Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G362.18 Capsicum annuum HOM05D001108 ORTHO05D005418 1.8e-128 462.6 230 100.0
CAN.G248.33 Capsicum annuum HOM05D001108 ORTHO05D005418 1.0e-56 224.2 229 58.1
Sopen07g028120 Solanum pennellii HOM05D001108 ORTHO05D005418 3.9e-51 205.7 228 54.4
Solyc07g054190.4 Solanum lycopersicum HOM05D001108 ORTHO05D005418 1.2e-49 200.7 228 53.9
CAN.G248.11 Capsicum annuum HOM05D001108 ORTHO05D005418 2.1e-49 199.9 217 55.8
Nitab4.5_0000512g0050 Nicotiana tabacum HOM05D001108 ORTHO05D005418 3.4e-47 192.6 229 52.0
Nitab4.5_0004071g0020 Nicotiana tabacum HOM05D001108 ORTHO05D005418 3.4e-47 192.6 229 52.4
CAN.G248.16 Capsicum annuum HOM05D001108 ORTHO05D005418 5.4e-45 185.3 164 64.0
CAN.G851.1 Capsicum annuum HOM05D001108 ORTHO05D005418 5.4e-45 185.3 164 64.0
PGSC0003DMG400018350 Solanum tuberosum HOM05D001108 ORTHO05D005418 9.2e-45 184.5 208 53.8
Migut.C01348 Erythranthe guttata HOM05D001108 ORTHO05D005418 3.9e-43 179.1 226 48.2
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 8.6e-43 177.9 180 58.9
SalBow1G0161 Salvia bowleyana HOM05D001108 ORTHO05D005418 1.9e-42 176.8 222 48.2
MSTRG.5628 Avicennia marina HOM05D001108 ORTHO05D005418 2.3e-40 169.9 222 48.6
unitig_60.g25406 Utricularia gibba HOM05D001108 ORTHO05D005418 3.1e-40 169.5 234 46.2
Sc21g0002830 Simmondsia chinensis HOM05D001108 ORTHO05D005418 3.4e-39 166.0 219 47.0
Cc05_g07130 Coffea canephora HOM05D001108 ORTHO05D005418 7.5e-39 164.9 209 51.2
Lsat_1_v5_gn_3_37280 Lactuca sativa HOM05D001108 ORTHO05D005418 2.2e-38 163.3 216 46.3
Lsat_1_v5_gn_4_70021 Lactuca sativa HOM05D001108 ORTHO05D005418 2.9e-38 162.9 221 44.8
Nn1g04079 Nelumbo nucifera HOM05D001108 ORTHO05D005418 2.9e-38 162.9 229 47.2
Thecc.05G172000 Theobroma cacao HOM05D001108 ORTHO05D005418 3.7e-38 162.5 226 46.5
CSS0039738 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 6.4e-38 161.8 233 45.5
CSS0042510 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 6.4e-38 161.8 217 47.0
HanXRQChr06g0171321 Helianthus annuus HOM05D001108 ORTHO05D005418 6.4e-38 161.8 231 45.9
CSS0002926 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.1e-37 161.0 217 47.0
Haze_21052 Corylus avellana HOM05D001108 ORTHO05D001619 1.1e-37 161.0 239 44.4
Ah.01g015170 Amaranthus hybridus HOM05D001108 ORTHO05D005418 1.9e-37 160.2 218 44.5
vmacro12300 Vaccinium macrocarpon HOM05D001108 ORTHO05D005418 3.2e-37 159.5 220 46.4
EL10Ac9g20764 Beta vulgaris HOM05D001108 ORTHO05D005418 5.4e-37 158.7 219 45.7
Hund07929 Selenicereus undatus HOM05D001108 ORTHO05D005418 5.4e-37 158.7 217 47.0
QL08p038694 Quercus lobata HOM05D001108 ORTHO05D005418 7.1e-37 158.3 220 48.2
AUR62019549 Chenopodium quinoa HOM05D001108 ORTHO05D005418 9.2e-37 157.9 219 42.9
Ciclev10013903m.g Citrus clementina HOM05D001108 ORTHO05D005418 9.2e-37 157.9 220 45.0
MD09G1247800 Malus domestica HOM05D001108 ORTHO05D005418 1.2e-36 157.5 220 45.0
CANSAT80G2367 Cannabis sativa HOM05D001108 ORTHO05D005418 1.6e-36 157.1 223 44.8
COL.COLO4_33977 Corchorus olitorius HOM05D001108 ORTHO05D005418 1.6e-36 157.1 236 44.5
Rhsim06G0142500 Rhododendron simsii HOM05D001108 ORTHO05D005418 1.6e-36 157.1 222 45.0
