Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G363.26 Capsicum annuum HOM05D000018 ORTHO05D001920 2.1e-29 131.7 68 100.0
CAN.G363.25 Capsicum annuum HOM05D000018 ORTHO05D001920 3.7e-18 94.4 113 52.2
PGSC0003DMG400014093 Solanum tuberosum HOM05D000018 ORTHO05D001920 9.1e-17 89.7 113 48.7
CAN.G734.3 Capsicum annuum HOM05D000018 ORTHO05D001920 1.6e-16 89.0 113 50.4
Sopen11g008170 Solanum pennellii HOM05D000018 ORTHO05D001920 4.5e-16 87.4 114 47.4
Peaxi162Scf00927g00035 Petunia axillaris HOM05D000018 ORTHO05D001920 5.9e-16 87.0 111 49.5
Nitab4.5_0005357g0020 Nicotiana tabacum HOM05D000018 ORTHO05D001920 1.0e-15 86.3 108 49.1
Solyc11g013110.2 Solanum lycopersicum HOM05D000018 ORTHO05D001920 3.8e-15 84.3 113 46.0
DCAR_017388 Daucus carota HOM05D000018 ORTHO05D001920 8.8e-12 73.2 111 42.3
Dinv01187 Davidia involucrata HOM05D000018 ORTHO05D001920 3.4e-11 71.2 111 42.3
Dinv40373 Davidia involucrata HOM05D000018 ORTHO05D001920 3.4e-11 71.2 111 42.3
Cc10_g11070 Coffea canephora HOM05D000018 ORTHO05D001920 4.4e-11 70.9 111 42.3
Hma1.2p1_1324F.1_g275690 Hydrangea macrophylla HOM05D000018 ORTHO05D001920 9.8e-11 69.7 111 40.5
CSS0045924 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001920 1.1e-09 66.2 113 38.9
Dinv27351 Davidia involucrata HOM05D000018 ORTHO05D001920 1.8e-09 65.5 114 40.4
Dinv27349 Davidia involucrata HOM05D000018 ORTHO05D001920 2.4e-09 65.1 114 40.4
ECA232G3631 Erigeron canadensis HOM05D000018 ORTHO05D001920 2.4e-09 65.1 109 40.4
CSS0007745 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001920 3.1e-09 64.7 112 38.4
CSS0030401 Camellia sinensis var. sinensis HOM05D000018 ORTHO05D001920 7.0e-09 63.5 111 37.8
Lj4C607T9 Lonicera japonica HOM05D000018 ORTHO05D001920 9.1e-09 63.2 111 38.7
MSTRG.28290 Avicennia marina HOM05D000018 ORTHO05D001920 1.2e-08 62.8 111 41.4
Lsat_1_v5_gn_8_117441 Lactuca sativa HOM05D000018 ORTHO05D001920 1.2e-08 62.8 109 39.4
GSVIVG01008914001 Vitis vinifera HOM05D000018 ORTHO05D001920 1.2e-08 62.8 111 39.6
Atru.chr4.1168 Acer truncatum HOM05D000018 ORTHO05D001920 1.6e-08 62.4 110 39.1
Cfa015982 Carpinus fangiana HOM05D000018 ORTHO05D001920 2.7e-08 61.6 110 39.1
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 2.7e-08 61.6 110 38.2
Migut.C01158 Erythranthe guttata HOM05D000018 ORTHO05D001920 3.5e-08 61.2 111 38.7
FvH4_2g26440 Fragaria vesca HOM05D000018 ORTHO05D001920 4.5e-08 60.8 110 37.3
FAN20G0501 Fragaria x ananassa HOM05D000018 ORTHO05D001920 4.5e-08 60.8 110 37.3
FAN24G0060 Fragaria x ananassa HOM05D000018 ORTHO05D001920 4.5e-08 60.8 110 37.3
Duzib116G0623 Durio zibethinus HOM05D000018 ORTHO05D001920 5.9e-08 60.5 110 36.4
FAN27G2689 Fragaria x ananassa HOM05D000018 ORTHO05D001920 5.9e-08 60.5 110 36.4
PSO528G0273 Papaver somniferum HOM05D000018 ORTHO05D001920 5.9e-08 60.5 111 35.1
FAN15G2198 Fragaria x ananassa HOM05D000018 ORTHO05D001920 1.0e-07 59.7 110 36.4
Dinv27348 Davidia involucrata HOM05D000018 ORTHO05D001920 1.3e-07 59.3 110 37.3
Dinv27350 Davidia involucrata HOM05D000018 ORTHO05D001920 1.3e-07 59.3 110 37.3
Glyma.14G163302 Glycine max HOM05D000018 ORTHO05D001920 1.3e-07 59.3 42 76.2
PSO170G1810 Papaver somniferum HOM05D000018 ORTHO05D001920 1.3e-07 59.3 111 34.2
RcHm_v2.0_Chr6g0295121 Rosa chinensis HOM05D000018 ORTHO05D001920 1.3e-07 59.3 110 36.4
Hund16839 Selenicereus undatus HOM05D000018 ORTHO05D001920 1.3e-07 59.3 111 36.0
QL10p039200 Quercus lobata HOM05D000018 ORTHO05D001920 1.7e-07 58.9 110 37.3
QL93p0116_0009 Quercus lobata HOM05D000018 ORTHO05D001920 1.7e-07 58.9 110 37.3
