Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 9.9e-101 370.2 193 100.0
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 6.4e-92 340.9 193 91.2
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 2.7e-90 335.5 193 90.2
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 3.3e-88 328.6 193 89.1
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 6.2e-87 324.3 195 89.7
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.7e-84 316.2 195 90.3
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 5.3e-78 294.7 195 84.6
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 7.9e-66 254.2 198 74.7
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 3.9e-65 251.9 198 73.7
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 2.0e-64 249.6 197 72.6
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 1.8e-62 243.0 199 72.9
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 1.8e-62 243.0 202 72.8
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.1e-59 233.8 197 69.5
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 4.2e-59 231.9 198 69.7
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 4.2e-59 231.9 180 75.0
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 1.2e-58 230.3 200 68.5
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.6e-58 229.9 195 67.7
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 2.1e-58 229.6 194 68.6
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 2.1e-58 229.6 197 69.0
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 6.1e-58 228.0 195 66.7
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 8.0e-58 227.6 200 68.5
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.4e-57 226.9 196 65.8
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 2.3e-57 226.1 195 66.2
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 2.3e-57 226.1 193 65.8
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 3.9e-57 225.3 194 67.5
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 5.2e-57 224.9 198 67.2
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 6.7e-57 224.6 172 73.8
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 6.7e-57 224.6 197 65.5
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 8.8e-57 224.2 204 68.1
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 1.1e-56 223.8 193 66.8
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 1.5e-56 223.4 198 66.2
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 2.6e-56 222.6 197 65.5
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.6e-56 222.6 181 71.8
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 3.3e-56 222.2 196 65.3
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 5.7e-56 221.5 194 65.5
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 5.7e-56 221.5 197 66.5
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 9.7e-56 220.7 199 66.8
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.7e-55 219.9 164 74.4
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 1.7e-55 219.9 196 65.3
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 1.7e-55 219.9 201 65.2
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 2.2e-55 219.5 197 66.0
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 2.2e-55 219.5 197 66.0
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 3.7e-55 218.8 166 73.5
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 3.7e-55 218.8 198 67.2
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 4.8e-55 218.4 198 67.2
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 4.8e-55 218.4 197 65.0
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 6.3e-55 218.0 191 67.0
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 1.1e-54 217.2 196 67.3
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 1.1e-54 217.2 196 67.3
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 1.4e-54 216.9 197 64.0
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 1.8e-54 216.5 141 83.0
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 1.8e-54 216.5 176 68.8
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 4.1e-54 215.3 142 78.2
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 5.3e-54 214.9 193 65.8
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 7.0e-54 214.5 137 80.3
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 7.0e-54 214.5 137 82.5
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 7.0e-54 214.5 196 65.3
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 1.2e-53 213.8 153 78.4
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 2.6e-53 212.6 143 79.7
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 2.6e-53 212.6 170 71.2
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 2.6e-53 212.6 188 64.4
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 3.5e-53 212.2 194 63.9
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 3.5e-53 212.2 137 79.6
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 4.5e-53 211.8 173 71.1
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 4.5e-53 211.8 139 79.9
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 4.5e-53 211.8 138 80.4
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 5.9e-53 211.5 138 80.4
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 7.7e-53 211.1 194 66.5
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 7.7e-53 211.1 140 80.7
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 1.0e-52 210.7 196 64.8
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 1.0e-52 210.7 162 73.5
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 1.3e-52 210.3 138 80.4
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 1.7e-52 209.9 140 80.0
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 1.7e-52 209.9 176 67.0
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 2.2e-52 209.5 137 82.5
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 2.9e-52 209.1 195 64.1
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 3.8e-52 208.8 140 80.0
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 5.0e-52 208.4 193 63.7
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 5.0e-52 208.4 140 79.3
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 8.5e-52 207.6 177 64.4
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 2.5e-51 206.1 168 70.2
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 2.5e-51 206.1 193 61.1
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 3.2e-51 205.7 183 64.5
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 4.2e-51 205.3 152 73.7
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 4.2e-51 205.3 196 63.3
