Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G352.12 Capsicum annuum HOM05D005301 ORTHO05D006433 1.7e-119 432.6 206 100.0
CAN.G352.5 Capsicum annuum HOM05D005301 ORTHO05D006433 4.1e-20 102.4 172 39.0
Actinidia16194 Actinidia chinensis HOM05D005301 ORTHO05D006433 9.2e-20 101.3 172 38.4
PGSC0003DMG400015238 Solanum tuberosum HOM05D005301 ORTHO05D006433 1.2e-19 100.9 172 39.0
Peaxi162Scf00089g00721 Petunia axillaris HOM05D005301 ORTHO05D006433 2.7e-19 99.8 172 37.8
Nitab4.5_0010042g0030 Nicotiana tabacum HOM05D005301 ORTHO05D006433 4.6e-19 99.0 172 38.4
Cc04_g10470 Coffea canephora HOM05D005301 ORTHO05D006433 1.3e-18 97.4 172 37.2
Dinv11108 Davidia involucrata HOM05D005301 ORTHO05D006433 1.3e-18 97.4 172 37.2
Nitab4.5_0003282g0130 Nicotiana tabacum HOM05D005301 ORTHO05D006433 1.3e-18 97.4 172 37.8
Solyc03g111390.4 Solanum lycopersicum HOM05D005301 ORTHO05D006433 1.3e-18 97.4 172 37.8
Sopen03g030520 Solanum pennellii HOM05D005301 ORTHO05D006433 1.3e-18 97.4 172 37.8
HanXRQChr09g0272861 Helianthus annuus HOM05D005301 ORTHO05D006433 1.7e-18 97.1 172 36.6
Lsat_1_v5_gn_4_78900 Lactuca sativa HOM05D005301 ORTHO05D006433 1.7e-18 97.1 172 36.6
SalBow4G2023 Salvia bowleyana HOM05D005301 ORTHO05D006433 2.3e-18 96.7 172 37.2
AUR62025732 Chenopodium quinoa HOM05D005301 ORTHO05D006433 3.0e-18 96.3 165 38.8
Migut.I00257 Erythranthe guttata HOM05D005301 ORTHO05D006433 3.9e-18 95.9 172 36.6
vmacro19243 Vaccinium macrocarpon HOM05D005301 ORTHO05D006433 8.6e-18 94.7 205 33.2
ECA232G2312 Erigeron canadensis HOM05D005301 ORTHO05D006433 1.1e-17 94.4 172 36.0
FAN08G2537 Fragaria x ananassa HOM05D005301 ORTHO05D006433 1.1e-17 94.4 156 39.1
TAR374G1436 Trochodendron aralioides HOM05D005301 ORTHO05D006433 1.1e-17 94.4 172 36.6
EL10Ac7g18070 Beta vulgaris HOM05D005301 ORTHO05D006433 1.5e-17 94.0 172 37.2
CiPaw.11G012400 Carya illinoinensis HOM05D005301 ORTHO05D006433 1.5e-17 94.0 172 37.2
Nn4g22465 Nelumbo nucifera HOM05D005301 ORTHO05D006433 1.9e-17 93.6 172 36.0
Oeu011576.1 Olea europaea HOM05D005301 ORTHO05D006433 4.3e-17 92.4 172 35.5
Atru.chr9.1005 Acer truncatum HOM05D005301 ORTHO05D006433 7.3e-17 91.7 172 36.6
Aqoxy5G03589 Aquilegia oxysepala HOM05D005301 ORTHO05D006433 9.5e-17 91.3 172 35.5
QL10p005311 Quercus lobata HOM05D005301 ORTHO05D006433 9.5e-17 91.3 172 35.5
PSO063G0990 Papaver somniferum HOM05D005301 ORTHO05D006433 1.2e-16 90.9 172 34.3
PSO782G4848 Papaver somniferum HOM05D005301 ORTHO05D006433 1.2e-16 90.9 172 34.3
Sc22g0004050 Simmondsia chinensis HOM05D005301 ORTHO05D006433 1.2e-16 90.9 172 36.0
Ciclev10019136m.g Citrus clementina HOM05D005301 ORTHO05D006433 2.8e-16 89.7 172 36.0
Haze_07279 Corylus avellana HOM05D005301 ORTHO05D006433 2.8e-16 89.7 172 36.0
GSVIVG01007548001 Vitis vinifera HOM05D005301 ORTHO05D006433 3.6e-16 89.4 172 36.0
CANSAT80G2324 Cannabis sativa HOM05D005301 ORTHO05D006433 4.7e-16 89.0 172 35.5
AUR62001274 Chenopodium quinoa HOM05D005301 ORTHO05D006433 4.7e-16 89.0 195 33.8
FAN04G2720 Fragaria x ananassa HOM05D005301 ORTHO05D006433 4.7e-16 89.0 169 35.5
Manes.06G114900 Manihot esculenta HOM05D005301 ORTHO05D006433 4.7e-16 89.0 167 35.9
Glyma.04G192600 Glycine max HOM05D005301 ORTHO05D006433 6.2e-16 88.6 172 34.9
