Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 6.3e-114 414.1 203 100.0
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 8.9e-68 260.8 201 67.2
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 3.7e-66 255.4 189 66.7
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 5.2e-60 235.0 196 58.2
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 5.2e-60 235.0 195 59.5
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.2e-59 233.8 193 60.1
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.2e-59 233.8 193 60.1
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 2.6e-59 232.6 204 56.9
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 6.4e-58 228.0 193 58.5
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 2.4e-57 226.1 193 58.5
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 1.6e-53 213.4 181 56.9
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 8.1e-53 211.1 191 55.0
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 1.1e-52 210.7 194 56.2
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 5.3e-52 208.4 195 53.3
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 2.0e-51 206.5 198 51.5
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 2.6e-51 206.1 194 56.2
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 4.4e-51 205.3 185 54.6
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 9.9e-51 204.1 201 53.2
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 1.3e-50 203.8 193 52.3
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 2.9e-50 202.6 198 51.0
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 4.9e-50 201.8 187 58.3
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 6.4e-50 201.4 190 51.1
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 8.4e-50 201.1 199 51.8
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 3.2e-49 199.1 187 57.2
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 3.2e-49 199.1 199 52.3
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 7.1e-49 198.0 187 56.1
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 2.1e-48 196.4 187 56.7
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 2.7e-48 196.1 184 57.1
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 3.5e-48 195.7 204 52.9
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 4.6e-48 195.3 193 52.3
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 7.9e-48 194.5 186 53.8
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 7.9e-48 194.5 201 51.2
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 2.3e-47 193.0 199 50.8
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 2.3e-47 193.0 188 50.5
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 3.0e-47 192.6 192 54.7
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 6.6e-47 191.4 188 53.7
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 1.5e-46 190.3 196 50.5
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 1.5e-46 190.3 186 51.6
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 2.5e-46 189.5 198 49.0
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.5e-46 189.5 196 50.5
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 3.3e-46 189.1 198 48.5
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 4.3e-46 188.7 185 54.6
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 5.6e-46 188.3 186 54.8
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 2.1e-45 186.4 191 51.3
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 3.6e-45 185.7 187 52.4
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 3.6e-45 185.7 187 51.9
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 3.6e-45 185.7 186 54.3
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 3.6e-45 185.7 189 52.4
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 6.2e-45 184.9 198 47.0
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.1e-44 184.1 196 50.0
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 1.8e-44 183.3 199 49.2
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 3.1e-44 182.6 189 51.9
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 3.1e-44 182.6 181 49.2
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 4.0e-44 182.2 164 57.9
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 4.0e-44 182.2 187 51.3
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 6.9e-44 181.4 186 51.6
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 6.9e-44 181.4 191 53.4
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 1.5e-43 180.3 195 47.2
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 3.4e-43 179.1 189 49.2
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 4.5e-43 178.7 198 46.0
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 7.6e-43 177.9 184 51.6
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 9.9e-43 177.6 190 46.8
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 1.7e-42 176.8 193 46.1
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 2.2e-42 176.4 188 54.3
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 4.9e-42 175.3 181 53.6
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 4.9e-42 175.3 196 48.0
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 8.4e-42 174.5 196 47.4
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 1.9e-41 173.3 168 54.2
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 4.2e-41 172.2 186 49.5
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 7.1e-41 171.4 199 45.2
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 1.2e-40 170.6 176 50.6
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 2.8e-37 159.5 176 47.2
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 2.6e-35 152.9 188 46.8
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 2.2e-34 149.8 185 45.4
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 1.0e-31 141.0 242 36.4
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 1.5e-30 137.1 221 38.0
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 7.4e-30 134.8 184 42.9
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 1.3e-29 134.0 198 38.9
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 4.1e-28 129.0 182 40.1
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.3e-23 113.2 170 39.4
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 8.7e-23 111.3 172 41.9
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.5e-22 109.8 179 39.1
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.4e-20 103.2 171 39.2
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.3e-20 102.1 170 39.4
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 6.9e-20 101.7 126 42.9
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 2.6e-19 99.8 185 33.0
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.4e-19 99.4 172 37.2
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 5.9e-19 98.6 84 54.8
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.3e-18 97.4 176 36.4
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.7e-18 97.1 175 37.1
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.9e-18 96.3 182 36.3
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 5.5e-17 92.0 94 52.1
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 2.7e-16 89.7 186 31.7
PGSC0003DMG400003669 Solanum tuberosum HOM05D007512 ORTHO05D009524 2.7e-16 89.7 61 75.4
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 7.9e-16 88.2 172 33.1
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 4.1e-12 75.9 164 31.7
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 7.7e-11 71.6 70 50.0
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-10 70.9 112 38.4
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 3.2e-09 66.2 165 31.5
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.5e-06 57.4 109 35.8
Duzib177G0331 Durio zibethinus HOM05D000125 ORTHO05D020513 4.4e-06 55.8 128 32.0


User provided reference genes

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