Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G358.14 Capsicum annuum HOM05D007510 ORTHO05D009587 1.1e-84 316.6 159 100.0
Sopen02g029320 Solanum pennellii HOM05D007510 ORTHO05D009587 8.0e-56 220.7 153 76.5
Solyc02g084650.3 Solanum lycopersicum HOM05D007510 ORTHO05D009587 1.0e-55 220.3 153 76.5
Nitab4.5_0002266g0030 Nicotiana tabacum HOM05D007510 ORTHO05D009587 1.7e-53 213.0 159 71.1
Nitab4.5_0012525g0020 Nicotiana tabacum HOM05D007510 ORTHO05D009587 9.2e-52 207.2 156 69.9
PGSC0003DMG400003618 Solanum tuberosum HOM05D007510 ORTHO05D009587 9.5e-49 197.2 159 67.9
Oeu037724.1 Olea europaea HOM05D007510 ORTHO05D009587 7.1e-20 101.3 121 47.1
Oeu037725.1 Olea europaea HOM05D007510 ORTHO05D009587 9.3e-20 100.9 121 47.1
SalBow5G2055 Salvia bowleyana HOM05D007510 ORTHO05D009587 2.1e-19 99.8 153 42.5
Actinidia26112 Actinidia chinensis HOM05D007510 ORTHO05D009587 4.3e-17 92.0 142 42.3
ClCG01G020060 Citrullus lanatus HOM05D007510 ORTHO05D000703 7.3e-17 91.3 73 57.5
vmacro22104 Vaccinium macrocarpon HOM05D007510 ORTHO05D009587 1.3e-16 90.5 129 44.2
SGA_v2.0_scaffold280G46849 Striga asiatica HOM05D007510 ORTHO05D009587 1.6e-16 90.1 142 42.3
CiPaw.04G025800 Carya illinoinensis HOM05D007510 ORTHO05D009587 2.1e-16 89.7 80 56.2
CSS0038414 Camellia sinensis var. sinensis HOM05D007510 ORTHO05D009587 4.8e-16 88.6 136 36.8
TPR.G21530 Trifolium pratense HOM05D007510 ORTHO05D009587 6.2e-16 88.2 55 72.7
CiPaw.08G136300 Carya illinoinensis HOM05D007510 ORTHO05D009587 8.1e-16 87.8 77 54.5
A02p04090 Brassica napus HOM05D007510 ORTHO05D009587 2.4e-15 86.3 106 44.3
A10p22120 Brassica napus HOM05D007510 ORTHO05D009587 2.4e-15 86.3 72 58.3
BraA10t44271Z Brassica rapa HOM05D007510 ORTHO05D009587 2.4e-15 86.3 72 58.3
Migut.H02491 Erythranthe guttata HOM05D007510 ORTHO05D009587 2.4e-15 86.3 149 37.6
Medtr8g076660 Medicago truncatula HOM05D007510 ORTHO05D009587 2.4e-15 86.3 59 67.8
AT5G17280 Arabidopsis thaliana HOM05D007510 ORTHO05D009587 4.0e-15 85.5 75 48.0
Aa31LG1G14840 Aethionema arabicum HOM05D007510 ORTHO05D009587 6.9e-15 84.7 117 39.3
HanXRQChr11g0325681 Helianthus annuus HOM05D007510 ORTHO05D009587 9.0e-15 84.3 96 52.1
CsaV3_6G046830 Cucumis sativus L. HOM05D007510 ORTHO05D009587 1.5e-14 83.6 64 60.9
COL.COLO4_21980 Corchorus olitorius HOM05D001094 ORTHO05D001050 2.0e-14 83.2 67 58.2
Lsat_1_v5_gn_4_151140 Lactuca sativa HOM05D007510 ORTHO05D009587 2.0e-14 83.2 73 54.8
Lalb_Chr05g0229951 Lupinus albus HOM05D007510 ORTHO05D009587 2.0e-14 83.2 46 76.1
arahy.Tifrunner.gnm1.ann1.X6BQPF Arachis hypogaea HOM05D007510 ORTHO05D009587 2.6e-14 82.8 44 75.0
Ciclev10026716m.g Citrus clementina HOM05D007510 ORTHO05D009587 2.6e-14 82.8 73 53.4
Sp6g26950 Schrenkiella parvula HOM05D007510 ORTHO05D009587 2.6e-14 82.8 69 56.5
MELO3C007880.2 Cucumis melo HOM05D007510 ORTHO05D009587 3.4e-14 82.4 68 57.4
Thhalv10014934m.g Eutrema salsugineum HOM05D007510 ORTHO05D009587 3.4e-14 82.4 85 51.8