TWI39G1189 Tripterygium wilfordii HOM05D005301 ORTHO05D006433 6.2e-16 88.6 172 35.5
arahy.Tifrunner.gnm1.ann1.11HRG0 Arachis hypogaea HOM05D005301 ORTHO05D006433 8.0e-16 88.2 172 35.5
FvH4_5g07300 Fragaria vesca HOM05D005301 ORTHO05D006433 8.0e-16 88.2 172 35.5
FAN13G0064 Fragaria x ananassa HOM05D005301 ORTHO05D006433 8.0e-16 88.2 168 35.7
Thecc.03G122400 Theobroma cacao HOM05D005301 ORTHO05D006433 8.0e-16 88.2 172 36.0
CsaV3_1G000790 Cucumis sativus L. HOM05D005301 ORTHO05D006433 1.4e-15 87.4 172 34.9
FAN18G2536 Fragaria x ananassa HOM05D005301 ORTHO05D006433 1.8e-15 87.0 172 34.9
Lj9A475G63 Lonicera japonica HOM05D005301 ORTHO05D006433 1.8e-15 87.0 92 52.2
Sabra15G0112300 Salix brachista HOM05D005301 ORTHO05D006433 1.8e-15 87.0 172 34.9
THA.LOC104825004 Tarenaya hassleriana HOM05D005301 ORTHO05D006433 1.8e-15 87.0 172 34.9
AL8G24360 Arabidopsis lyrata HOM05D005301 ORTHO05D006433 2.3e-15 86.7 172 34.9
AT5G50310 Arabidopsis thaliana HOM05D005301 ORTHO05D006433 2.3e-15 86.7 172 34.9
BcaB01g02903 Brassica carinata HOM05D005301 ORTHO05D006433 2.3e-15 86.7 172 34.9
BcaC01g04820 Brassica carinata HOM05D005301 ORTHO05D006433 2.3e-15 86.7 172 34.9
A03p27760 Brassica napus HOM05D005301 ORTHO05D006433 2.3e-15 86.7 172 34.9
BolC3t15670H Brassica oleracea HOM05D005301 ORTHO05D006433 2.3e-15 86.7 172 34.9
BraA03t11987Z Brassica rapa HOM05D005301 ORTHO05D006433 2.3e-15 86.7 172 34.9
CARHR258240 Cardamine hirsuta HOM05D005301 ORTHO05D006433 2.3e-15 86.7 172 34.9
ClCG06G017670 Citrullus lanatus HOM05D005301 ORTHO05D006433 2.3e-15 86.7 172 34.3
Psat6g217880 Pisum sativum HOM05D005301 ORTHO05D006433 2.3e-15 86.7 172 34.3
Potri.015G090100 Populus trichocarpa HOM05D005301 ORTHO05D006433 2.3e-15 86.7 172 34.9
Thhalv10012907m.g Eutrema salsugineum HOM05D005301 ORTHO05D006433 3.1e-15 86.3 172 34.3
Glyma.06G173200 Glycine max HOM05D005301 ORTHO05D006433 3.1e-15 86.3 172 34.3
Cfa018895 Carpinus fangiana HOM05D005301 ORTHO05D006433 4.0e-15 85.9 182 34.1
Duzib205G0739 Durio zibethinus HOM05D005301 ORTHO05D006433 4.0e-15 85.9 172 34.3
Gohir.D12G190800 Gossypium hirsutum HOM05D005301 ORTHO05D006433 4.0e-15 85.9 172 34.3
Gorai.008G204700 Gossypium raimondii HOM05D005301 ORTHO05D006433 4.0e-15 85.9 172 34.3
Lalb_Chr11g0069731 Lupinus albus HOM05D005301 ORTHO05D006433 4.0e-15 85.9 172 33.7
Prupe.5G157400 Prunus persica HOM05D005301 ORTHO05D006433 4.0e-15 85.9 172 35.5
Carub.0008s1035 Capsella rubella HOM05D005301 ORTHO05D006433 5.2e-15 85.5 172 34.3
CDE02G1357 Ceratophyllum demersum HOM05D005301 ORTHO05D006433 5.2e-15 85.5 172 33.7
Gohir.A12G188000 Gossypium hirsutum HOM05D005301 ORTHO05D006433 5.2e-15 85.5 172 34.3
Medtr1g107265 Medicago truncatula HOM05D005301 ORTHO05D006433 5.2e-15 85.5 172 33.7
Cpa.g.sc52.37 Carica papaya HOM05D005301 ORTHO05D006433 8.9e-15 84.7 172 34.3
Phvul.009G169100 Phaseolus vulgaris HOM05D005301 ORTHO05D006433 8.9e-15 84.7 172 34.3
Sed0013046 Sechium edule HOM05D005301 ORTHO05D006433 8.9e-15 84.7 172 33.7
HPP92_004584 Vanilla planifolia HOM05D005301 ORTHO05D006433 8.9e-15 84.7 172 34.3
MBI06_g16660_MAGBIO Magnolia biondii HOM05D005301 ORTHO05D006433 1.5e-14 84.0 173 34.1
