Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G354.55 Capsicum annuum HOM05D007707 ORTHO05D009711 3.1e-44 181.4 92 100.0
Nitab4.5_0001685g0100 Nicotiana tabacum HOM05D007707 ORTHO05D009711 7.2e-33 143.7 87 81.6
Sopen03g006140 Solanum pennellii HOM05D007707 ORTHO05D009711 7.2e-33 143.7 82 85.4
Solyc03g033370.3 Solanum lycopersicum HOM05D007707 ORTHO05D009711 6.7e-31 137.1 82 81.7
Peaxi162Scf00635g00914 Petunia axillaris HOM05D007707 ORTHO05D009711 1.2e-30 136.3 87 80.5
Nitab4.5_0001561g0120 Nicotiana tabacum HOM05D007707 ORTHO05D009711 2.4e-28 128.6 83 80.7
Cc07_g11150 Coffea canephora HOM05D007707 ORTHO05D009711 5.0e-26 120.9 95 65.3
Dinv08562 Davidia involucrata HOM05D007707 ORTHO05D009711 2.3e-23 112.1 92 63.0
DCAR_011610 Daucus carota HOM05D007707 ORTHO05D009711 1.5e-22 109.4 85 63.5
Oeu056393.1 Olea europaea HOM05D007707 ORTHO05D009711 2.6e-22 108.6 88 60.2
Sc16g0001900 Simmondsia chinensis HOM05D007707 ORTHO05D009711 7.5e-22 107.1 84 61.9
Hma1.2p1_0869F.1_g230620 Hydrangea macrophylla HOM05D007707 ORTHO05D009711 2.2e-21 105.5 73 72.6
Migut.J01748 Erythranthe guttata HOM05D007707 ORTHO05D009711 3.7e-21 104.8 90 61.1
TWI73G0967 Tripterygium wilfordii HOM05D007707 ORTHO05D009711 1.1e-20 103.2 81 64.2
vmacro22198 Vaccinium macrocarpon HOM05D007707 ORTHO05D009711 1.8e-20 102.4 79 64.6
Manes.01G149600 Manihot esculenta HOM05D007707 ORTHO05D009711 2.4e-20 102.1 85 64.7
MD15G1241100 Malus domestica HOM05D007707 ORTHO05D009711 3.1e-20 101.7 93 57.0
QL06p051322 Quercus lobata HOM05D007707 ORTHO05D009711 3.1e-20 101.7 85 64.7
SGA_v2.0_scaffold36G14291 Striga asiatica HOM05D007707 ORTHO05D009711 3.1e-20 101.7 73 68.5
THA.LOC104804277 Tarenaya hassleriana HOM05D007707 ORTHO05D009711 5.4e-20 100.9 76 68.4
CARHR244300 Cardamine hirsuta HOM05D007707 ORTHO05D009711 1.2e-19 99.8 73 68.5
Cfa007014 Carpinus fangiana HOM05D007707 ORTHO05D009711 2.7e-19 98.6 68 69.1
CiPaw.07G061600 Carya illinoinensis HOM05D007707 ORTHO05D009711 2.7e-19 98.6 81 63.0
Haze_03717 Corylus avellana HOM05D007707 ORTHO05D009711 3.5e-19 98.2 85 61.2
ClCG01G020510 Citrullus lanatus HOM05D007707 ORTHO05D009711 4.5e-19 97.8 82 57.3
RcHm_v2.0_Chr2g0098761 Rosa chinensis HOM05D007707 ORTHO05D009711 4.5e-19 97.8 89 59.6
MELO3C007931.2 Cucumis melo HOM05D007707 ORTHO05D009711 5.9e-19 97.4 82 59.8
FAN19G0536 Fragaria x ananassa HOM05D007707 ORTHO05D009711 5.9e-19 97.4 75 66.7
Rhsim10G0207600 Rhododendron simsii HOM05D007707 ORTHO05D009711 5.9e-19 97.4 79 60.8
AL7G15140 Arabidopsis lyrata HOM05D007707 ORTHO05D009711 7.7e-19 97.1 71 67.6