CSS0044059 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 2.7e-36 156.4 209 47.4
Atru.chr6.2997 Acer truncatum HOM05D001108 ORTHO05D005418 3.5e-36 156.0 223 44.8
Prupe.3G137500 Prunus persica HOM05D001108 ORTHO05D005418 3.5e-36 156.0 221 45.7
TAR627G0387 Trochodendron aralioides HOM05D001108 ORTHO05D005418 3.5e-36 156.0 222 45.9
AUR62036092 Chenopodium quinoa HOM05D001108 ORTHO05D005418 6.0e-36 155.2 219 42.0
DCAR_013007 Daucus carota HOM05D001108 ORTHO05D005418 7.8e-36 154.8 210 48.6
Gohir.D09G124300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 7.8e-36 154.8 223 46.2
HanXRQChr06g0171311 Helianthus annuus HOM05D001108 ORTHO05D005418 7.8e-36 154.8 220 44.1
Gorai.006G143100 Gossypium raimondii HOM05D001108 ORTHO05D005418 1.0e-35 154.5 223 46.2
PGR142G4253 Punica granatum HOM05D001108 ORTHO05D005418 1.0e-35 154.5 216 45.8
EL10Ac4g08320 Beta vulgaris HOM05D001108 ORTHO05D005418 1.3e-35 154.1 219 41.1
Haze_13157 Corylus avellana HOM05D001108 ORTHO05D005418 1.7e-35 153.7 209 48.8
Gohir.A09G128300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 1.7e-35 153.7 223 46.2
PSO478G1555 Papaver somniferum HOM05D001108 ORTHO05D005418 1.7e-35 153.7 216 43.5
CiPaw.04G125800 Carya illinoinensis HOM05D001108 ORTHO05D005418 3.0e-35 152.9 220 44.1
Manes.13G146800 Manihot esculenta HOM05D001108 ORTHO05D005418 3.0e-35 152.9 222 42.8
PSO782G4551 Papaver somniferum HOM05D001108 ORTHO05D005418 3.9e-35 152.5 216 43.5
Ca_20056_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 6.6e-35 151.8 216 44.0
Duzib093G1006 Durio zibethinus HOM05D001108 ORTHO05D005418 6.6e-35 151.8 219 45.7
RcHm_v2.0_Chr7g0232111 Rosa chinensis HOM05D001108 ORTHO05D005418 6.6e-35 151.8 220 42.3
Lalb_Chr03g0029441 Lupinus albus HOM05D001108 ORTHO05D005418 1.1e-34 151.0 222 41.9
Nn1g06569 Nelumbo nucifera HOM05D001108 ORTHO05D005418 1.1e-34 151.0 166 53.0
PSO675G3815 Papaver somniferum HOM05D001108 ORTHO05D005418 1.1e-34 151.0 216 43.5
PSO541G4613 Papaver somniferum HOM05D001108 ORTHO05D005418 1.5e-34 150.6 216 43.1
TWI75G0959 Tripterygium wilfordii HOM05D001108 ORTHO05D005418 1.5e-34 150.6 237 41.8
Cfa017142 Carpinus fangiana HOM05D001108 ORTHO05D005418 1.9e-34 150.2 209 46.4
Lj3g0011439 Lotus japonicus HOM05D001108 ORTHO05D005418 4.3e-34 149.1 219 44.3
Dinv26419 Davidia involucrata HOM05D001108 ORTHO05D005418 7.3e-34 148.3 155 56.8
Dinv23643 Davidia involucrata HOM05D001108 ORTHO05D005418 1.2e-33 147.5 156 57.1
Eucgr.K01017 Eucalyptus grandis HOM05D001108 ORTHO05D005418 6.2e-33 145.2 218 42.2
FvH4_5g33380 Fragaria vesca HOM05D001108 ORTHO05D005418 6.2e-33 145.2 222 41.0
FAN18G0425 Fragaria x ananassa HOM05D001108 ORTHO05D005418 6.2e-33 145.2 222 41.0
MD17G1240700 Malus domestica HOM05D001108 ORTHO05D005418 6.2e-33 145.2 213 44.6
ClCG02G017630 Citrullus lanatus HOM05D001108 ORTHO05D005418 8.1e-33 144.8 221 42.5
Sabra19G0110800 Salix brachista HOM05D001108 ORTHO05D005418 1.1e-32 144.4 223 42.6
Sabra19G0112200 Salix brachista HOM05D001108 ORTHO05D005418 1.1e-32 144.4 223 42.6
SGA_v2.0_scaffold92G28314 Striga asiatica HOM05D001108 ORTHO05D005418 1.1e-32 144.4 219 44.3
ECA246G0340 Erigeron canadensis HOM05D001108 ORTHO05D005418 2.4e-32 143.3 209 45.5