TPR.G8503 Trifolium pratense HOM05D000018 ORTHO05D001920 1.7e-07 58.9 109 37.6
Aqoxy6G00158 Aquilegia oxysepala HOM05D000018 ORTHO05D001920 2.3e-07 58.5 111 36.0
CiPaw.05G226200 Carya illinoinensis HOM05D000018 ORTHO05D001920 2.3e-07 58.5 109 38.5
Ca_26924_v3 Cicer arietinum L. HOM05D000018 ORTHO05D001920 2.3e-07 58.5 109 36.7
Lj7C318T5 Lonicera japonica HOM05D000018 ORTHO05D001920 2.9e-07 58.2 110 35.5
Lj7C331T3 Lonicera japonica HOM05D000018 ORTHO05D001920 2.9e-07 58.2 110 35.5
SalBow7G2908 Salvia bowleyana HOM05D000018 ORTHO05D001920 2.9e-07 58.2 108 39.8
CiPaw.05G225800 Carya illinoinensis HOM05D000018 ORTHO05D001920 5.0e-07 57.4 111 36.9
Medtr5g059130 Medicago truncatula HOM05D000018 ORTHO05D001920 5.0e-07 57.4 109 36.7
VMungo0647G1892 Vigna mungo HOM05D000018 ORTHO05D001920 5.0e-07 57.4 42 73.8
COL.COLO4_38332 Corchorus olitorius HOM05D000018 ORTHO05D001920 6.6e-07 57.0 109 35.8
Phvul.008G166000 Phaseolus vulgaris HOM05D000018 ORTHO05D001920 6.6e-07 57.0 42 71.4
SalBow7G2981 Salvia bowleyana HOM05D000018 ORTHO05D001920 6.6e-07 57.0 108 38.9
CiPaw.03G254100 Carya illinoinensis HOM05D000018 ORTHO05D001920 8.6e-07 56.6 110 34.5
Glyma.13G082300 Glycine max HOM05D000018 ORTHO05D001920 8.6e-07 56.6 42 73.8
Gohir.A05G232900 Gossypium hirsutum HOM05D000018 ORTHO05D001920 8.6e-07 56.6 110 35.5
Thecc.05G189500 Theobroma cacao HOM05D000018 ORTHO05D001920 8.6e-07 56.6 110 34.5
Cpa.g.sc37.77 Carica papaya HOM05D000018 ORTHO05D001920 1.1e-06 56.2 109 34.9
RhsimUnG0134400 Rhododendron simsii HOM05D000018 ORTHO05D001920 1.1e-06 56.2 110 36.4
RhsimUnG0143300 Rhododendron simsii HOM05D000018 ORTHO05D001920 1.1e-06 56.2 110 36.4
Actinidia23061 Actinidia chinensis HOM05D000018 ORTHO05D001920 1.5e-06 55.8 110 34.5
Ciclev10003741m.g Citrus clementina HOM05D000018 ORTHO05D001920 1.5e-06 55.8 110 35.5
Gorai.009G243600 Gossypium raimondii HOM05D000018 ORTHO05D001920 1.5e-06 55.8 110 35.5
Nn5g28145 Nelumbo nucifera HOM05D000018 ORTHO05D001920 1.5e-06 55.8 111 35.1
PSO170G0138 Papaver somniferum HOM05D000018 ORTHO05D001920 1.9e-06 55.5 110 33.6
PSO528G0035 Papaver somniferum HOM05D000018 ORTHO05D001920 1.9e-06 55.5 110 33.6
Actinidia29444 Actinidia chinensis HOM05D000018 ORTHO05D001920 2.5e-06 55.1 42 69.0
Lj1g0005906 Lotus japonicus HOM05D000018 ORTHO05D001920 2.5e-06 55.1 110 35.5
Psat2g079520 Pisum sativum HOM05D000018 ORTHO05D001920 2.5e-06 55.1 42 69.0
SGA_v2.0_scaffold52G18990 Striga asiatica HOM05D000018 ORTHO05D001920 2.5e-06 55.1 111 37.8
MD15G1354100 Malus domestica HOM05D000018 ORTHO05D001920 3.3e-06 54.7 110 34.5
vmacro00811 Vaccinium macrocarpon HOM05D000018 ORTHO05D001920 4.2e-06 54.3 42 66.7
Lalb_Chr17g0343921 Lupinus albus HOM05D000018 ORTHO05D001920 5.5e-06 53.9 42 69.0
Haze_00490 Corylus avellana HOM05D000018 ORTHO05D001920 7.2e-06 53.5 110 37.3
Glyma.06G110600 Glycine max HOM05D000018 ORTHO05D001920 7.2e-06 53.5 109 34.9
Gohir.D05G235300 Gossypium hirsutum HOM05D000018 ORTHO05D001920 7.2e-06 53.5 110 34.5
HanXRQChr09g0258311 Helianthus annuus HOM05D000018 ORTHO05D001920 7.2e-06 53.5 42 66.7
Thecc.08G120500 Theobroma cacao HOM05D000018 ORTHO05D001920 7.2e-06 53.5 42 69.0
ATR0321G001 Amborella trichopoda HOM05D000018 ORTHO05D001920 9.5e-06 53.1 42 64.3
Haze_25414 Corylus avellana HOM05D000018 ORTHO05D001920 9.5e-06 53.1 42 64.3
Manes.02G160700 Manihot esculenta HOM05D000018 ORTHO05D001920 9.5e-06 53.1 41 63.4
Sed0000032 Sechium edule HOM05D000018 ORTHO05D001920 9.5e-06 53.1 42 64.3


User provided reference genes

Program Settings