Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G37.2 Capsicum annuum HOM05D005786 ORTHO05D006946 4.6e-169 597.8 306 100.0
Sopen04g017810 Solanum pennellii HOM05D005786 ORTHO05D006946 3.5e-140 501.9 306 86.6
Nitab4.5_0003825g0070 Nicotiana tabacum HOM05D005786 ORTHO05D006946 7.0e-133 477.6 306 84.0
Nitab4.5_0000248g0060 Nicotiana tabacum HOM05D005786 ORTHO05D006946 5.8e-119 431.4 306 77.8
Peaxi162Scf01053g00210 Petunia axillaris HOM05D005786 ORTHO05D006946 8.6e-115 417.5 307 77.2
Oeu034777.1 Olea europaea HOM05D005786 ORTHO05D006946 1.5e-106 390.2 296 71.3
GSVIVG01019061001 Vitis vinifera HOM05D005786 ORTHO05D006946 1.2e-105 387.1 311 67.5
Migut.F01861 Erythranthe guttata HOM05D005786 ORTHO05D006946 1.5e-103 380.2 298 69.1
Duzib235G1473 Durio zibethinus HOM05D005786 ORTHO05D006946 2.6e-103 379.4 304 68.1
Thecc.05G189200 Theobroma cacao HOM05D005786 ORTHO05D006946 1.3e-102 377.1 306 65.7
Actinidia06794 Actinidia chinensis HOM05D005786 ORTHO05D006946 2.9e-102 375.9 311 68.2
Gorai.002G056000 Gossypium raimondii HOM05D005786 ORTHO05D006946 4.9e-102 375.2 307 66.8
Gohir.A02G112711 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.4e-101 373.6 304 67.1
Gohir.D03G060604 Gossypium hirsutum HOM05D005786 ORTHO05D006946 1.9e-101 373.2 306 66.7
Nn7g37593 Nelumbo nucifera HOM05D005786 ORTHO05D006946 5.4e-101 371.7 299 68.2
Prupe.6G363100 Prunus persica HOM05D005786 ORTHO05D006946 7.1e-101 371.3 310 65.2
TPR.G33911 Trifolium pratense HOM05D005786 ORTHO05D006946 3.5e-100 369.0 296 68.2
MD04G1246900 Malus domestica HOM05D005786 ORTHO05D006946 4.6e-100 368.6 305 66.9
Potri.019G055100 Populus trichocarpa HOM05D005786 ORTHO05D006946 6.0e-100 368.2 304 66.1
BcaB05g24100 Brassica carinata HOM05D005786 ORTHO05D006946 1.3e-99 367.1 297 66.7
CSS0002276 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.3e-99 367.1 310 66.5
Medtr7g080350 Medicago truncatula HOM05D005786 ORTHO05D006946 1.3e-99 367.1 306 66.7
Ciclev10012322m.g Citrus clementina HOM05D005786 ORTHO05D006946 2.3e-99 366.3 296 66.6
THA.LOC104823809 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 2.3e-99 366.3 279 68.5
Cc09_g03910 Coffea canephora HOM05D005786 ORTHO05D006946 3.9e-99 365.5 312 66.0
Ca_08003_v3 Cicer arietinum L. HOM05D005786 ORTHO05D006946 6.6e-99 364.8 305 65.9
Manes.13G003500 Manihot esculenta HOM05D005786 ORTHO05D006946 2.5e-98 362.8 297 66.7
Dinv29083 Davidia involucrata HOM05D005786 ORTHO05D006946 4.3e-98 362.1 307 67.4
MD12G1263300 Malus domestica HOM05D005786 ORTHO05D006946 4.3e-98 362.1 305 65.9
FvH4_6g00240 Fragaria vesca HOM05D005786 ORTHO05D006946 5.6e-98 361.7 305 65.6
PGR031G0068 Punica granatum HOM05D005786 ORTHO05D006946 5.6e-98 361.7 296 67.6
TAR633G0414 Trochodendron aralioides HOM05D005786 ORTHO05D006946 5.6e-98 361.7 295 67.5
SalBow6G2392 Salvia bowleyana HOM05D005786 ORTHO05D006946 9.5e-98 360.9 294 65.0