Glyma.02G052200 Glycine max HOM05D007510 ORTHO05D009587 4.4e-14 82.0 47 74.5
VMungo0251G3154 Vigna mungo HOM05D007510 ORTHO05D009587 4.4e-14 82.0 69 53.6
BraA02t05372Z Brassica rapa HOM05D007510 ORTHO05D009587 5.8e-14 81.6 80 52.5
Psat4g096640 Pisum sativum HOM05D007510 ORTHO05D009587 5.8e-14 81.6 49 67.3
Aa31LG11G5850 Aethionema arabicum HOM05D007510 ORTHO05D009587 7.6e-14 81.3 107 46.7
ECA232G0818 Erigeron canadensis HOM05D001094 ORTHO05D001050 7.6e-14 81.3 69 55.1
HanXRQChr15g0494821 Helianthus annuus HOM05D007510 ORTHO05D009587 7.6e-14 81.3 95 51.6
BcaNung00409 Brassica carinata HOM05D007510 ORTHO05D009587 9.9e-14 80.9 110 41.8
Lj4g0024164 Lotus japonicus HOM05D007510 ORTHO05D009587 1.3e-13 80.5 61 60.7
BcaB08g36792 Brassica carinata HOM05D007510 ORTHO05D009587 1.7e-13 80.1 109 44.0
BcaC04g18811 Brassica carinata HOM05D007510 ORTHO05D009587 2.2e-13 79.7 72 52.8
C09p59910 Brassica napus HOM05D007510 ORTHO05D009587 2.9e-13 79.3 72 52.8
BolC9t58827H Brassica oleracea HOM05D007510 ORTHO05D009587 2.9e-13 79.3 72 52.8
QL06p034549 Quercus lobata HOM05D007510 ORTHO05D009587 2.9e-13 79.3 40 80.0
unitig_27.g25318 Utricularia gibba HOM05D007510 ORTHO05D009587 2.9e-13 79.3 132 39.4
Gohir.D03G011300 Gossypium hirsutum HOM05D007510 ORTHO05D009587 4.9e-13 78.6 134 41.8
Gorai.003G011700 Gossypium raimondii HOM05D007510 ORTHO05D009587 4.9e-13 78.6 134 41.8
AL6G28360 Arabidopsis lyrata HOM05D007510 ORTHO05D009587 6.4e-13 78.2 99 43.4
Carub.0006s1547 Capsella rubella HOM05D007510 ORTHO05D009587 6.4e-13 78.2 87 48.3
Gohir.A02G168700 Gossypium hirsutum HOM05D007510 ORTHO05D009587 6.4e-13 78.2 107 44.9
Rhsim08G0036700 Rhododendron simsii HOM05D007510 ORTHO05D009587 6.4e-13 78.2 115 47.8
TWI09G1276 Tripterygium wilfordii HOM05D007510 ORTHO05D009587 6.4e-13 78.2 41 75.6
Nn6g32199 Nelumbo nucifera HOM05D007510 ORTHO05D009587 8.4e-13 77.8 104 41.3
CANSAT78G1864 Cannabis sativa HOM05D007510 ORTHO05D009587 1.1e-12 77.4 128 39.1
Ca_22347_v3 Cicer arietinum L. HOM05D007510 ORTHO05D009587 3.2e-12 75.9 41 78.0
Sc16g0002400 Simmondsia chinensis HOM05D007510 ORTHO05D009587 3.2e-12 75.9 55 58.2
Hma1.2p1_0266F.1_g107010 Hydrangea macrophylla HOM05D007510 ORTHO05D009587 4.2e-12 75.5 108 38.9
FAN28G2971 Fragaria x ananassa HOM05D007510 ORTHO05D009587 7.1e-12 74.7 146 36.3
MD02G1136700 Malus domestica HOM05D007510 ORTHO05D000703 9.3e-12 74.3 34 85.3
AUR62007639 Chenopodium quinoa HOM05D007510 ORTHO05D009587 1.2e-11 73.9 116 36.2
Duzib264G0517 Durio zibethinus HOM05D007510 ORTHO05D009587 1.6e-11 73.6 41 78.0
TAR625G1319 Trochodendron aralioides HOM05D007510 ORTHO05D009587 1.6e-11 73.6 38 76.3
Cfa006928 Carpinus fangiana HOM05D007510 ORTHO05D009587 2.1e-11 73.2 140 35.0
Atru.chr3.749 Acer truncatum HOM05D007510 ORTHO05D009587 2.7e-11 72.8 41 75.6
Ah.02g124790 Amaranthus hybridus HOM05D007510 ORTHO05D009587 2.7e-11 72.8 70 50.0
CANSAT01G2887 Cannabis sativa HOM05D007510 ORTHO05D009587 2.7e-11 72.8 147 36.1
