Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G3648.1 Capsicum annuum HOM05D004936 ORTHO05D005977 4.9e-77 291.2 161 100.0
CAN.G689.18 Capsicum annuum HOM05D004936 ORTHO05D005977 4.9e-77 291.2 161 100.0
Solyc11g068980.2 Solanum lycopersicum HOM05D004936 ORTHO05D005977 2.2e-61 239.2 141 95.7
Sopen11g027690 Solanum pennellii HOM05D004936 ORTHO05D005977 2.2e-61 239.2 141 95.7
PGSC0003DMG402019636 Solanum tuberosum HOM05D004936 ORTHO05D005977 2.4e-60 235.7 141 93.6
Nitab4.5_0000158g0090 Nicotiana tabacum HOM05D004936 ORTHO05D005977 3.9e-58 228.4 141 91.5
Nitab4.5_0002493g0030 Nicotiana tabacum HOM05D004936 ORTHO05D005977 8.7e-58 227.3 141 90.8
Nitab4.5_0000570g0350 Nicotiana tabacum HOM05D004936 ORTHO05D005977 1.5e-57 226.5 141 90.8
Peaxi162Scf00624g00914 Petunia axillaris HOM05D004936 ORTHO05D005977 1.6e-56 223.0 141 88.7
Nitab4.5_0003484g0120 Nicotiana tabacum HOM05D004936 ORTHO05D005977 6.4e-53 211.1 127 92.9
Oeu011630.1 Olea europaea HOM05D004936 ORTHO05D005977 6.7e-50 201.1 145 77.9
Haze_24392 Corylus avellana HOM05D004936 ORTHO05D005977 1.5e-49 199.9 135 83.0
Dinv28681 Davidia involucrata HOM05D004936 ORTHO05D005977 5.6e-49 198.0 135 81.5
Hma1.2p1_0146F.1_g065480 Hydrangea macrophylla HOM05D004936 ORTHO05D005977 5.6e-49 198.0 133 72.2
SGA_v2.0_scaffold39G15257 Striga asiatica HOM05D004936 ORTHO05D005977 7.4e-49 197.6 140 80.0
TAR636G1077 Trochodendron aralioides HOM05D004936 ORTHO05D005977 7.4e-49 197.6 137 73.0
GSVIVG01024670001 Vitis vinifera HOM05D004936 ORTHO05D005977 9.6e-49 197.2 134 74.6
Cfa011755 Carpinus fangiana HOM05D000089 ORTHO05D000104 3.7e-48 195.3 136 80.1
Migut.G00331 Erythranthe guttata HOM05D004936 ORTHO05D005977 3.7e-48 195.3 141 69.5
Psat7g170640 Pisum sativum HOM05D004936 ORTHO05D005977 3.7e-48 195.3 134 82.1
CSS0031896 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 4.8e-48 194.9 142 68.3
CSS0046409 Camellia sinensis var. sinensis HOM05D004936 ORTHO05D005977 4.8e-48 194.9 142 68.3
Phvul.011G019700 Phaseolus vulgaris HOM05D004936 ORTHO05D005977 4.8e-48 194.9 128 83.6
VMungo1127G0545 Vigna mungo HOM05D004936 ORTHO05D005977 4.8e-48 194.9 140 79.3
Lj3g0015200 Lotus japonicus HOM05D004936 ORTHO05D005977 1.1e-47 193.7 133 81.2
MSTRG.4026 Avicennia marina HOM05D004936 ORTHO05D005977 1.4e-47 193.4 140 77.1
CiPaw.13G071600 Carya illinoinensis HOM05D004936 ORTHO05D005977 1.4e-47 193.4 135 76.3
TPR.G39486 Trifolium pratense HOM05D004936 ORTHO05D005977 1.8e-47 193.0 134 82.1
Cc05_g03440 Coffea canephora HOM05D004936 ORTHO05D005977 2.4e-47 192.6 142 78.9