Carub.0002s1084 Capsella rubella HOM05D005786 ORTHO05D006946 1.2e-97 360.5 290 66.9
Dinv15702 Davidia involucrata HOM05D005786 ORTHO05D006946 1.2e-97 360.5 310 65.5
Aa31LG2G2390 Aethionema arabicum HOM05D005786 ORTHO05D006946 2.8e-97 359.4 283 65.4
MSTRG.335 Avicennia marina HOM05D005786 ORTHO05D006946 2.8e-97 359.4 311 64.3
C04p43640 Brassica napus HOM05D005786 ORTHO05D006946 2.8e-97 359.4 300 65.7
Thhalv10018947m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 4.7e-97 358.6 290 66.9
RcHm_v2.0_Chr3g0447611 Rosa chinensis HOM05D005786 ORTHO05D006946 6.2e-97 358.2 304 65.8
Sc16g0010480 Simmondsia chinensis HOM05D005786 ORTHO05D006946 6.2e-97 358.2 313 63.6
THA.LOC104805701 Tarenaya hassleriana HOM05D005786 ORTHO05D006946 6.2e-97 358.2 302 66.2
Cfa006249 Carpinus fangiana HOM05D005786 ORTHO05D006946 8.1e-97 357.8 306 64.4
CiPaw.07G082100 Carya illinoinensis HOM05D005786 ORTHO05D006946 8.1e-97 357.8 301 64.8
AT1G65270 Arabidopsis thaliana HOM05D005786 ORTHO05D006946 1.1e-96 357.5 280 66.4
BcaB06g27020 Brassica carinata HOM05D005786 ORTHO05D006946 1.4e-96 357.1 300 65.3
BcaC02g09515 Brassica carinata HOM05D005786 ORTHO05D006946 3.1e-96 355.9 300 65.0
BraA02t06369Z Brassica rapa HOM05D005786 ORTHO05D006946 4.0e-96 355.5 300 66.3
AL2G20300 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 5.2e-96 355.1 291 64.6
arahy.Tifrunner.gnm1.ann1.K5KE50 Arachis hypogaea HOM05D005786 ORTHO05D006946 6.8e-96 354.8 299 65.2
BraA04t16680Z Brassica rapa HOM05D005786 ORTHO05D006946 1.5e-95 353.6 297 65.3
arahy.Tifrunner.gnm1.ann1.BC747V Arachis hypogaea HOM05D005786 ORTHO05D006946 2.6e-95 352.8 300 64.3
A04p10160 Brassica napus HOM05D005786 ORTHO05D006946 2.6e-95 352.8 279 66.3
Phvul.008G052600 Phaseolus vulgaris HOM05D005786 ORTHO05D006946 2.6e-95 352.8 302 64.9
CARHR056920 Cardamine hirsuta HOM05D005786 ORTHO05D006946 4.4e-95 352.1 301 63.5
Lj1A579T43 Lonicera japonica HOM05D005786 ORTHO05D006946 4.4e-95 352.1 361 57.1
Lalb_Chr03g0038061 Lupinus albus HOM05D005786 ORTHO05D006946 1.3e-94 350.5 316 62.3
PSO210G0333 Papaver somniferum HOM05D005786 ORTHO05D006946 1.7e-94 350.1 295 66.1
Glyma.18G244000 Glycine max HOM05D005786 ORTHO05D006946 2.2e-94 349.7 283 66.4
PSO832G0344 Papaver somniferum HOM05D005786 ORTHO05D006946 2.2e-94 349.7 295 65.4
Sp7g05900 Schrenkiella parvula HOM05D005786 ORTHO05D006946 2.9e-94 349.4 296 64.9
TWI18G0853 Tripterygium wilfordii HOM05D005786 ORTHO05D006946 2.9e-94 349.4 288 65.3
Sp5g19940 Schrenkiella parvula HOM05D005786 ORTHO05D006946 3.8e-94 349.0 301 64.1
CANSAT54G1960 Cannabis sativa HOM05D005786 ORTHO05D006946 6.4e-94 348.2 305 65.2
Thhalv10004459m.g Eutrema salsugineum HOM05D005786 ORTHO05D006946 6.4e-94 348.2 297 64.6
VMungo1383G2134 Vigna mungo HOM05D005786 ORTHO05D006946 1.1e-93 347.4 297 63.6
A02p13150 Brassica napus HOM05D005786 ORTHO05D006946 1.9e-93 346.7 298 65.1