AT4G35905 Arabidopsis thaliana HOM05D007707 ORTHO05D009711 7.7e-19 97.1 71 67.6
Carub.0007s0432 Capsella rubella HOM05D007707 ORTHO05D009711 7.7e-19 97.1 71 67.6
Gohir.A11G173000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 7.7e-19 97.1 81 59.3
BolC7t46567H Brassica oleracea HOM05D007707 ORTHO05D009711 1.0e-18 96.7 71 66.2
ECA246G5216 Erigeron canadensis HOM05D007707 ORTHO05D009711 1.0e-18 96.7 57 77.2
Thhalv10026722m.g Eutrema salsugineum HOM05D007707 ORTHO05D009711 1.0e-18 96.7 69 68.1
MBI08_g05062_MAGBIO Magnolia biondii HOM05D007707 ORTHO05D009711 1.0e-18 96.7 92 52.2
Ciclev10026827m.g Citrus clementina HOM05D007707 ORTHO05D009711 1.3e-18 96.3 80 61.2
Aa31LG6G12850 Aethionema arabicum HOM05D007707 ORTHO05D009711 1.7e-18 95.9 71 66.2
Gohir.D11G180000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 1.7e-18 95.9 81 58.0
Gorai.007G191900 Gossypium raimondii HOM05D007707 ORTHO05D009711 1.7e-18 95.9 81 58.0
Sp7g33690 Schrenkiella parvula HOM05D007707 ORTHO05D009711 1.7e-18 95.9 71 66.2
Ah.02g123290 Amaranthus hybridus HOM05D007707 ORTHO05D009711 2.9e-18 95.1 78 60.3
A03p63940 Brassica napus HOM05D007707 ORTHO05D009711 2.9e-18 95.1 71 64.8
BraA03t15463Z Brassica rapa HOM05D007707 ORTHO05D009711 2.9e-18 95.1 71 64.8
AUR62018017 Chenopodium quinoa HOM05D007707 ORTHO05D009711 2.9e-18 95.1 82 58.5
Prupe.7G172900 Prunus persica HOM05D007707 ORTHO05D009711 2.9e-18 95.1 95 54.7
Sed0012149 Sechium edule HOM05D007707 ORTHO05D009711 2.9e-18 95.1 82 61.0
EL10Ac6g15163 Beta vulgaris HOM05D007707 ORTHO05D009711 5.0e-18 94.4 82 57.3
CsaV3_6G047390 Cucumis sativus L. HOM05D007707 ORTHO05D009711 5.0e-18 94.4 82 58.5
FAN23G0755 Fragaria x ananassa HOM05D007707 ORTHO05D009711 5.0e-18 94.4 75 65.3
Thecc.01G013500 Theobroma cacao HOM05D007707 ORTHO05D009711 6.5e-18 94.0 81 61.7
FAN28G2511 Fragaria x ananassa HOM05D007707 ORTHO05D009711 3.2e-17 91.7 57 73.7
Nn6g31960 Nelumbo nucifera HOM05D007707 ORTHO05D009711 3.2e-17 91.7 94 52.1
PGSC0003DMG400022552 Solanum tuberosum HOM05D007707 ORTHO05D009711 4.2e-17 91.3 49 87.8
CANSAT01G1439 Cannabis sativa HOM05D007707 ORTHO05D009711 9.5e-17 90.1 69 63.8
COL.COLO4_22472 Corchorus olitorius HOM05D007707 ORTHO05D009711 1.6e-16 89.4 71 63.4
Duzib147G0406 Durio zibethinus HOM05D007707 ORTHO05D009711 1.6e-16 89.4 72 61.1
Pp3c14_18830 Physcomitrium patens HOM05D007707 ORTHO05D009711 1.6e-16 89.4 66 59.1
Glyma.11G079800 Glycine max HOM05D007707 ORTHO05D009711 2.1e-16 89.0 76 57.9
Lsat_1_v5_gn_3_71080 Lactuca sativa HOM05D007707 ORTHO05D009711 2.8e-16 88.6 64 70.3
