Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G359.1 Capsicum annuum HOM05D000533 ORTHO05D001069 3.6e-24 114.0 54 100.0
Actinidia34825 Actinidia chinensis HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
ATR1210G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
arahy.Tifrunner.gnm1.ann1.0X9YMY Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
arahy.Tifrunner.gnm1.ann1.4DS86I Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
arahy.Tifrunner.gnm1.ann1.AFL9HK Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
arahy.Tifrunner.gnm1.ann1.ETC72T Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
arahy.Tifrunner.gnm1.ann1.F9JXCN Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
arahy.Tifrunner.gnm1.ann1.I47HSX Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
arahy.Tifrunner.gnm1.ann1.LX7XQ5 Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
arahy.Tifrunner.gnm1.ann1.P9L1XB Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
arahy.Tifrunner.gnm1.ann1.SG2Q82 Arachis hypogaea HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
Cpa.g.sc263.13 Carica papaya HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
Cfa023037 Carpinus fangiana HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
CiPaw.12G057900 Carya illinoinensis HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
DCAR_032449 Daucus carota HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
HanXRQChr08g0236031 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
HanXRQChr10g0297201 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
HanXRQChr14g0434371 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
HanXRQMTg0579581 Helianthus annuus HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
Nitab4.5_0004030g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
Oeu057346.1 Olea europaea HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
Peaxi162Scf00197g00048 Petunia axillaris HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
RhsimMtG0002300 Rhododendron simsii HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
Sed0003286 Sechium edule HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
Sed0012936 Sechium edule HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
Solyc00g500184.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
SGA_v2.0_scaffold400G50831 Striga asiatica HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
unitig_87.g27981 Utricularia gibba HOM05D000533 ORTHO05D001069 1.2e-16 89.0 45 91.1
CAN.G267.14 Capsicum annuum HOM05D000533 ORTHO05D001069 3.6e-16 87.4 45 88.9
CsaV3_6G024010 Cucumis sativus L. HOM05D000533 ORTHO05D001069 3.6e-16 87.4 45 88.9
CsaV3_6G025210 Cucumis sativus L. HOM05D000533 ORTHO05D001069 3.6e-16 87.4 45 88.9
CsaV3_6G025290 Cucumis sativus L. HOM05D000533 ORTHO05D001069 3.6e-16 87.4 45 88.9
CsaV3_UNG208520 Cucumis sativus L. HOM05D000533 ORTHO05D001069 3.6e-16 87.4 45 88.9
Lsat_1_v5_gn_7_67821 Lactuca sativa HOM05D000533 ORTHO05D001069 3.6e-16 87.4 45 88.9
Nitab4.5_0007336g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.6e-16 87.4 45 88.9
CAN.G497.42 Capsicum annuum HOM05D000533 ORTHO05D001069 4.7e-16 87.0 47 87.2
Aa31csc1081G30 Aethionema arabicum HOM05D000533 ORTHO05D001069 6.1e-16 86.7 45 88.9
ATMG00510 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 6.1e-16 86.7 45 88.9
A04p09590 Brassica napus HOM05D000533 ORTHO05D001069 6.1e-16 86.7 45 88.9
BraSC48t46291Z Brassica rapa HOM05D000533 ORTHO05D001069 6.1e-16 86.7 45 88.9
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 6.1e-16 86.7 45 88.9
ECA039G0028 Erigeron canadensis HOM05D003783 ORTHO05D004568 6.1e-16 86.7 45 88.9
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 6.1e-16 86.7 45 88.9
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 6.1e-16 86.7 45 88.9
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 6.1e-16 86.7 45 88.9
SabraMtG0006600 Salix brachista HOM05D000533 ORTHO05D001069 6.1e-16 86.7 45 88.9
Sp3g25570 Schrenkiella parvula HOM05D000533 ORTHO05D001069 6.1e-16 86.7 45 88.9
Solyc09g009360.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 8.0e-16 86.3 45 88.9
HanXRQChr01g0029681 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-15 85.9 45 88.9
Hma1.2p1_0386F.1_g141700 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 1.0e-15 85.9 45 88.9
LjContig00315g0008577 Lotus japonicus HOM05D000533 ORTHO05D001069 1.0e-15 85.9 45 88.9
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.4e-15 85.5 45 86.7
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 1.4e-15 85.5 45 86.7