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 4.2e-51 205.3 196 63.3
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 4.2e-51 205.3 139 79.1
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 4.2e-51 205.3 139 79.1
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 4.2e-51 205.3 139 79.1
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 5.5e-51 204.9 161 70.8
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 9.4e-51 204.1 173 68.2
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 9.4e-51 204.1 197 61.9
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 9.4e-51 204.1 170 70.0
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 9.4e-51 204.1 194 61.3
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 1.6e-50 203.4 194 62.4
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 2.1e-50 203.0 145 77.9
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 2.1e-50 203.0 145 77.9
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 2.1e-50 203.0 145 77.9
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 2.1e-50 203.0 145 77.9
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 2.1e-50 203.0 197 63.5
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 2.7e-50 202.6 138 79.0
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 2.7e-50 202.6 194 62.4
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 2.7e-50 202.6 180 66.7
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 2.7e-50 202.6 169 67.5
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 3.6e-50 202.2 144 76.4
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 4.7e-50 201.8 198 61.1
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 1.0e-49 200.7 148 73.6
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 1.4e-49 200.3 182 64.8
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.4e-49 200.3 196 62.8
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 1.8e-49 199.9 173 66.5
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 2.3e-49 199.5 167 67.1
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 3.0e-49 199.1 172 68.0
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 6.8e-49 198.0 177 65.5
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 8.8e-49 197.6 171 66.1
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 1.5e-48 196.8 191 62.8
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 1.5e-48 196.8 197 60.9
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 4.4e-48 195.3 191 62.3
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 4.4e-48 195.3 145 75.9
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 1.3e-47 193.7 140 75.7
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 1.7e-47 193.4 149 73.8
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 8.3e-47 191.0 115 87.0
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 1.1e-46 190.7 110 90.0
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 1.1e-46 190.7 189 61.4
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 5.3e-46 188.3 138 74.6
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 5.3e-46 188.3 115 86.1
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 5.3e-46 188.3 115 86.1
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 9.1e-46 187.6 144 66.7
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 1.2e-45 187.2 164 66.5
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 2.7e-45 186.0 174 63.2
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 3.5e-45 185.7 189 59.8
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 4.5e-45 185.3 113 85.8
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 4.5e-45 185.3 109 88.1
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 7.7e-45 184.5 113 85.8
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.0e-44 184.1 140 73.6
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 1.0e-44 184.1 173 61.3
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 1.9e-43 179.9 197 57.4
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 5.5e-43 178.3 138 68.1
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 2.7e-42 176.0 187 55.6
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 2.7e-42 176.0 172 59.9
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 3.6e-42 175.6 108 80.6
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.4e-41 173.7 136 67.6
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 2.3e-41 172.9 142 62.7
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 5.2e-41 171.8 111 81.1
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 3.4e-40 169.1 169 57.4
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.3e-39 167.2 140 67.9
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.4e-38 162.9 169 58.6
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 5.4e-38 161.8 169 58.0
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 2.7e-37 159.5 110 71.8
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 3.5e-37 159.1 132 69.7
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 1.3e-36 157.1 112 70.5
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 8.6e-36 154.5 342 36.5
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 1.2e-34 150.6 153 62.1
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 3.6e-34 149.1 140 65.0
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 1.3e-31 140.6 120 60.0
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 3.6e-26 122.5 159 51.6
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 2.3e-25 119.8 105 57.1
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 1.9e-22 110.2 142 45.1
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 2.4e-22 109.8 88 70.5
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.2e-22 109.4 128 56.2
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 1.2e-21 107.5 94 62.8
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 2.0e-21 106.7 91 63.7
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 1.3e-20 104.0 93 62.4
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 6.6e-20 101.7 87 65.5
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 4.3e-19 99.0 87 64.4
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 4.3e-19 99.0 87 64.4
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 5.2e-17 92.0 81 59.3
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 9.2e-14 81.3 44 95.5
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 1.5e-11 73.9 44 84.1
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.6e-10 70.5 49 77.6
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 2.2e-07 60.1 38 76.3


User provided reference genes

Program Settings