Aa31LG3G5920 Aethionema arabicum HOM05D005301 ORTHO05D006433 2.0e-14 83.6 172 34.3
PGR083G1269 Punica granatum HOM05D005301 ORTHO05D006433 2.0e-14 83.6 172 34.9
Sp6g12390 Schrenkiella parvula HOM05D005301 ORTHO05D006433 2.6e-14 83.2 172 34.3
Lj1g0016804 Lotus japonicus HOM05D005301 ORTHO05D006433 3.4e-14 82.8 172 32.6
MD06G1157400 Malus domestica HOM05D005301 ORTHO05D006433 3.4e-14 82.8 172 34.3
MD14G1164000 Malus domestica HOM05D005301 ORTHO05D006433 4.4e-14 82.4 172 33.7
RcHm_v2.0_Chr7g0191331 Rosa chinensis HOM05D005301 ORTHO05D006433 5.8e-14 82.0 172 33.7
Eucgr.L01339 Eucalyptus grandis HOM05D005301 ORTHO05D006433 7.5e-14 81.6 172 32.6
ATR0824G115 Amborella trichopoda HOM05D004726 ORTHO05D005986 2.2e-13 80.1 172 32.0
QL04p021669 Quercus lobata HOM05D005301 ORTHO05D006433 2.2e-13 80.1 168 33.3
SGA_v2.0_scaffold102G29851 Striga asiatica HOM05D005301 ORTHO05D006433 3.7e-13 79.3 103 45.6
Os04g0483600 Oryza sativa ssp. japonica HOM05D005301 ORTHO05D006433 1.1e-12 77.8 172 32.6
C03p33480 Brassica napus HOM05D005301 ORTHO05D006433 2.4e-12 76.6 198 30.3
Hund05643 Selenicereus undatus HOM05D005301 ORTHO05D006433 4.6e-11 72.4 80 50.0
BcaC01g04819 Brassica carinata HOM05D005301 ORTHO05D006433 6.0e-11 72.0 89 44.9
Ah.08g218140 Amaranthus hybridus HOM05D005301 ORTHO05D006433 3.0e-10 69.7 143 32.2
Zm00001eb079290 Zea mays HOM05D005301 ORTHO05D006433 1.1e-09 67.8 102 39.2
Mapoly0001s0540 Marchantia polymorpha HOM05D005301 ORTHO05D006433 4.3e-09 65.9 107 38.3
SMO200G0038 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 5.6e-09 65.5 54 59.3
arahy.Tifrunner.gnm1.ann1.86E75A Arachis hypogaea HOM05D005301 ORTHO05D006433 1.6e-08 63.9 78 44.9
SMO200G0119 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 1.6e-08 63.9 94 39.4
COL.COLO4_09264 Corchorus olitorius HOM05D005301 ORTHO05D006433 2.8e-08 63.2 143 30.8
Eucgr.B00150 Eucalyptus grandis HOM05D005301 ORTHO05D006433 3.6e-08 62.8 112 33.9
MELO3C026231.2 Cucumis melo HOM05D005301 ORTHO05D006433 6.2e-08 62.0 143 29.4
Pp3c16_5780 Physcomitrium patens HOM05D005301 ORTHO05D006433 6.2e-08 62.0 167 28.1
SMO339G0058 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 6.2e-08 62.0 172 27.9
CSS0020432 Camellia sinensis var. sinensis HOM05D005301 ORTHO05D006433 8.1e-08 61.6 40 67.5
Eucgr.B00154 Eucalyptus grandis HOM05D005301 ORTHO05D006433 1.1e-07 61.2 113 32.7
CSS0020618 Camellia sinensis var. sinensis HOM05D005301 ORTHO05D006433 1.4e-07 60.8 61 49.2
Ca_16092_v3 Cicer arietinum L. HOM05D005301 ORTHO05D006433 1.4e-07 60.8 152 28.9
Rhsim08G0184700 Rhododendron simsii HOM05D005301 ORTHO05D006433 1.4e-07 60.8 61 49.2
SMO024G0003 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 6.8e-07 58.5 50 58.0
SMO200G0133 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 6.8e-07 58.5 50 58.0
SMO200G0172 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 6.8e-07 58.5 50 58.0
AagrBONN_evm.TU.Sc2ySwM_344.1825 Anthoceros agrestis HOM05D005301 ORTHO05D006433 2.0e-06 57.0 107 34.6
SEGI_22253 Sequoiadendron giganteum HOM05D005301 ORTHO05D006433 4.4e-06 55.8 114 31.6
SMO200G0253 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 5.8e-06 55.5 51 49.0


User provided reference genes

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