Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G354.16 Capsicum annuum HOM05D000361 ORTHO05D017720 3.1e-66 255.0 130 100.0
Sopen11g017320 Solanum pennellii HOM05D000361 ORTHO05D007482 5.1e-32 141.4 124 64.5
PGSC0003DMG400002190 Solanum tuberosum HOM05D000361 ORTHO05D007482 5.1e-32 141.4 124 64.5
Peaxi162Scf01167g00115 Petunia axillaris HOM05D000361 ORTHO05D007482 1.5e-31 139.8 124 62.9
Solyc11g040120.3 Solanum lycopersicum HOM05D000361 ORTHO05D007482 1.5e-31 139.8 124 63.7
Nitab4.5_0005286g0020 Nicotiana tabacum HOM05D000361 ORTHO05D007482 2.5e-31 139.0 124 62.9
CAN.G624.12 Capsicum annuum HOM05D000361 ORTHO05D007482 5.6e-31 137.9 124 62.9
Cc11_g14860 Coffea canephora HOM05D000361 ORTHO05D007482 8.9e-29 130.6 124 58.9
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 8.9e-29 130.6 120 60.8
QL03p048338 Quercus lobata HOM05D000361 ORTHO05D007482 1.5e-28 129.8 124 58.1
MBI11_g23193_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D007482 8.3e-27 124.0 124 57.3
Glyma.07G238400 Glycine max HOM05D000361 ORTHO05D007482 1.1e-26 123.6 124 57.3
Nn4g22072 Nelumbo nucifera HOM05D000361 ORTHO05D007482 3.2e-26 122.1 124 56.5
Phvul.003G116100 Phaseolus vulgaris HOM05D000361 ORTHO05D007482 4.1e-26 121.7 123 56.1
VMungo1215G2015 Vigna mungo HOM05D000361 ORTHO05D007482 4.1e-26 121.7 124 55.6
arahy.Tifrunner.gnm1.ann1.D87PD7 Arachis hypogaea HOM05D000361 ORTHO05D007482 5.4e-26 121.3 124 57.3
arahy.Tifrunner.gnm1.ann1.WNQC8Q Arachis hypogaea HOM05D000361 ORTHO05D007482 5.4e-26 121.3 124 57.3
Haze_12528 Corylus avellana HOM05D000361 ORTHO05D007482 5.4e-26 121.3 124 56.5
Duzib160G0854 Durio zibethinus HOM05D000361 ORTHO05D007482 5.4e-26 121.3 124 54.0
MD13G1134100 Malus domestica HOM05D000361 ORTHO05D007482 7.1e-26 120.9 124 54.8
MD16G1144700 Malus domestica HOM05D000361 ORTHO05D007482 7.1e-26 120.9 124 54.8
Cfa009472 Carpinus fangiana HOM05D002839 ORTHO05D007482 9.2e-26 120.6 124 55.6
Glyma.17G035000 Glycine max HOM05D000361 ORTHO05D007482 9.2e-26 120.6 124 56.5
Migut.K01134 Erythranthe guttata HOM05D000361 ORTHO05D007482 1.2e-25 120.2 124 56.5
ClCG10G013030 Citrullus lanatus HOM05D000361 ORTHO05D007482 1.6e-25 119.8 124 55.6
Lsat_1_v5_gn_3_33321 Lactuca sativa HOM05D000361 ORTHO05D007482 1.6e-25 119.8 124 57.3
TPR.G25402 Trifolium pratense HOM05D000361 ORTHO05D007482 1.6e-25 119.8 121 57.9
CDE05G0767 Ceratophyllum demersum HOM05D000361 ORTHO05D007482 2.7e-25 119.0 124 56.5
GSVIVG01001119001 Vitis vinifera HOM05D000361 ORTHO05D007482 2.7e-25 119.0 124 54.8
Actinidia30574 Actinidia chinensis HOM05D000361 ORTHO05D007482 3.5e-25 118.6 124 55.6
CiPaw.06G111400 Carya illinoinensis HOM05D000361 ORTHO05D007482 3.5e-25 118.6 124 54.0