Potri.019G100500 Populus trichocarpa HOM05D001108 ORTHO05D005418 2.4e-32 143.3 220 43.6
FAN04G2154 Fragaria x ananassa HOM05D001108 ORTHO05D005418 4.0e-32 142.5 222 40.5
VMungo1127G1775 Vigna mungo HOM05D001108 ORTHO05D005418 5.2e-32 142.1 216 43.1
Duzib128G0360 Durio zibethinus HOM05D001108 ORTHO05D005418 8.9e-32 141.4 167 49.7
Actinidia11036 Actinidia chinensis HOM05D001108 ORTHO05D005418 1.5e-31 140.6 171 51.5
CsaV3_6G013000 Cucumis sativus L. HOM05D001108 ORTHO05D005418 1.5e-31 140.6 233 40.3
CsaV3_6G012940 Cucumis sativus L. HOM05D001108 ORTHO05D005418 2.0e-31 140.2 220 42.3
AT2G20690 Arabidopsis thaliana HOM05D001108 ORTHO05D005418 2.6e-31 139.8 227 40.1
CDE02G0464 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 4.4e-31 139.0 204 41.7
Carub.0003s3520 Capsella rubella HOM05D001108 ORTHO05D005418 5.8e-31 138.7 238 39.5
Cpa.g.sc34.160 Carica papaya HOM05D001108 ORTHO05D005418 5.8e-31 138.7 168 48.8
CDE09G0563 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 7.6e-31 138.3 155 49.0
AL3G53780 Arabidopsis lyrata HOM05D001108 ORTHO05D005418 9.9e-31 137.9 212 41.5
C07p00210 Brassica napus HOM05D001108 ORTHO05D005418 1.3e-30 137.5 226 40.3
BcaB03g16863 Brassica carinata HOM05D001108 ORTHO05D005418 1.7e-30 137.1 227 41.4
THA.LOC104824701 Tarenaya hassleriana HOM05D001108 ORTHO05D005418 1.7e-30 137.1 166 49.4
Phvul.011G114100 Phaseolus vulgaris HOM05D001108 ORTHO05D005418 2.2e-30 136.7 222 41.0
A07p00070 Brassica napus HOM05D001108 ORTHO05D005418 2.9e-30 136.3 227 41.0
AUR62002952 Chenopodium quinoa HOM05D001108 ORTHO05D005418 2.9e-30 136.3 239 39.3
Glyma.12G112900 Glycine max HOM05D001108 ORTHO05D005418 2.9e-30 136.3 219 39.7
Medtr1g066930 Medicago truncatula HOM05D001108 ORTHO05D005418 2.9e-30 136.3 218 40.8
Sed0006413 Sechium edule HOM05D001108 ORTHO05D005418 3.8e-30 136.0 168 47.6
Medtr0004s0220 Medicago truncatula HOM05D001108 ORTHO05D005418 4.9e-30 135.6 167 46.7
BraA07t27798Z Brassica rapa HOM05D001108 ORTHO05D005418 6.4e-30 135.2 227 41.0
Lj1P722T15 Lonicera japonica HOM05D001108 ORTHO05D005418 6.4e-30 135.2 193 47.7
CARHR111330 Cardamine hirsuta HOM05D001108 ORTHO05D005418 8.4e-30 134.8 224 41.1
Potri.013G131800 Populus trichocarpa HOM05D001108 ORTHO05D005418 8.4e-30 134.8 166 48.2
BolC7t40471H Brassica oleracea HOM05D001108 ORTHO05D005418 1.1e-29 134.4 226 39.4
MELO3C000760.2 Cucumis melo HOM05D001108 ORTHO05D005418 1.1e-29 134.4 182 46.2
Thhalv10002078m.g Eutrema salsugineum HOM05D001108 ORTHO05D005418 1.1e-29 134.4 212 41.0
Aqoxy1G02436 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 1.4e-29 134.0 190 46.8
Sabra13G0111300 Salix brachista HOM05D001108 ORTHO05D005418 1.4e-29 134.0 166 47.6
BcaC06g36761 Brassica carinata HOM05D001108 ORTHO05D005418 1.9e-29 133.7 210 41.0
ATR1096G056 Amborella trichopoda HOM05D001108 ORTHO05D005418 2.4e-29 133.3 232 42.2
Ah.04g164360 Amaranthus hybridus HOM05D001108 ORTHO05D005418 3.2e-29 132.9 203 40.9
AUR62007757 Chenopodium quinoa HOM05D001108 ORTHO05D005418 7.1e-29 131.7 231 39.8
SEGI_26411 Sequoiadendron giganteum HOM05D001108 ORTHO05D005418 7.1e-29 131.7 237 38.0
HPP92_003131 Vanilla planifolia HOM05D001108 ORTHO05D005418 1.2e-28 131.0 169 45.6
