Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G358.33 Capsicum annuum HOM05D010665 ORTHO05D012755 9.6e-55 217.2 173 100.0
PGSC0003DMG400003531 Solanum tuberosum HOM05D010665 ORTHO05D012755 9.4e-34 147.5 176 78.4
Sopen02g029510 Solanum pennellii HOM05D010665 ORTHO05D012755 2.7e-33 146.0 176 77.8
Solyc02g084840.3 Solanum lycopersicum HOM05D010665 ORTHO05D012755 7.9e-33 144.4 176 77.3
Nitab4.5_0003883g0030 Nicotiana tabacum HOM05D010665 ORTHO05D012755 4.8e-30 135.2 157 68.2
Nitab4.5_0000723g0150 Nicotiana tabacum HOM05D010665 ORTHO05D012755 1.0e-27 127.5 159 65.4
Peaxi162Scf00418g00925 Petunia axillaris HOM05D010665 ORTHO05D012755 1.0e-27 127.5 170 65.3
CANSAT01G1119 Cannabis sativa HOM05D010665 ORTHO05D018846 7.2e-10 68.2 182 50.5
QL06p035188 Quercus lobata HOM05D049571 ORTHO05D012755 4.7e-09 65.5 149 56.4
Prupe.7G161200 Prunus persica HOM05D031257 ORTHO05D012755 8.0e-09 64.7 143 51.0
PGR102G0811 Punica granatum HOM05D010665 ORTHO05D012755 3.4e-07 59.3 153 52.3
Rhsim08G0122300 Rhododendron simsii HOM05D010665 ORTHO05D012755 4.4e-07 58.9 92 62.0
Oeu002036.1 Olea europaea HOM05D010665 ORTHO05D018846 5.7e-07 58.5 135 49.6
MD02G1139900 Malus domestica HOM05D031257 ORTHO05D012755 7.5e-07 58.2 143 50.3
BcaB07g29669 Brassica carinata HOM05D010201 ORTHO05D012293 1.3e-06 57.4 151 51.0
THA.LOC104821305 Tarenaya hassleriana HOM05D010201 ORTHO05D012293 1.7e-06 57.0 153 46.4
Eucgr.J02380 Eucalyptus grandis HOM05D010665 ORTHO05D012755 2.2e-06 56.6 146 43.2
Zm00001eb285360 Zea mays HOM05D020672 ORTHO05D012907 2.2e-06 56.6 86 61.6
GSVIVG01018878001 Vitis vinifera HOM05D014189 ORTHO05D018846 2.8e-06 56.2 99 41.4
BcaNung04503 Brassica carinata HOM05D010201 ORTHO05D012293 3.7e-06 55.8 168 44.6
BcaNung04501 Brassica carinata HOM05D010201 ORTHO05D012293 4.9e-06 55.5 170 36.5
Cfa006910 Carpinus fangiana HOM05D014189 ORTHO05D012907 4.9e-06 55.5 150 44.0
Ciclev10026675m.g Citrus clementina HOM05D010665 ORTHO05D012755 4.9e-06 55.5 157 40.8
HanXRQChr14g0441271 Helianthus annuus HOM05D021676 ORTHO05D016995 4.9e-06 55.5 74 64.9
Cc07_g10030 Coffea canephora HOM05D010665 ORTHO05D018846 8.3e-06 54.7 125 44.8


User provided reference genes

Program Settings