Gohir.A09G002700 Gossypium hirsutum HOM05D000361 ORTHO05D007482 3.5e-25 118.6 124 53.2
Oeu010265.1 Olea europaea HOM05D000361 ORTHO05D007482 3.5e-25 118.6 124 54.8
Prupe.1G211500 Prunus persica HOM05D000361 ORTHO05D007482 3.5e-25 118.6 122 58.2
MSTRG.8063 Avicennia marina HOM05D000361 ORTHO05D007482 4.6e-25 118.2 124 54.8
Eucgr.B03569 Eucalyptus grandis HOM05D000361 ORTHO05D007482 4.6e-25 118.2 124 54.8
Gohir.D09G002500 Gossypium hirsutum HOM05D000361 ORTHO05D007482 4.6e-25 118.2 124 53.2
Gorai.006G003100 Gossypium raimondii HOM05D000361 ORTHO05D007482 4.6e-25 118.2 124 53.2
Psat0s4013g0080 Pisum sativum HOM05D000361 ORTHO05D007482 4.6e-25 118.2 121 57.0
FvH4_4g22180 Fragaria vesca HOM05D000361 ORTHO05D007482 6.0e-25 117.9 124 54.8
FAN12G2733 Fragaria x ananassa HOM05D000361 ORTHO05D007482 6.0e-25 117.9 128 53.9
FAN17G1841 Fragaria x ananassa HOM05D000361 ORTHO05D007482 6.0e-25 117.9 124 54.8
Lj4g0014568 Lotus japonicus HOM05D000361 ORTHO05D007482 6.0e-25 117.9 123 57.7
Manes.08G099300 Manihot esculenta HOM05D000361 ORTHO05D007482 6.0e-25 117.9 125 53.6
CANSAT21G0886 Cannabis sativa HOM05D000361 ORTHO05D007482 7.8e-25 117.5 124 53.2
Sabra01G0049500 Salix brachista HOM05D000361 ORTHO05D007482 7.8e-25 117.5 124 51.6
SalBow2G1437 Salvia bowleyana HOM05D000361 ORTHO05D007482 7.8e-25 117.5 124 54.0
PGR102G2757 Punica granatum HOM05D000361 ORTHO05D007482 1.0e-24 117.1 124 55.6
TAR629G3206 Trochodendron aralioides HOM05D000361 ORTHO05D007482 1.0e-24 117.1 124 54.0
CsaV3_3G032880 Cucumis sativus L. HOM05D000361 ORTHO05D007482 1.3e-24 116.7 124 54.8
Sed0006329 Sechium edule HOM05D000361 ORTHO05D007482 1.3e-24 116.7 124 54.0
MELO3C026749.2 Cucumis melo HOM05D000361 ORTHO05D007482 1.7e-24 116.3 124 54.8
AUR62034021 Chenopodium quinoa HOM05D000361 ORTHO05D007482 3.0e-24 115.5 125 54.4
Hma1.2p1_0738F.1_g210950 Hydrangea macrophylla HOM05D000361 ORTHO05D007482 3.0e-24 115.5 124 52.4
RcHm_v2.0_Chr4g0428411 Rosa chinensis HOM05D000361 ORTHO05D007482 3.0e-24 115.5 124 54.0
Sc10g0009070 Simmondsia chinensis HOM05D000361 ORTHO05D007482 3.0e-24 115.5 125 57.6
Gohir.A03G086700 Gossypium hirsutum HOM05D000361 ORTHO05D007482 3.9e-24 115.2 124 51.6
Potri.001G070500 Populus trichocarpa HOM05D000361 ORTHO05D007482 3.9e-24 115.2 124 50.8
vmacro15518 Vaccinium macrocarpon HOM05D000361 ORTHO05D007482 3.9e-24 115.2 124 52.4
Gohir.D02G106100 Gossypium hirsutum HOM05D000361 ORTHO05D007482 5.1e-24 114.8 124 50.0
Gorai.005G120400 Gossypium raimondii HOM05D000361 ORTHO05D007482 5.1e-24 114.8 124 51.6
Lj3A1078T19 Lonicera japonica HOM05D000361 ORTHO05D007482 5.1e-24 114.8 124 56.5
CSS0019126 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D007482 6.6e-24 114.4 124 53.2