Sp3g33940 Schrenkiella parvula HOM05D001108 ORTHO05D005418 2.1e-28 130.2 200 42.0
arahy.Tifrunner.gnm1.ann1.SGC5R3 Arachis hypogaea HOM05D001108 ORTHO05D005418 4.6e-28 129.0 179 46.9
SMO137G0361 Selaginella moellendorffii HOM05D001108 ORTHO05D005418 4.6e-28 129.0 163 46.6
arahy.Tifrunner.gnm1.ann1.85LIYI Arachis hypogaea HOM05D001108 ORTHO05D005418 7.8e-28 128.3 218 44.0
arahy.Tifrunner.gnm1.ann1.PPEG78 Arachis hypogaea HOM05D001108 ORTHO05D005418 7.8e-28 128.3 218 44.0
Pp3c2_19260 Physcomitrium patens HOM05D001108 ORTHO05D005418 7.8e-28 128.3 218 41.3
HanXRQChr06g0169711 Helianthus annuus HOM05D001108 ORTHO05D005418 2.3e-27 126.7 209 43.1
arahy.Tifrunner.gnm1.ann1.S0UG05 Arachis hypogaea HOM05D001108 ORTHO05D005418 1.5e-26 124.0 164 47.6
AagrBONN_evm.TU.Sc2ySwM_228.5414 Anthoceros agrestis HOM05D001108 ORTHO05D005418 4.3e-26 122.5 166 44.0
CBR_g36747 Chara braunii HOM05D001108 ORTHO05D005418 5.6e-26 122.1 165 44.8
Mapoly0026s0114 Marchantia polymorpha HOM05D001108 ORTHO05D005418 5.6e-26 122.1 212 39.2
CANSAT80G2295 Cannabis sativa HOM05D001108 ORTHO05D005418 5.3e-24 115.5 133 52.6
Cpa.g.sc34.159 Carica papaya HOM05D001108 ORTHO05D005418 1.5e-23 114.0 181 38.1
Aqoxy1G02437 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 3.4e-23 112.8 170 41.2
BcaC04g22783 Brassica carinata HOM05D001108 ORTHO05D005418 4.9e-22 109.0 173 42.8
MD09G1265300 Malus domestica HOM05D001108 ORTHO05D005418 8.4e-22 108.2 183 41.0
C09p15330 Brassica napus HOM05D001108 ORTHO05D005418 4.2e-21 105.9 107 54.2
unitig_88.g27587 Utricularia gibba HOM05D001108 ORTHO05D005418 7.8e-20 101.7 102 56.9
Zm00001eb410410 Zea mays HOM05D001108 ORTHO05D005418 7.3e-18 95.1 175 36.6
Zm00001eb410210 Zea mays HOM05D001108 ORTHO05D005418 4.8e-17 92.4 176 35.8
Cfa026241 Carpinus fangiana HOM05D001108 ORTHO05D005418 1.8e-16 90.5 138 42.8
Sabra19G0110900 Salix brachista HOM05D001108 ORTHO05D005418 4.0e-16 89.4 225 37.3
Os12g0541000 Oryza sativa ssp. japonica HOM05D001108 ORTHO05D005418 9.0e-16 88.2 175 32.6
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 3.4e-15 86.3 206 34.5
Psat4g001880 Pisum sativum HOM05D001108 ORTHO05D005418 2.2e-14 83.6 217 30.0
Psat5g098840 Pisum sativum HOM05D001108 ORTHO05D005418 2.3e-11 73.6 87 41.4
Lsat_1_v5_gn_8_150060 Lactuca sativa HOM05D001108 ORTHO05D005418 5.6e-10 68.9 71 52.1
Cre06.g296600 Chlamydomonas reinhardtii HOM05D001108 ORTHO05D005418 5.3e-08 62.4 157 28.7
Medtr4g063470 Medicago truncatula HOM05D001108 ORTHO05D005418 5.3e-08 62.4 73 46.6
Psat5g097760 Pisum sativum HOM05D002292 ORTHO05D005418 1.5e-07 60.8 83 37.3
unitig_88.g27586 Utricularia gibba HOM05D001108 ORTHO05D005418 2.0e-07 60.5 112 35.7
PRCOL_00001102 Prasinoderma coloniale HOM05D001108 ORTHO05D005418 4.5e-07 59.3 131 32.8
AagrBONN_evm.TU.Sc2ySwM_228.459 Anthoceros agrestis HOM05D001108 ORTHO05D005418 1.7e-06 57.4 54 44.4
Cfa014613 Carpinus fangiana HOM05D001108 ORTHO05D005418 2.9e-06 56.6 68 50.0
Lsat_1_v5_gn_4_42240 Lactuca sativa HOM05D001108 ORTHO05D005418 4.9e-06 55.8 113 38.9
Ca_28725_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 6.4e-06 55.5 130 32.3


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