chr24g0399961 Lupinus albus HOM05D000251 ORTHO05D005532 9.2e-32 140.2 101 72.3
AUR62032107 Chenopodium quinoa HOM05D000251 ORTHO05D005532 2.0e-31 139.0 95 69.5
DCAR_000770 Daucus carota HOM05D000251 ORTHO05D005532 2.7e-31 138.7 104 71.2
ClCG07G002540 Citrullus lanatus HOM05D000251 ORTHO05D005532 7.8e-31 137.1 97 70.1
Nn7g36698 Nelumbo nucifera HOM05D000251 ORTHO05D005532 7.8e-31 137.1 103 73.8
Hund20061 Selenicereus undatus HOM05D000251 ORTHO05D005532 1.3e-30 136.3 81 79.0
CSS0026318 Camellia sinensis var. sinensis HOM05D000251 ORTHO05D005532 1.7e-30 136.0 104 69.2
arahy.Tifrunner.gnm1.ann1.97SJFR Arachis hypogaea HOM05D000251 ORTHO05D005532 3.9e-30 134.8 106 70.8
CsaV3_7G005820 Cucumis sativus L. HOM05D000251 ORTHO05D005532 3.9e-30 134.8 102 68.6
DCAR_004456 Daucus carota HOM05D000251 ORTHO05D005532 6.6e-30 134.0 78 87.2
Dinv04806 Davidia involucrata HOM05D000251 ORTHO05D005532 8.6e-30 133.7 80 85.0
unitig_32.g11477 Utricularia gibba HOM05D000251 ORTHO05D005532 1.5e-29 132.9 108 61.1
ATR0697G110 Amborella trichopoda HOM05D000251 ORTHO05D005532 1.9e-29 132.5 104 67.3
MELO3C018710.2 Cucumis melo HOM05D000251 ORTHO05D005532 1.9e-29 132.5 102 67.6
Sed0000387 Sechium edule HOM05D000251 ORTHO05D005532 2.9e-25 118.6 100 64.0
Sed0009923 Sechium edule HOM05D000251 ORTHO05D005532 2.4e-24 115.5 98 63.3
Hma1.2p1_1917F.1_g307480 Hydrangea macrophylla HOM05D000251 ORTHO05D005532 3.5e-23 111.7 89 73.0
Zm00001eb326010 Zea mays HOM05D000251 ORTHO05D005532 3.9e-22 108.2 104 57.7
Os11g0446500 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D005532 1.1e-21 106.7 106 58.5
ECA240G1856 Erigeron canadensis HOM05D000251 ORTHO05D005532 1.2e-20 103.2 59 86.4
Mapoly0005s0144 Marchantia polymorpha HOM05D000251 ORTHO05D005532 4.0e-11 71.6 93 44.1
Os04g0353000 Oryza sativa ssp. japonica HOM05D000251 ORTHO05D005532 5.4e-08 61.2 71 45.1
Zm00001eb420520 Zea mays HOM05D000251 ORTHO05D005532 1.3e-06 56.6 78 41.0
AagrBONN_evm.TU.Sc2ySwM_117.621 Anthoceros agrestis HOM05D000251 ORTHO05D005532 8.6e-06 53.9 97 38.1


User provided reference genes

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