ECA232G2695 Erigeron canadensis HOM05D005786 ORTHO05D006946 5.4e-93 345.1 295 65.8
Sabra19G0064300 Salix brachista HOM05D005786 ORTHO05D006946 1.6e-92 343.6 333 59.5
HanXRQChr04g0101081 Helianthus annuus HOM05D005786 ORTHO05D006946 2.7e-92 342.8 303 64.7
Glyma.09G248700 Glycine max HOM05D005786 ORTHO05D006946 7.8e-92 341.3 281 64.8
Hund07363 Selenicereus undatus HOM05D005786 ORTHO05D006946 7.8e-92 341.3 324 59.0
Atru.chr12.1725 Acer truncatum HOM05D005786 ORTHO05D006946 1.0e-91 340.9 282 66.0
C02p21270 Brassica napus HOM05D005786 ORTHO05D006946 2.3e-91 339.7 310 62.6
Aqoxy5G04319 Aquilegia oxysepala HOM05D005786 ORTHO05D006946 3.9e-91 339.0 291 63.2
Lj1g0012134 Lotus japonicus HOM05D005786 ORTHO05D006946 1.9e-90 336.7 306 62.1
FAN05G2398 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.5e-90 336.3 322 60.2
Sed0025282 Sechium edule HOM05D005786 ORTHO05D006946 2.5e-90 336.3 299 63.2
FAN09G1835 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.1e-89 333.2 322 59.6
CsaV3_1G044270 Cucumis sativus L. HOM05D005786 ORTHO05D006946 2.8e-89 332.8 302 61.6
Lsat_1_v5_gn_0_14820 Lactuca sativa HOM05D005786 ORTHO05D006946 2.8e-89 332.8 319 62.1
MELO3C010021.2 Cucumis melo HOM05D005786 ORTHO05D006946 1.8e-88 330.1 302 61.6
DCAR_030004 Daucus carota HOM05D005786 ORTHO05D006946 5.8e-87 325.1 283 62.2
MBI07_g02892_MAGBIO Magnolia biondii HOM05D005786 ORTHO05D006946 5.8e-87 325.1 273 64.1
Solyc04g047720.4 Solanum lycopersicum HOM05D005786 ORTHO05D006946 2.9e-86 322.8 205 82.9
EL10Ac4g10004 Beta vulgaris HOM05D005786 ORTHO05D006946 8.4e-86 321.2 311 58.8
HPP92_023718 Vanilla planifolia HOM05D005786 ORTHO05D006946 8.4e-86 321.2 297 59.6
CDE04G1735 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 1.1e-85 320.9 301 60.8
ATR0743G231 Amborella trichopoda HOM05D005786 ORTHO05D006946 3.2e-85 319.3 300 60.3
SGA_v2.0_scaffold340G49308 Striga asiatica HOM05D005786 ORTHO05D006946 5.4e-85 318.5 297 62.0
FAN14G0011 Fragaria x ananassa HOM05D005786 ORTHO05D006946 1.9e-82 310.1 332 55.7
CDE07G0365 Ceratophyllum demersum HOM05D005786 ORTHO05D006946 5.6e-82 308.5 301 59.5
Lsat_1_v5_gn_2_63981 Lactuca sativa HOM05D005786 ORTHO05D006946 1.8e-80 303.5 296 59.1
AUR62006638 Chenopodium quinoa HOM05D005786 ORTHO05D006946 1.2e-79 300.8 322 56.5
CSS0048270 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.9e-77 293.5 240 66.7
SEGI_32803 Sequoiadendron giganteum HOM05D005786 ORTHO05D006946 3.0e-75 286.2 310 53.9
unitig_0.g385 Utricularia gibba HOM05D005786 ORTHO05D006946 3.4e-71 272.7 301 52.8
Zm00001eb168750 Zea mays HOM05D005786 ORTHO05D006946 3.4e-71 272.7 298 52.7
Os11g0264600 Oryza sativa ssp. japonica HOM05D005786 ORTHO05D006946 1.0e-70 271.2 234 63.2
CARHR216460 Cardamine hirsuta HOM05D005786 ORTHO05D006946 9.3e-69 264.6 199 67.3