CSS0044557 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D007482 6.6e-24 114.4 124 53.2
HanXRQChr06g0175361 Helianthus annuus HOM05D000361 ORTHO05D007482 6.6e-24 114.4 124 54.8
Medtr4g122270 Medicago truncatula HOM05D000361 ORTHO05D007482 6.6e-24 114.4 121 57.9
Hund06727 Selenicereus undatus HOM05D000361 ORTHO05D007482 1.1e-23 113.6 124 54.8
AUR62042521 Chenopodium quinoa HOM05D000361 ORTHO05D007482 1.5e-23 113.2 125 52.8
Ah.14g085960 Amaranthus hybridus HOM05D000361 ORTHO05D007482 2.5e-23 112.5 124 54.8
Cpa.g.sc1761.2 Carica papaya HOM05D000361 ORTHO05D007482 2.5e-23 112.5 124 53.2
ECA246G5349 Erigeron canadensis HOM05D000361 ORTHO05D007482 3.3e-23 112.1 124 52.4
Lalb_Chr17g0344991 Lupinus albus HOM05D000361 ORTHO05D007482 3.3e-23 112.1 121 57.0
Rhsim13G0167000 Rhododendron simsii HOM05D000361 ORTHO05D007482 3.3e-23 112.1 124 52.4
TWI18G1079 Tripterygium wilfordii HOM05D000361 ORTHO05D007482 3.3e-23 112.1 124 50.8
PSO017G0122 Papaver somniferum HOM05D000361 ORTHO05D007482 4.3e-23 111.7 124 53.2
PSO478G1108 Papaver somniferum HOM05D000361 ORTHO05D007482 4.3e-23 111.7 124 53.2
Thecc.01G239700 Theobroma cacao HOM05D000361 ORTHO05D007482 4.3e-23 111.7 122 52.5
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 5.6e-23 111.3 123 55.3
Ca_21434_v3 Cicer arietinum L. HOM05D000361 ORTHO05D007482 7.3e-23 110.9 121 54.5
EL10Ac8g19503 Beta vulgaris HOM05D000361 ORTHO05D007482 1.2e-22 110.2 123 53.7
Atru.chr12.1475 Acer truncatum HOM05D000361 ORTHO05D007482 2.1e-22 109.4 121 53.7
Os11g0484300 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D007482 2.8e-22 109.0 124 50.8
SGA_v2.0_scaffold258G45751 Striga asiatica HOM05D000361 ORTHO05D007482 2.8e-22 109.0 124 54.8
Zm00001eb169610 Zea mays HOM05D000361 ORTHO05D007482 2.8e-22 109.0 124 50.8
Ciclev10027769m.g Citrus clementina HOM05D000361 ORTHO05D007482 3.6e-22 108.6 124 52.4
SGA_v2.0_scaffold258G45762 Striga asiatica HOM05D000361 ORTHO05D007482 8.1e-22 107.5 124 50.8
Aqoxy5G02979 Aquilegia oxysepala HOM05D000361 ORTHO05D007482 2.4e-21 105.9 124 51.6
HPP92_023046 Vanilla planifolia HOM05D000361 ORTHO05D007482 4.0e-21 105.1 124 51.6
HPP92_023097 Vanilla planifolia HOM05D000361 ORTHO05D007482 4.0e-21 105.1 124 51.6
CSS0035266 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D017720 5.2e-21 104.8 117 53.8
ATR0582G147 Amborella trichopoda HOM05D000361 ORTHO05D007482 1.5e-20 103.2 126 51.6
CSS0044205 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D017720 2.6e-20 102.4 124 48.4
Mapoly0007s0014 Marchantia polymorpha HOM05D000361 ORTHO05D007482 3.4e-20 102.1 118 54.2
Glyma.07G238475 Glycine max HOM05D000361 ORTHO05D017720 2.2e-19 99.4 115 51.3
SHI04104 Sapria himalayana HOM05D000361 ORTHO05D007482 3.8e-19 98.6 122 48.4