Thhalv10028891m.g Eutrema salsugineum HOM05D000533 ORTHO05D001069 1.8e-15 85.1 45 88.9
Nitab4.5_0001919g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.8e-15 85.1 45 86.7
Ah.10g028340 Amaranthus hybridus HOM05D000533 ORTHO05D001069 2.3e-15 84.7 45 86.7
CDE02G3250 Ceratophyllum demersum HOM05D000533 ORTHO05D001069 4.0e-15 84.0 45 86.7
CDE02G3581 Ceratophyllum demersum HOM05D000533 ORTHO05D001069 4.0e-15 84.0 45 86.7
Dinv06691 Davidia involucrata HOM05D000533 ORTHO05D001069 8.9e-15 82.8 45 86.7
Lalb_Chr00c24g0407301 Lupinus albus HOM05D000533 ORTHO05D001069 8.9e-15 82.8 45 86.7
Lalb_Chr00c54g0413531 Lupinus albus HOM05D000533 ORTHO05D001069 8.9e-15 82.8 45 86.7
Sopen10g026770 Solanum pennellii HOM05D000533 ORTHO05D001069 8.9e-15 82.8 41 92.7
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 1.5e-14 82.0 45 82.2
Lalb_Chr01g0010881 Lupinus albus HOM05D000533 ORTHO05D001069 1.5e-14 82.0 45 84.4
Nn1g10104 Nelumbo nucifera HOM05D000533 ORTHO05D001069 1.5e-14 82.0 45 84.4
ATR1208G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 2.0e-14 81.6 45 80.0
Lalb_Chr10g0094591 Lupinus albus HOM05D000533 ORTHO05D001069 2.0e-14 81.6 45 84.4
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 2.6e-14 81.3 43 81.4
Aqoxy3G01141 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 3.4e-14 80.9 45 84.4
Ca_17160_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 3.4e-14 80.9 44 84.1
TAR383G0007 Trochodendron aralioides HOM05D000533 ORTHO05D001069 3.4e-14 80.9 45 84.4
Lalb_Chr01g0010941 Lupinus albus HOM05D000533 ORTHO05D001069 5.7e-14 80.1 45 84.4
Nitab4.5_0004008g0030 Nicotiana tabacum HOM05D000217 ORTHO05D000121 5.7e-14 80.1 45 84.4
Nitab4.5_0012445g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.7e-14 80.1 41 90.2
GSVIVG01006222001 Vitis vinifera HOM05D000533 ORTHO05D001069 7.5e-14 79.7 45 84.4
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 9.8e-14 79.3 45 75.6
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 9.8e-14 79.3 45 80.0
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 1.7e-13 78.6 45 82.2
Ca_26704_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 1.7e-13 78.6 41 87.8
Ca_26706_v3 Cicer arietinum L. HOM05D000533 ORTHO05D001069 1.7e-13 78.6 41 87.8
Nitab4.5_0000172g0870 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.7e-13 78.6 45 82.2
Aqoxy4G01614 Aquilegia oxysepala HOM05D000533 ORTHO05D001069 2.8e-13 77.8 45 82.2
Nitab4.5_0000120g0040 Nicotiana tabacum HOM05D000533 ORTHO05D012473 2.8e-13 77.8 45 82.2
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 4.9e-13 77.0 43 74.4
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 6.3e-13 76.6 45 77.8
CAN.G993.10 Capsicum annuum HOM05D000533 ORTHO05D001069 8.3e-13 76.3 41 85.4
Glyma.14G103300 Glycine max HOM05D000533 ORTHO05D001069 1.1e-12 75.9 45 82.2
Nitab4.5_0006806g0120 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.1e-12 75.9 45 77.8
Gohir.A03G134205 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.8e-12 75.1 36 94.4
Nitab4.5_0001153g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.4e-12 73.6 41 85.4
PGSC0003DMG400030943 Solanum tuberosum HOM05D000533 ORTHO05D001069 1.6e-11 72.0 45 80.0
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 4.5e-11 70.5 45 71.1
Psat0s3560g0120 Pisum sativum HOM05D000533 ORTHO05D001069 5.9e-11 70.1 36 88.9
Ca_26685_v3 Cicer arietinum L. HOM05D000533 ORTHO05D013765 7.8e-11 69.7 37 81.1
arahy.Tifrunner.gnm1.ann1.MFEB25 Arachis hypogaea HOM05D000533 ORTHO05D001069 6.6e-10 66.6 34 91.2
Solyc07g042310.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 6.6e-10 66.6 40 75.0
Lsat_1_v5_gn_4_171240 Lactuca sativa HOM05D000533 ORTHO05D001069 2.5e-09 64.7 45 73.3
Ca_26184_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 4.3e-09 63.9 37 78.4
Solyc12g036600.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 7.3e-09 63.2 32 87.5
BcaC09g49600 Brassica carinata HOM05D000533 ORTHO05D001069 9.5e-09 62.8 32 90.6
BolSC28t60325H Brassica oleracea HOM05D000533 ORTHO05D001069 8.0e-08 59.7 31 87.1
BolSC28t60427H Brassica oleracea HOM05D000533 ORTHO05D001069 8.0e-08 59.7 31 87.1
BraSC48t46307Z Brassica rapa HOM05D000533 ORTHO05D001069 8.0e-08 59.7 31 87.1
Solyc10g052800.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.8e-07 58.5 39 69.2
CAN.G1103.7 Capsicum annuum HOM05D000533 ORTHO05D001069 2.3e-07 58.2 31 83.9
C01p34660 Brassica napus HOM05D000533 ORTHO05D001069 5.2e-07 57.0 29 89.7
SHI25679 Sapria himalayana HOM05D000533 ORTHO05D001069 4.4e-06 53.9 30 83.3


User provided reference genes

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