Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G352.2 Capsicum annuum HOM05D005797 ORTHO05D006479 1.2e-152 543.1 270 100.0
Nitab4.5_0003282g0040 Nicotiana tabacum HOM05D005797 ORTHO05D006479 2.9e-21 106.7 99 58.6
PGSC0003DMG401015175 Solanum tuberosum HOM05D005797 ORTHO05D006479 3.2e-20 103.2 90 57.8
Nitab4.5_0010042g0010 Nicotiana tabacum HOM05D005797 ORTHO05D006479 7.1e-20 102.1 103 53.4
Sopen03g030640 Solanum pennellii HOM05D005797 ORTHO05D006479 9.2e-20 101.7 90 56.7
Solyc03g111500.3 Solanum lycopersicum HOM05D005797 ORTHO05D006479 1.6e-19 100.9 90 56.7
CAN.G472.30 Capsicum annuum HOM05D005797 ORTHO05D006479 5.1e-18 95.9 90 54.4
CAN.G1022.5 Capsicum annuum HOM05D005797 ORTHO05D006479 1.1e-17 94.7 63 65.1
PGSC0003DMG400031024 Solanum tuberosum HOM05D005797 ORTHO05D006479 1.5e-17 94.4 66 62.1
CAN.G1022.3 Capsicum annuum HOM05D005797 ORTHO05D006479 1.9e-17 94.0 93 50.5
PGSC0003DMG400034759 Solanum tuberosum HOM05D005797 ORTHO05D006479 3.3e-17 93.2 88 58.0
Solyc03g007140.3 Solanum lycopersicum HOM05D005797 ORTHO05D006479 9.5e-17 91.7 65 63.1
CAN.G769.1 Capsicum annuum HOM05D005797 ORTHO05D006479 1.2e-16 91.3 81 56.8
CAN.G760.5 Capsicum annuum HOM05D005797 ORTHO05D006479 1.6e-16 90.9 62 61.3
Sopen03g003130 Solanum pennellii HOM05D005797 ORTHO05D006479 2.1e-16 90.5 65 61.5
PGSC0003DMG400035342 Solanum tuberosum HOM05D005797 ORTHO05D006479 1.8e-15 87.4 65 61.5
CAN.G472.29 Capsicum annuum HOM05D005797 ORTHO05D006479 2.3e-15 87.0 63 58.7
PGSC0003DMG400046794 Solanum tuberosum HOM05D005797 ORTHO05D006479 2.3e-15 87.0 88 54.5
PGSC0003DMG400044028 Solanum tuberosum HOM05D005797 ORTHO05D006479 4.0e-15 86.3 63 61.9
CAN.G352.1 Capsicum annuum HOM05D005797 ORTHO05D006479 5.2e-15 85.9 80 53.8
PGSC0003DMG400037834 Solanum tuberosum HOM05D005797 ORTHO05D006479 8.9e-15 85.1 59 62.7
Nitab4.5_0002062g0010 Nicotiana tabacum HOM05D005797 ORTHO05D006479 1.5e-14 84.3 55 63.6
Solyc03g111410.3 Solanum lycopersicum HOM05D005797 ORTHO05D006479 2.6e-14 83.6 93 46.2
Nitab4.5_0010931g0020 Nicotiana tabacum HOM05D005797 ORTHO05D006479 4.4e-14 82.8 93 46.2
Peaxi162Scf00536g00111 Petunia axillaris HOM05D005797 ORTHO05D006479 4.4e-14 82.8 97 42.3
Sopen03g030540 Solanum pennellii HOM05D005797 ORTHO05D006479 3.7e-13 79.7 90 45.6
Peaxi162Scf00089g00723 Petunia axillaris HOM05D005797 ORTHO05D006479 4.9e-13 79.3 63 54.0
Solyc10g053890.2 Solanum lycopersicum HOM05D005797 ORTHO05D006479 4.9e-13 79.3 51 66.7
PGSC0003DMG400046008 Solanum tuberosum HOM05D005797 ORTHO05D006479 4.9e-13 79.3 88 52.3
TAR629G0979 Trochodendron aralioides HOM05D005797 ORTHO05D006479 2.7e-11 73.6 95 42.1
Haze_07281 Corylus avellana HOM05D005797 ORTHO05D006479 7.8e-11 72.0 96 37.5
GSVIVG01007552001 Vitis vinifera HOM05D005797 ORTHO05D006479 1.3e-10 71.2 92 42.4
EL10Ac7g18067 Beta vulgaris HOM05D005797 ORTHO05D006479 2.3e-10 70.5 95 37.9
ClCG03G003480 Citrullus lanatus HOM05D005797 ORTHO05D006479 5.1e-10 69.3 95 37.9
QL10p005358 Quercus lobata HOM05D005797 ORTHO05D006479 5.1e-10 69.3 96 38.5
Sed0027282 Sechium edule HOM05D005797 ORTHO05D006479 1.1e-09 68.2 95 40.0
Hund18537 Selenicereus undatus HOM05D005797 ORTHO05D006479 1.1e-09 68.2 95 40.0
CiPaw.11G012700 Carya illinoinensis HOM05D005797 ORTHO05D006479 1.5e-09 67.8 170 30.6
Atru.chr9.1003 Acer truncatum HOM05D005797 ORTHO05D006479 1.9e-09 67.4 92 35.9
CSS0021207 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 1.9e-09 67.4 65 47.7