BcaB04g17580 Brassica carinata HOM05D000361 ORTHO05D007482 9.2e-18 94.0 121 48.8
A10p07200 Brassica napus HOM05D000361 ORTHO05D007482 9.2e-18 94.0 121 48.8
BraSC36t46098Z Brassica rapa HOM05D000361 ORTHO05D007482 9.2e-18 94.0 121 48.8
Thhalv10011214m.g Eutrema salsugineum HOM05D000361 ORTHO05D007482 2.1e-17 92.8 121 47.9
SMO340G0145 Selaginella moellendorffii HOM05D000361 ORTHO05D007482 2.7e-17 92.4 118 49.2
THA.LOC104801409 Tarenaya hassleriana HOM05D000361 ORTHO05D007482 2.7e-17 92.4 119 45.4
BcaC08g42885 Brassica carinata HOM05D000361 ORTHO05D007482 3.5e-17 92.0 121 47.9
C06p01030 Brassica napus HOM05D000361 ORTHO05D007482 3.5e-17 92.0 121 47.9
BolC6t35239H Brassica oleracea HOM05D000361 ORTHO05D007482 3.5e-17 92.0 121 47.9
Sp1g33770 Schrenkiella parvula HOM05D000361 ORTHO05D007482 3.5e-17 92.0 121 47.9
AL1G52570 Arabidopsis lyrata HOM05D000361 ORTHO05D007482 4.6e-17 91.7 121 47.9
BcaB07g33912 Brassica carinata HOM05D000361 ORTHO05D007482 4.6e-17 91.7 120 47.5
BraA08t32632Z Brassica rapa HOM05D000361 ORTHO05D007482 4.6e-17 91.7 121 47.9
Carub.0001s3540 Capsella rubella HOM05D000361 ORTHO05D007482 4.6e-17 91.7 121 47.9
BcaC07g37281 Brassica carinata HOM05D000361 ORTHO05D007482 6.0e-17 91.3 121 47.9
C08p07110 Brassica napus HOM05D000361 ORTHO05D007482 6.0e-17 91.3 121 47.9
BolC8t47556H Brassica oleracea HOM05D000361 ORTHO05D007482 6.0e-17 91.3 121 47.9
Aa31LG3G14210 Aethionema arabicum HOM05D000361 ORTHO05D007482 7.8e-17 90.9 124 42.7
AT1G44900 Arabidopsis thaliana HOM05D000361 ORTHO05D007482 1.3e-16 90.1 121 47.1
A08p06290 Brassica napus HOM05D000361 ORTHO05D007482 1.3e-16 90.1 121 47.1
CARHR036120 Cardamine hirsuta HOM05D000361 ORTHO05D007482 1.5e-15 86.7 121 45.5
Pp3c1_34820 Physcomitrium patens HOM05D000361 ORTHO05D007482 2.5e-15 85.9 118 48.3
MBI02_g44365_MAGBIO Magnolia biondii HOM05D000449 ORTHO05D017720 1.3e-14 83.6 84 57.1
Dinv06935 Davidia involucrata HOM05D000361 ORTHO05D007482 1.4e-13 80.1 115 50.4
DCAR_026439 Daucus carota HOM05D000361 ORTHO05D007482 4.0e-13 78.6 87 54.0
PRCOL_00001965 Prasinoderma coloniale HOM05D000361 ORTHO05D007482 5.3e-13 78.2 122 40.2
Rhsim08G0136200 Rhododendron simsii HOM05D000361 ORTHO05D036593 9.0e-13 77.4 114 45.6
CAN.G392.6 Capsicum annuum HOM05D000002 ORTHO05D018872 2.6e-12 75.9 78 52.6
Lsat_1_v5_gn_5_90520 Lactuca sativa HOM05D000361 ORTHO05D017720 9.9e-12 73.9 87 48.3
MCO02G357 Micromonas commoda HOM05D000361 ORTHO05D007482 2.1e-09 66.2 124 37.1
Cre07.g338000 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D007482 2.7e-09 65.9 127 37.0
MBI06_g16559_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D017720 1.9e-07 59.7 48 64.6


User provided reference genes

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