QL01p039898 Quercus lobata HOM05D004936 ORTHO05D005977 4.0e-47 191.8 141 80.1
Manes.03G100200 Manihot esculenta HOM05D004936 ORTHO05D005977 5.3e-47 191.4 138 72.5
SalBow5G1663 Salvia bowleyana HOM05D004936 ORTHO05D005977 9.0e-47 190.7 129 71.3
unitig_736.g22495 Utricularia gibba HOM05D004936 ORTHO05D005977 1.5e-46 189.9 135 68.1
Hund18959 Selenicereus undatus HOM05D004936 ORTHO05D005977 2.0e-46 189.5 124 75.0
Glyma.09G223900 Glycine max HOM05D004936 ORTHO05D005977 2.6e-46 189.1 142 75.4
Glyma.12G017200 Glycine max HOM05D004936 ORTHO05D005977 2.6e-46 189.1 142 75.4
Actinidia23210 Actinidia chinensis HOM05D004936 ORTHO05D005977 3.4e-46 188.7 123 82.9
Ca_18959_v3 Cicer arietinum L. HOM05D000232 ORTHO05D000145 3.4e-46 188.7 139 75.5
Manes.15G096000 Manihot esculenta HOM05D004936 ORTHO05D005977 3.4e-46 188.7 142 69.7
Ciclev10029395m.g Citrus clementina HOM05D004936 ORTHO05D005977 5.8e-46 188.0 140 65.7
Duzib084G0838 Durio zibethinus HOM05D004936 ORTHO05D005977 7.6e-46 187.6 140 74.3
MD03G1061000 Malus domestica HOM05D004936 ORTHO05D005977 9.9e-46 187.2 142 75.4
Cpa.g.sc2.381 Carica papaya HOM05D004936 ORTHO05D005977 2.2e-45 186.0 150 65.3
Medtr2g070380 Medicago truncatula HOM05D004936 ORTHO05D005977 2.2e-45 186.0 128 70.3
ClCG03G000300 Citrullus lanatus HOM05D000089 ORTHO05D000104 2.9e-45 185.7 128 79.7
Medtr4g077950 Medicago truncatula HOM05D004936 ORTHO05D005977 2.9e-45 185.7 143 67.1
Sabra16G0174900 Salix brachista HOM05D004936 ORTHO05D005977 2.9e-45 185.7 139 66.2
Potri.001G281200 Populus trichocarpa HOM05D004936 ORTHO05D005977 3.8e-45 185.3 129 71.3
Sed0012478 Sechium edule HOM05D004936 ORTHO05D005977 3.8e-45 185.3 129 79.8
Prupe.6G051100 Prunus persica HOM05D004936 ORTHO05D005977 4.9e-45 184.9 127 81.1
CANSAT54G2258 Cannabis sativa HOM05D004936 ORTHO05D005977 1.1e-44 183.7 140 72.1
DCAR_027925 Daucus carota HOM05D004936 ORTHO05D005977 1.1e-44 183.7 119 79.8
PSO832G3733 Papaver somniferum HOM05D004936 ORTHO05D005977 1.1e-44 183.7 129 75.2
CDE06G1927 Ceratophyllum demersum HOM05D004936 ORTHO05D005977 1.9e-44 183.0 142 69.0
AL1G30690 Arabidopsis lyrata HOM05D004936 ORTHO05D005977 2.4e-44 182.6 143 65.0
PSO210G4578 Papaver somniferum HOM05D004936 ORTHO05D005977 2.4e-44 182.6 131 74.0
THA.LOC104812175 Tarenaya hassleriana HOM05D004936 ORTHO05D005977 2.4e-44 182.6 120 72.5
Eucgr.K02762 Eucalyptus grandis HOM05D004936 ORTHO05D005977 3.2e-44 182.2 140 65.7
Aqoxy1G01790 Aquilegia oxysepala HOM05D004936 ORTHO05D005977 4.2e-44 181.8 140 66.4