CSS0032554 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 1.9e-09 67.4 65 47.7
QL05p054837 Quercus lobata HOM05D005797 ORTHO05D006479 2.5e-09 67.0 96 37.5
Sabra12G0067900 Salix brachista HOM05D005797 ORTHO05D006479 2.5e-09 67.0 54 51.9
CSS0013181 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 3.3e-09 66.6 65 46.2
CSS0028554 Camellia sinensis var. sinensis HOM05D005797 ORTHO05D006479 3.3e-09 66.6 65 46.2
PGSC0003DMG400031023 Solanum tuberosum HOM05D005797 ORTHO05D006479 1.2e-08 64.7 38 73.7
Actinidia19380 Actinidia chinensis HOM05D005797 ORTHO05D006479 1.6e-08 64.3 55 49.1
Potri.012G093200 Populus trichocarpa HOM05D005797 ORTHO05D006479 1.6e-08 64.3 54 50.0
AUR62025735 Chenopodium quinoa HOM05D005797 ORTHO05D006479 2.1e-08 63.9 54 48.1
Rhsim01G0114700 Rhododendron simsii HOM05D005797 ORTHO05D006479 2.8e-08 63.5 90 38.9
Prupe.5G157600 Prunus persica HOM05D005797 ORTHO05D006479 4.7e-08 62.8 63 42.9
Sc10g0010330 Simmondsia chinensis HOM05D005797 ORTHO05D006479 4.7e-08 62.8 92 37.0
RcHm_v2.0_Chr7g0191351 Rosa chinensis HOM05D005797 ORTHO05D006479 6.2e-08 62.4 94 38.3
Dinv38477 Davidia involucrata HOM05D005797 ORTHO05D006479 8.1e-08 62.0 94 39.4
MELO3C002331.2 Cucumis melo HOM05D005797 ORTHO05D006479 1.1e-07 61.6 95 34.7
Nn4g22471 Nelumbo nucifera HOM05D005797 ORTHO05D006479 1.1e-07 61.6 95 35.8
RcHm_v2.0_Chr2g0149281 Rosa chinensis HOM05D005797 ORTHO05D006479 1.8e-07 60.8 94 36.2
Lj5A100T65 Lonicera japonica HOM05D005797 ORTHO05D006479 2.4e-07 60.5 57 45.6
MSTRG.9312 Avicennia marina HOM05D005797 ORTHO05D006479 3.1e-07 60.1 91 36.3
CsaV3_1G009280 Cucumis sativus L. HOM05D005797 ORTHO05D006479 3.1e-07 60.1 54 44.4
AUR62001271 Chenopodium quinoa HOM05D005797 ORTHO05D006479 6.8e-07 58.9 54 44.4
Ciclev10019558m.g Citrus clementina HOM05D005797 ORTHO05D006479 1.2e-06 58.2 94 34.0
FAN08G2881 Fragaria x ananassa HOM05D005797 ORTHO05D006479 1.2e-06 58.2 63 44.4
FAN13G0931 Fragaria x ananassa HOM05D005797 ORTHO05D006479 1.2e-06 58.2 63 44.4
Hund05629 Selenicereus undatus HOM05D005797 ORTHO05D006479 1.2e-06 58.2 92 33.7
vmacro21190 Vaccinium macrocarpon HOM05D005797 ORTHO05D006479 1.2e-06 58.2 54 44.4
Eucgr.K02760 Eucalyptus grandis HOM05D005797 ORTHO05D006479 2.0e-06 57.4 96 32.3
Oeu036024.1 Olea europaea HOM05D005797 ORTHO05D006479 2.0e-06 57.4 71 36.6
Nn3g16589 Nelumbo nucifera HOM05D005797 ORTHO05D006479 2.6e-06 57.0 63 36.5
Migut.O00498 Erythranthe guttata HOM05D005797 ORTHO05D006479 4.4e-06 56.2 82 34.1
SalBow1G3539 Salvia bowleyana HOM05D005797 ORTHO05D006479 4.4e-06 56.2 60 41.7
Hund05637 Selenicereus undatus HOM05D005797 ORTHO05D006479 4.4e-06 56.2 92 32.6
FAN04G0892 Fragaria x ananassa HOM05D005797 ORTHO05D006479 5.8e-06 55.8 63 41.3
Medtr3g075140 Medicago truncatula HOM05D005797 ORTHO05D006479 7.6e-06 55.5 99 33.3
Nn3g16591 Nelumbo nucifera HOM05D005797 ORTHO05D006479 7.6e-06 55.5 61 36.1
Hund05636 Selenicereus undatus HOM05D005797 ORTHO05D006479 7.6e-06 55.5 92 32.6
SGA_v2.0_scaffold172G39027 Striga asiatica HOM05D005797 ORTHO05D006479 7.6e-06 55.5 52 40.4
Cc04_g10490 Coffea canephora HOM05D005797 ORTHO05D006479 9.9e-06 55.1 63 39.7
FvH4_5g07280 Fragaria vesca HOM05D005797 ORTHO05D006479 9.9e-06 55.1 63 42.9
FAN18G3318 Fragaria x ananassa HOM05D005797 ORTHO05D006479 9.9e-06 55.1 63 42.9
MD06G1157600 Malus domestica HOM05D005797 ORTHO05D006479 9.9e-06 55.1 52 42.3


User provided reference genes

Program Settings