Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 5.8e-61 237.3 112 100.0
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 1.1e-40 169.9 102 75.5
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 9.7e-40 166.8 102 74.5
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 2.8e-39 165.2 102 72.5
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 3.1e-38 161.8 102 71.6
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 1.2e-37 159.8 102 69.6
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 1.3e-36 156.4 96 75.0
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 2.9e-36 155.2 102 68.6
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 5.5e-35 151.0 102 63.7
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 9.4e-35 150.2 102 64.7
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 2.1e-34 149.1 102 63.7
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 2.1e-34 149.1 102 63.7
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 2.1e-34 149.1 102 63.7
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 2.1e-34 149.1 102 65.7
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 2.7e-34 148.7 102 63.7
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 6.1e-34 147.5 102 62.7
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 7.9e-34 147.1 102 61.8
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 7.9e-34 147.1 102 62.7
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 1.4e-33 146.4 102 64.7
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 1.4e-33 146.4 102 64.7
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 5.1e-33 144.4 102 60.8
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 5.1e-33 144.4 102 62.7
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 6.7e-33 144.1 102 61.8
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 8.8e-33 143.7 104 60.6
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 8.8e-33 143.7 102 60.8
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 1.1e-32 143.3 102 60.8
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 2.0e-32 142.5 102 61.8
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 2.0e-32 142.5 102 62.7
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 2.0e-32 142.5 104 58.7
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 2.6e-32 142.1 102 60.8
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 2.6e-32 142.1 102 62.7
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 3.3e-32 141.7 102 60.8
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 3.3e-32 141.7 102 60.8
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 3.3e-32 141.7 102 59.8
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 4.4e-32 141.4 102 62.7
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 4.4e-32 141.4 102 59.8
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 4.4e-32 141.4 102 57.8
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 4.4e-32 141.4 102 62.7
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 5.7e-32 141.0 102 58.8
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 7.4e-32 140.6 102 60.8
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 7.4e-32 140.6 102 59.8
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 7.4e-32 140.6 102 61.8
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 9.7e-32 140.2 102 59.8
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 9.7e-32 140.2 102 59.8
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 9.7e-32 140.2 102 60.8
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 2.2e-31 139.0 102 59.8
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 2.8e-31 138.7 102 59.8
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 2.8e-31 138.7 102 59.8
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 3.7e-31 138.3 102 59.8
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 3.7e-31 138.3 102 57.8
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 3.7e-31 138.3 102 60.8
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 4.8e-31 137.9 102 58.8
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 4.8e-31 137.9 102 59.8
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 4.8e-31 137.9 102 58.8
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 4.8e-31 137.9 102 58.8
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 4.8e-31 137.9 102 57.8
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 4.8e-31 137.9 102 61.8
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 6.3e-31 137.5 102 57.8
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 6.3e-31 137.5 102 58.8
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.1e-30 136.7 102 58.8
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 1.1e-30 136.7 102 58.8
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 1.4e-30 136.3 102 57.8
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 1.8e-30 136.0 102 59.8
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 2.4e-30 135.6 102 56.9
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 3.1e-30 135.2 102 57.8
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 3.1e-30 135.2 102 56.9
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 3.1e-30 135.2 102 58.8
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 3.1e-30 135.2 102 60.8
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 5.3e-30 134.4 102 55.9
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 6.9e-30 134.0 102 57.8
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 9.1e-30 133.7 102 57.8
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 1.5e-29 132.9 102 59.8
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 3.4e-29 131.7 102 55.9
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 7.7e-29 130.6 102 53.9
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 1.0e-28 130.2 102 56.9
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 6.5e-28 127.5 104 53.8
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.1e-27 126.7 102 54.9
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 1.4e-27 126.3 102 54.9
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 3.2e-27 125.2 102 53.9
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 4.2e-27 124.8 102 54.9
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 1.6e-26 122.9 102 54.9
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 2.7e-26 122.1 102 52.0
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 2.7e-26 122.1 100 52.0
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 3.6e-26 121.7 145 42.8
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 5.7e-24 114.4 80 60.0
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 5.7e-24 114.4 103 50.5
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 9.7e-24 113.6 103 48.5
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 9.7e-24 113.6 103 48.5
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 1.7e-23 112.8 102 48.0
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.7e-23 112.8 103 49.5
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 2.8e-23 112.1 103 48.5
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 2.8e-23 112.1 103 48.5
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 2.8e-23 112.1 103 48.5
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 3.7e-23 111.7 103 48.5
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 8.2e-23 110.5 103 48.5
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 1.1e-22 110.2 103 48.5
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 1.4e-22 109.8 102 46.1
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 4.1e-22 108.2 103 46.6
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 4.1e-22 108.2 102 46.1
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 1.2e-21 106.7 103 45.6
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 2.2e-20 102.4 125 44.8
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 2.9e-20 102.1 102 48.0
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 6.5e-20 100.9 196 32.7
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 1.9e-19 99.4 108 44.4
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 2.1e-18 95.9 107 45.8
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 2.7e-18 95.5 104 44.2
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 1.0e-17 93.6 102 43.1
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 3.0e-17 92.0 98 43.9
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 1.2e-16 90.1 102 43.1
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 5.7e-16 87.8 69 59.4
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 1.3e-15 86.7 53 67.9
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 1.1e-14 83.6 69 50.7
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 1.4e-14 83.2 72 54.2
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 4.1e-14 81.6 53 64.2
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 5.3e-14 81.3 102 38.2
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 1.0e-12 77.0 105 41.9
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 2.7e-10 68.9 39 71.8
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 1.3e-07 60.1 48 58.3
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 1.7e-07 59.7 48 58.3
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 6.3e-07 57.8 34 61.8
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 1.8e-06 56.2 36 61.1
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 9.1e-06 53.9 42 54.8


User provided reference genes

Program Settings