Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G363.20 Capsicum annuum HOM05D000843 ORTHO05D013550 4.5e-36 154.1 78 100.0
CAN.G52.5 Capsicum annuum HOM05D000843 ORTHO05D013550 1.8e-29 132.1 78 84.6
CAN.G45.9 Capsicum annuum HOM05D000843 ORTHO05D013550 4.1e-29 131.0 78 83.3
CAN.G613.3 Capsicum annuum HOM05D000843 ORTHO05D013550 1.5e-26 122.5 77 80.5
CAN.G177.20 Capsicum annuum HOM05D000011 ORTHO05D009225 4.4e-23 110.9 71 76.1
CAN.G1074.10 Capsicum annuum HOM05D000843 ORTHO05D013550 2.3e-16 88.6 72 72.2
CAN.G156.13 Capsicum annuum HOM05D000843 ORTHO05D013550 4.4e-15 84.3 51 82.4
CAN.G65.222 Capsicum annuum HOM05D000843 ORTHO05D000698 2.4e-13 78.6 53 79.2
Nitab4.5_0000271g0110 Nicotiana tabacum HOM05D000843 ORTHO05D000698 1.9e-10 68.9 53 66.0
Solyc06g073720.3 Solanum lycopersicum HOM05D000843 ORTHO05D000698 1.9e-10 68.9 54 72.2
Sopen06g030120 Solanum pennellii HOM05D000843 ORTHO05D000698 1.9e-10 68.9 54 72.2
PGSC0003DMG400005915 Solanum tuberosum HOM05D000843 ORTHO05D000698 7.3e-10 67.0 45 77.8
Nitab4.5_0002184g0030 Nicotiana tabacum HOM05D000843 ORTHO05D000698 9.5e-10 66.6 53 66.0
Nitab4.5_0000271g0040 Nicotiana tabacum HOM05D000843 ORTHO05D000698 6.2e-09 63.9 53 62.3
Nitab4.5_0000271g0090 Nicotiana tabacum HOM05D000843 ORTHO05D000698 6.2e-09 63.9 53 64.2
Sopen06g030130 Solanum pennellii HOM05D000843 ORTHO05D000698 8.0e-09 63.5 53 67.9
Cc01_g07490 Coffea canephora HOM05D000843 ORTHO05D000698 1.0e-08 63.2 53 64.2
Nitab4.5_0002184g0010 Nicotiana tabacum HOM05D000843 ORTHO05D000698 3.1e-08 61.6 53 58.5
Solyc06g073730.2 Solanum lycopersicum HOM05D000843 ORTHO05D000698 3.1e-08 61.6 53 66.0
CAN.G864.1 Capsicum annuum HOM05D000843 ORTHO05D000698 8.9e-08 60.1 53 60.4
Dinv25741 Davidia involucrata HOM05D000843 ORTHO05D000698 8.9e-08 60.1 53 62.3
Gohir.D07G172550 Gossypium hirsutum HOM05D000843 ORTHO05D013550 1.2e-07 59.7 53 60.4
Gorai.013G266300 Gossypium raimondii HOM05D000843 ORTHO05D000698 1.5e-07 59.3 53 58.5
Gohir.A08G196600 Gossypium hirsutum HOM05D000843 ORTHO05D000698 2.6e-07 58.5 53 58.5
Gohir.D08G213800 Gossypium hirsutum HOM05D000843 ORTHO05D000698 2.6e-07 58.5 53 58.5
Gohir.D12G083502 Gossypium hirsutum HOM05D000843 ORTHO05D013550 2.6e-07 58.5 53 58.5
Gorai.001G192700 Gossypium raimondii HOM05D000843 ORTHO05D013550 2.6e-07 58.5 53 58.5
Gorai.004G227800 Gossypium raimondii HOM05D000843 ORTHO05D000698 2.6e-07 58.5 53 58.5
Peaxi162Scf00342g00073 Petunia axillaris HOM05D000843 ORTHO05D000698 3.4e-07 58.2 51 60.8
CAN.G65.223 Capsicum annuum HOM05D000843 ORTHO05D000698 7.5e-07 57.0 53 60.4