DCAR_018221 Daucus carota HOM05D004936 ORTHO05D005977 4.2e-44 181.8 134 75.4
Thhalv10008922m.g Eutrema salsugineum HOM05D004936 ORTHO05D005977 4.2e-44 181.8 143 65.0
Lalb_Chr03g0024401 Lupinus albus HOM05D004936 ORTHO05D005977 5.5e-44 181.4 134 78.4
Rhsim13G0065400 Rhododendron simsii HOM05D004936 ORTHO05D005977 5.5e-44 181.4 141 67.4
AUR62009688 Chenopodium quinoa HOM05D004936 ORTHO05D005977 7.1e-44 181.0 140 63.6
C08p43440 Brassica napus HOM05D004936 ORTHO05D005977 9.3e-44 180.6 131 69.5
BolC8t51892H Brassica oleracea HOM05D004936 ORTHO05D005977 9.3e-44 180.6 131 69.5
Potri.009G076400 Populus trichocarpa HOM05D004936 ORTHO05D005977 9.3e-44 180.6 144 63.9
RcHm_v2.0_Chr5g0071211 Rosa chinensis HOM05D004936 ORTHO05D005977 9.3e-44 180.6 137 65.7
Sp1g16280 Schrenkiella parvula HOM05D004936 ORTHO05D005977 1.2e-43 180.3 140 65.0
Carub.0001s1794 Capsella rubella HOM05D004936 ORTHO05D005977 1.6e-43 179.9 120 71.7
Zm00001eb013690 Zea mays HOM05D004936 ORTHO05D005977 1.6e-43 179.9 145 66.2
A09p59990 Brassica napus HOM05D004936 ORTHO05D005977 2.1e-43 179.5 131 68.7
BraA09t41369Z Brassica rapa HOM05D004936 ORTHO05D005977 2.1e-43 179.5 131 68.7
HPP92_003695 Vanilla planifolia HOM05D004936 ORTHO05D005977 2.7e-43 179.1 132 77.3
Ah.15g096180 Amaranthus hybridus HOM05D004936 ORTHO05D005977 4.6e-43 178.3 132 65.2
BcaC07g41334 Brassica carinata HOM05D004936 ORTHO05D005977 4.6e-43 178.3 141 65.2
ATR0691G226 Amborella trichopoda HOM05D004936 ORTHO05D005977 6.0e-43 177.9 140 77.1
A08p30450 Brassica napus HOM05D004936 ORTHO05D005977 6.0e-43 177.9 131 67.2
CiPaw.14G055600 Carya illinoinensis HOM05D004936 ORTHO05D005977 6.0e-43 177.9 114 86.8
Gohir.A12G269500 Gossypium hirsutum HOM05D004936 ORTHO05D005977 6.0e-43 177.9 129 65.9
arahy.Tifrunner.gnm1.ann1.K3S5GW Arachis hypogaea HOM05D004936 ORTHO05D005977 7.9e-43 177.6 142 64.1
arahy.Tifrunner.gnm1.ann1.Z0D2FZ Arachis hypogaea HOM05D004936 ORTHO05D005977 7.9e-43 177.6 142 64.1
AUR62001892 Chenopodium quinoa HOM05D004936 ORTHO05D005977 7.9e-43 177.6 140 62.9
Lj2A1091T51 Lonicera japonica HOM05D004936 ORTHO05D005977 7.9e-43 177.6 122 80.3
PGR044G1703 Punica granatum HOM05D004936 ORTHO05D005977 7.9e-43 177.6 140 71.4
Gohir.D12G270000 Gossypium hirsutum HOM05D004936 ORTHO05D005977 1.0e-42 177.2 128 66.4
HanXRQChr14g0439861 Helianthus annuus HOM05D004936 ORTHO05D005977 1.0e-42 177.2 140 62.1
BcaC07g38896 Brassica carinata HOM05D004936 ORTHO05D005977 1.3e-42 176.8 141 63.8
C08p18520 Brassica napus HOM05D004936 ORTHO05D005977 1.3e-42 176.8 141 63.8