Psat3g102080 Pisum sativum HOM05D005786 ORTHO05D006946 5.8e-63 245.4 198 68.2
Actinidia03265 Actinidia chinensis HOM05D005786 ORTHO05D006946 3.8e-62 242.7 184 68.5
SMO203G0033 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 1.8e-56 223.8 315 46.3
Eucgr.H01412 Eucalyptus grandis HOM05D005786 ORTHO05D006946 1.2e-52 211.1 147 70.7
Mapoly0069s0067 Marchantia polymorpha HOM05D005786 ORTHO05D006946 8.8e-51 204.9 276 42.0
vmacro19569 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 4.3e-50 202.6 191 62.8
BcaC03g14691 Brassica carinata HOM05D005786 ORTHO05D006946 6.3e-49 198.7 261 49.8
QL01p048186 Quercus lobata HOM05D005786 ORTHO05D006946 1.4e-48 197.6 177 63.8
Cpa.g.sc123.39 Carica papaya HOM05D005786 ORTHO05D006946 8.5e-46 188.3 237 49.8
AagrBONN_evm.TU.Sc2ySwM_117.2462 Anthoceros agrestis HOM05D005786 ORTHO05D006946 3.6e-44 183.0 278 38.5
Pp3c3_22280 Physcomitrium patens HOM05D005786 ORTHO05D006946 1.4e-43 181.0 306 37.6
AagrBONN_evm.TU.Sc2ySwM_368.936 Anthoceros agrestis HOM05D005786 ORTHO05D006946 3.9e-43 179.5 296 37.8
CSS0025324 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 2.0e-42 177.2 157 65.6
SMO357G0021 Selaginella moellendorffii HOM05D005786 ORTHO05D006946 2.6e-42 176.8 298 40.9
Haze_04585 Corylus avellana HOM05D005786 ORTHO05D006946 5.7e-42 175.6 166 60.8
FAN02G1732 Fragaria x ananassa HOM05D005786 ORTHO05D006946 2.0e-39 167.2 155 61.3
Haze_04584 Corylus avellana HOM05D005786 ORTHO05D006946 1.1e-37 161.4 130 66.9
CSS0033529 Camellia sinensis var. sinensis HOM05D005786 ORTHO05D006946 1.5e-37 161.0 159 60.4
ClCG03G010290 Citrullus lanatus HOM05D005786 ORTHO05D006946 3.8e-30 136.3 136 57.4
Medtr3g103380 Medicago truncatula HOM05D005786 ORTHO05D006946 7.2e-29 132.1 89 69.7
vmacro19570 Vaccinium macrocarpon HOM05D005786 ORTHO05D006946 4.7e-28 129.4 106 67.9
Cpa.g.sc123.40 Carica papaya HOM05D005786 ORTHO05D006946 6.1e-28 129.0 106 67.9
ClCG03G010310 Citrullus lanatus HOM05D005786 ORTHO05D006946 3.5e-23 113.2 120 56.7
CBR_g36458 Chara braunii HOM05D005786 ORTHO05D006946 8.5e-22 108.6 293 33.8
AL2G20340 Arabidopsis lyrata HOM05D005786 ORTHO05D006946 1.2e-20 104.8 84 70.2
CARHR216470 Cardamine hirsuta HOM05D005786 ORTHO05D006946 9.8e-18 95.1 113 56.6
Oeu040717.1 Olea europaea HOM05D005786 ORTHO05D006946 1.7e-17 94.4 97 58.8
BcaB04g17978 Brassica carinata HOM05D005786 ORTHO05D006946 4.1e-16 89.7 142 45.1
Eucgr.H01411 Eucalyptus grandis HOM05D005786 ORTHO05D006946 4.1e-16 89.7 80 61.2
Ah.04g159110 Amaranthus hybridus HOM05D005786 ORTHO05D006946 9.1e-16 88.6 115 47.8
MCO14G575 Micromonas commoda HOM05D005786 ORTHO05D006946 3.8e-14 83.2 302 27.2
BolC2t08267H Brassica oleracea HOM05D005786 ORTHO05D006946 9.5e-13 78.6 89 56.2
PRCOL_00005036 Prasinoderma coloniale HOM05D005786 ORTHO05D006946 2.2e-09 67.4 169 29.6


User provided reference genes

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