Cpa.g.sc6.200 Carica papaya HOM05D007510 ORTHO05D009587 2.7e-11 72.8 33 87.9
Phvul.003G257700 Phaseolus vulgaris HOM05D007510 ORTHO05D009587 3.5e-11 72.4 55 61.8
SHI08591 Sapria himalayana HOM05D007510 ORTHO05D009587 3.5e-11 72.4 53 54.7
CDE04G3692 Ceratophyllum demersum HOM05D001179 ORTHO05D002194 4.6e-11 72.0 101 44.6
Manes.02G175500 Manihot esculenta HOM05D007510 ORTHO05D009587 6.0e-11 71.6 76 51.3
CDE12G0095 Ceratophyllum demersum HOM05D007510 ORTHO05D009587 7.9e-11 71.2 39 76.9
Os09g0530900 Oryza sativa ssp. japonica HOM05D007510 ORTHO05D009587 7.9e-11 71.2 42 66.7
Prupe.7G163800 Prunus persica HOM05D007510 ORTHO05D000703 7.9e-11 71.2 100 43.0
PGR102G2493 Punica granatum HOM05D007510 ORTHO05D009587 7.9e-11 71.2 97 40.2
Thecc.01G024800 Theobroma cacao HOM05D007510 ORTHO05D009587 7.9e-11 71.2 42 71.4
BcaC03g18546 Brassica carinata HOM05D007510 ORTHO05D009587 2.3e-10 69.7 64 59.4
Potri.007G017200 Populus trichocarpa HOM05D007510 ORTHO05D009587 2.3e-10 69.7 107 43.0
Haze_03821 Corylus avellana HOM05D007510 ORTHO05D009587 3.0e-10 69.3 130 35.4
Aqoxy1G00866 Aquilegia oxysepala HOM05D007510 ORTHO05D009587 3.9e-10 68.9 29 89.7
C02p08940 Brassica napus HOM05D007510 ORTHO05D009587 3.9e-10 68.9 43 72.1
BolC2t06803H Brassica oleracea HOM05D007510 ORTHO05D009587 3.9e-10 68.9 43 72.1
HPP92_022284 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.9e-10 68.9 49 59.2
HPP92_022401 Vanilla planifolia HOM05D007510 ORTHO05D009587 3.9e-10 68.9 49 59.2
FvH4_1g12420 Fragaria vesca HOM05D000116 ORTHO05D000703 5.1e-10 68.6 146 32.9
Nn5g29177 Nelumbo nucifera HOM05D007510 ORTHO05D009587 5.1e-10 68.6 63 47.6
SEGI_27269 Sequoiadendron giganteum HOM05D007510 ORTHO05D009587 5.1e-10 68.6 31 83.9
HPP92_028382 Vanilla planifolia HOM05D007510 ORTHO05D009587 5.1e-10 68.6 49 59.2
FAN26G1275 Fragaria x ananassa HOM05D007510 ORTHO05D009587 8.7e-10 67.8 152 33.6
ATR0661G079 Amborella trichopoda HOM05D007510 ORTHO05D009587 1.5e-09 67.0 34 73.5
CARHR195940 Cardamine hirsuta HOM05D007510 ORTHO05D009587 3.3e-09 65.9 29 86.2
Sed0019199 Sechium edule HOM05D007510 ORTHO05D009587 4.3e-09 65.5 31 80.6
Dinv40044 Davidia involucrata HOM05D007510 ORTHO05D009587 9.6e-09 64.3 125 41.6
Zm00001eb319510 Zea mays HOM05D007510 ORTHO05D009587 6.2e-08 61.6 29 75.9
AagrBONN_evm.TU.Sc2ySwM_228.2268 Anthoceros agrestis HOM05D007510 ORTHO05D009587 8.1e-08 61.2 67 41.8
AagrBONN_evm.TU.Sc2ySwM_368.2258 Anthoceros agrestis HOM05D007510 ORTHO05D009587 8.1e-08 61.2 78 38.5
Sc03g0003350 Simmondsia chinensis HOM05D007510 ORTHO05D009587 8.1e-08 61.2 34 73.5
EL10As8g23866 Beta vulgaris HOM05D007510 ORTHO05D009587 1.1e-07 60.8 33 69.7
Mapoly0025s0056 Marchantia polymorpha HOM05D007510 ORTHO05D009587 4.0e-07 58.9 148 27.7
Pp3c10_3490 Physcomitrium patens HOM05D007510 ORTHO05D009587 7.6e-06 54.7 48 45.8


User provided reference genes

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