BolC8t49484H Brassica oleracea HOM05D004936 ORTHO05D005977 1.3e-42 176.8 141 63.8
Lsat_1_v5_gn_2_60241 Lactuca sativa HOM05D004936 ORTHO05D005977 2.3e-42 176.0 129 66.7
Os03g0296300 Oryza sativa ssp. japonica HOM05D004936 ORTHO05D005977 2.3e-42 176.0 142 66.2
Aa31LG7G2800 Aethionema arabicum HOM05D004936 ORTHO05D005977 3.0e-42 175.6 143 61.5
BraA08t34977Z Brassica rapa HOM05D004936 ORTHO05D005977 3.9e-42 175.3 141 63.1
Gorai.008G290300 Gossypium raimondii HOM05D004936 ORTHO05D005977 3.9e-42 175.3 140 62.9
Thecc.03G057900 Theobroma cacao HOM05D004936 ORTHO05D005977 5.1e-42 174.9 140 72.1
BcaB03g12974 Brassica carinata HOM05D004936 ORTHO05D005977 6.7e-42 174.5 140 62.9
BcaNung05441 Brassica carinata HOM05D004936 ORTHO05D005977 6.7e-42 174.5 140 62.9
CARHR018890 Cardamine hirsuta HOM05D004936 ORTHO05D005977 6.7e-42 174.5 140 61.4
MELO3C020507.2 Cucumis melo HOM05D004936 ORTHO05D005977 6.7e-42 174.5 128 75.0
Duzib068G0913 Durio zibethinus HOM05D004936 ORTHO05D005977 8.7e-42 174.1 146 64.4
COL.COLO4_04994 Corchorus olitorius HOM05D000034 ORTHO05D000037 1.1e-41 173.7 134 63.4
EL10Ac7g15900 Beta vulgaris HOM05D004936 ORTHO05D005977 1.5e-41 173.3 140 62.1
CsaV3_1G036620 Cucumis sativus L. HOM05D004936 ORTHO05D005977 1.5e-41 173.3 128 66.4
Atru.chr3.4141 Acer truncatum HOM05D004936 ORTHO05D005977 1.9e-41 172.9 142 62.7
TWI75G1184 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 9.6e-41 170.6 133 73.7
Lj1A128T43 Lonicera japonica HOM05D004936 ORTHO05D005977 1.3e-40 170.2 130 73.8
FAN16G3562 Fragaria x ananassa HOM05D004936 ORTHO05D005977 1.6e-40 169.9 137 59.9
FvH4_3g39470 Fragaria vesca HOM05D004936 ORTHO05D005977 3.7e-40 168.7 137 59.1
FAN11G2192 Fragaria x ananassa HOM05D004936 ORTHO05D005977 3.7e-40 168.7 137 59.1
FAN21G3073 Fragaria x ananassa HOM05D004936 ORTHO05D005977 3.7e-40 168.7 137 59.1
ECA238G2024 Erigeron canadensis HOM05D004936 ORTHO05D005977 4.8e-40 168.3 137 66.4
vmacro02929 Vaccinium macrocarpon HOM05D004936 ORTHO05D005977 4.8e-40 168.3 187 48.7
COL.COLO4_31393 Corchorus olitorius HOM05D004936 ORTHO05D005977 4.0e-39 165.2 133 59.4
Nn2g10980 Nelumbo nucifera HOM05D004936 ORTHO05D005977 4.0e-39 165.2 135 72.6
TWI79G0082 Tripterygium wilfordii HOM05D004936 ORTHO05D005977 4.0e-39 165.2 133 70.7
Nn5g31489 Nelumbo nucifera HOM05D004936 ORTHO05D005977 9.0e-39 164.1 132 72.7
Nn6g34585 Nelumbo nucifera HOM05D004936 ORTHO05D005977 9.0e-39 164.1 132 72.7
Oeu023392.2 Olea europaea HOM05D004936 ORTHO05D005977 1.7e-37 159.8 142 58.5
FAN25G3861 Fragaria x ananassa HOM05D004936 ORTHO05D005977 2.1e-35 152.9 114 63.2