CDE05G2854 Ceratophyllum demersum HOM05D007707 ORTHO05D009711 6.1e-16 87.4 89 52.8
Lj2g0020635 Lotus japonicus HOM05D007707 ORTHO05D009711 8.0e-16 87.0 92 48.9
PGR102G1942 Punica granatum HOM05D007707 ORTHO05D009711 8.0e-16 87.0 80 56.2
Glyma.01G163700 Glycine max HOM05D007707 ORTHO05D009711 1.8e-15 85.9 78 52.6
ATR0180G024 Amborella trichopoda HOM05D007707 ORTHO05D009711 3.0e-15 85.1 75 56.0
Psat2g152640 Pisum sativum HOM05D007707 ORTHO05D009711 3.0e-15 85.1 78 59.0
Phvul.002G105900 Phaseolus vulgaris HOM05D007707 ORTHO05D009711 4.0e-15 84.7 64 60.9
TPR.G10525 Trifolium pratense HOM05D007707 ORTHO05D009711 5.2e-15 84.3 77 55.8
arahy.Tifrunner.gnm1.ann1.LEB2TA Arachis hypogaea HOM05D007707 ORTHO05D009711 6.8e-15 84.0 64 62.5
arahy.Tifrunner.gnm1.ann1.URRP40 Arachis hypogaea HOM05D007707 ORTHO05D009711 6.8e-15 84.0 64 62.5
Medtr5g022760 Medicago truncatula HOM05D007707 ORTHO05D009711 1.2e-14 83.2 79 54.4
Lalb_Chr09g0321541 Lupinus albus HOM05D007707 ORTHO05D009711 2.6e-14 82.0 69 63.8
Os10g0438700 Oryza sativa ssp. japonica HOM05D007707 ORTHO05D009711 2.6e-14 82.0 63 58.7
Actinidia22948 Actinidia chinensis HOM05D007707 ORTHO05D009711 1.7e-13 79.3 56 71.4
Sabra15G0015600 Salix brachista HOM05D007707 ORTHO05D009711 1.7e-13 79.3 59 62.7
BcaNung05054 Brassica carinata HOM05D007707 ORTHO05D009711 3.7e-13 78.2 72 56.9
SalBow2G3201 Salvia bowleyana HOM05D007707 ORTHO05D009711 3.1e-12 75.1 45 75.6
SEGI_22054 Sequoiadendron giganteum HOM05D007707 ORTHO05D009711 3.1e-12 75.1 69 46.4
GSVIVG01006523001 Vitis vinifera HOM05D007707 ORTHO05D009711 1.2e-11 73.2 53 66.0
Zm00001eb222710 Zea mays HOM05D007707 ORTHO05D009711 1.2e-11 73.2 74 48.6
arahy.Tifrunner.gnm1.ann1.04LXIS Arachis hypogaea HOM05D000001 ORTHO05D009700 2.9e-10 68.6 57 59.6
FvH4_1g11290 Fragaria vesca HOM05D007707 ORTHO05D009711 3.8e-10 68.2 39 76.9
Eucgr.J02480 Eucalyptus grandis HOM05D007707 ORTHO05D009711 8.6e-10 67.0 39 76.9
Mapoly0124s0029 Marchantia polymorpha HOM05D007707 ORTHO05D009711 8.6e-10 67.0 51 56.9
Hund14067 Selenicereus undatus HOM05D007707 ORTHO05D009711 3.3e-09 65.1 52 61.5
C07p61410 Brassica napus HOM05D007707 ORTHO05D009711 2.8e-08 62.0 37 75.7
CSS0044701 Camellia sinensis var. sinensis HOM05D007707 ORTHO05D009711 3.6e-08 61.6 46 60.9
HanXRQChr09g0245181 Helianthus annuus HOM05D007707 ORTHO05D009711 1.0e-07 60.1 37 73.0
Oeu060284.1 Olea europaea HOM05D007707 ORTHO05D009711 2.3e-07 58.9 82 46.3
HPP92_020736 Vanilla planifolia HOM05D007707 ORTHO05D009711 8.9e-07 57.0 51 52.9


User provided reference genes

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