Gohir.A05G101500 Gossypium hirsutum HOM05D000843 ORTHO05D000698 7.5e-07 57.0 53 56.6
PGSC0003DMG400008712 Solanum tuberosum HOM05D000843 ORTHO05D000698 7.5e-07 57.0 53 60.4
Actinidia22477 Actinidia chinensis HOM05D000843 ORTHO05D000698 9.8e-07 56.6 53 60.4
Duzib168G1232 Durio zibethinus HOM05D000843 ORTHO05D000698 9.8e-07 56.6 53 56.6
Medtr5g087790 Medicago truncatula HOM05D000843 ORTHO05D000698 9.8e-07 56.6 53 58.5
Nitab4.5_0000428g0210 Nicotiana tabacum HOM05D000843 ORTHO05D000698 9.8e-07 56.6 51 56.9
Nitab4.5_0007649g0020 Nicotiana tabacum HOM05D000843 ORTHO05D000698 9.8e-07 56.6 51 60.8
Thecc.09G338000 Theobroma cacao HOM05D000843 ORTHO05D000698 1.7e-06 55.8 53 56.6
Carub.0003s2073 Capsella rubella HOM05D000843 ORTHO05D000698 2.2e-06 55.5 52 55.8
Peaxi162Scf00526g00042 Petunia axillaris HOM05D000843 ORTHO05D000698 2.2e-06 55.5 52 59.6
Ca_06157_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 2.9e-06 55.1 53 54.7
Ca_29849_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 2.9e-06 55.1 53 54.7
Duzib150G0618 Durio zibethinus HOM05D000843 ORTHO05D000698 2.9e-06 55.1 53 54.7
Manes.04G052000 Manihot esculenta HOM05D000843 ORTHO05D000698 2.9e-06 55.1 53 56.6
Phvul.008G207000 Phaseolus vulgaris HOM05D000843 ORTHO05D000698 2.9e-06 55.1 53 58.5
Psat2g022320 Pisum sativum HOM05D000843 ORTHO05D000698 2.9e-06 55.1 53 54.7
TPR.G22218 Trifolium pratense HOM05D000843 ORTHO05D000698 2.9e-06 55.1 53 54.7
Eucgr.J00631 Eucalyptus grandis HOM05D000843 ORTHO05D000698 3.7e-06 54.7 54 59.3
Potri.009G159200 Populus trichocarpa HOM05D000843 ORTHO05D000698 3.7e-06 54.7 53 58.5
Sopen01g004640 Solanum pennellii HOM05D000843 ORTHO05D000698 3.7e-06 54.7 53 58.5
Dinv10728 Davidia involucrata HOM05D000843 ORTHO05D000698 4.9e-06 54.3 53 58.5
Thhalv10020292m.g Eutrema salsugineum HOM05D000843 ORTHO05D000698 4.9e-06 54.3 52 53.8
Rhsim01G0196400 Rhododendron simsii HOM05D000843 ORTHO05D000698 4.9e-06 54.3 53 58.5
Sp3g18790 Schrenkiella parvula HOM05D000843 ORTHO05D000698 4.9e-06 54.3 52 53.8
THA.LOC104826471 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 4.9e-06 54.3 53 56.6
Aa31LG8G7530 Aethionema arabicum HOM05D000843 ORTHO05D000698 6.4e-06 53.9 52 53.8
AT3G20770 Arabidopsis thaliana HOM05D000843 ORTHO05D000698 6.4e-06 53.9 52 53.8
Cpa.g.sc103.60 Carica papaya HOM05D000843 ORTHO05D000698 6.4e-06 53.9 53 54.7
Glyma.20G051500 Glycine max HOM05D000843 ORTHO05D000698 6.4e-06 53.9 53 54.7
SalBow6G1804 Salvia bowleyana HOM05D000843 ORTHO05D000698 6.4e-06 53.9 53 52.8


User provided reference genes

Program Settings