Sed0020346 Sechium edule HOM05D004936 ORTHO05D005977 3.7e-32 142.1 129 67.4
SMO353G0176 Selaginella moellendorffii HOM05D004936 ORTHO05D005977 8.2e-32 141.0 141 48.9
Mapoly0036s0081 Marchantia polymorpha HOM05D004936 ORTHO05D005977 3.1e-31 139.0 117 58.1
AT3G10110 Arabidopsis thaliana HOM05D004936 ORTHO05D005977 6.9e-31 137.9 117 60.7
Sc12g0000320 Simmondsia chinensis HOM05D004936 ORTHO05D005977 2.0e-30 136.3 76 85.5
MD11G1063700 Malus domestica HOM05D004936 ORTHO05D005977 4.5e-30 135.2 108 63.0
TAR633G2185 Trochodendron aralioides HOM05D004936 ORTHO05D005977 1.0e-29 134.0 109 73.4
TPR.G26511 Trifolium pratense HOM05D004936 ORTHO05D005977 1.1e-28 130.6 96 68.8
Pp3c12_17590 Physcomitrium patens HOM05D004936 ORTHO05D005977 4.6e-27 125.2 117 53.0
CANSAT21G2196 Cannabis sativa HOM05D004936 ORTHO05D005977 1.8e-26 123.2 77 74.0
AagrBONN_evm.TU.Sc2ySwM_344.4538 Anthoceros agrestis HOM05D004936 ORTHO05D005977 5.1e-26 121.7 132 56.8
SEGI_35825 Sequoiadendron giganteum HOM05D004936 ORTHO05D005977 6.3e-24 114.8 76 71.1
Nitab4.5_0001270g0210 Nicotiana tabacum HOM05D004936 ORTHO05D005977 4.1e-23 112.1 132 53.8
Zm00001eb223780 Zea mays HOM05D004936 ORTHO05D005977 1.3e-21 107.1 69 75.4
Zm00001eb130910 Zea mays HOM05D004936 ORTHO05D005977 5.0e-21 105.1 69 73.9
CBR_g19040 Chara braunii HOM05D004936 ORTHO05D005977 9.4e-20 100.9 130 38.5
Dinv09657 Davidia involucrata HOM05D004936 ORTHO05D005977 8.8e-18 94.4 52 82.7
MD11G1064100 Malus domestica HOM05D004936 ORTHO05D005977 6.3e-16 88.2 83 55.4
Dinv09658 Davidia involucrata HOM05D004936 ORTHO05D005977 1.5e-14 83.6 71 76.1
Cre01.g021050 Chlamydomonas reinhardtii HOM05D004936 ORTHO05D005977 1.0e-13 80.9 126 37.3
MCO05G723 Micromonas commoda HOM05D004936 ORTHO05D005977 1.9e-12 76.6 117 35.9
Nn6g32762 Nelumbo nucifera HOM05D004936 ORTHO05D005977 9.4e-12 74.3 38 86.8
TPR.G39290 Trifolium pratense HOM05D004936 ORTHO05D005977 1.2e-11 73.9 43 81.4
PRCOL_00001564 Prasinoderma coloniale HOM05D004936 ORTHO05D005977 1.6e-11 73.6 132 34.1
MD05G1160000 Malus domestica HOM05D004936 ORTHO05D005977 2.0e-09 66.6 40 75.0
MD11G1064200 Malus domestica HOM05D004936 ORTHO05D005977 2.6e-09 66.2 38 78.9
Cfa023961 Carpinus fangiana HOM05D004936 ORTHO05D005977 7.4e-09 64.7 60 46.7
TPR.G21432 Trifolium pratense HOM05D004936 ORTHO05D005977 1.7e-08 63.5 78 44.9
DCAR_027921 Daucus carota HOM05D004936 ORTHO05D005977 1.2e-06 57.4 31 71.0
Medtr2g070300 Medicago truncatula HOM05D004936 ORTHO05D005977 2.0e-06 56.6 29 86.2


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