Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 4.1e-89 331.3 154 100.0
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.7e-74 282.7 152 85.5
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 2.2e-74 282.3 151 85.4
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 2.1e-69 265.8 152 79.6
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 2.6e-59 232.3 159 64.8
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 4.4e-59 231.5 145 67.6
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 4.9e-58 228.0 129 74.4
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 2.7e-56 222.2 123 74.0
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 4.6e-56 221.5 130 73.1
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 1.3e-55 219.9 164 67.7
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 2.9e-55 218.8 123 76.4
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 8.6e-55 217.2 130 71.5
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 1.9e-54 216.1 131 68.7
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 1.9e-54 216.1 125 76.0
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 3.3e-54 215.3 134 71.6
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 3.3e-54 215.3 134 71.6
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 5.6e-54 214.5 151 66.9
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 9.5e-54 213.8 126 72.2
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 1.6e-53 213.0 151 66.9
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 3.6e-53 211.8 154 61.7
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 4.7e-53 211.5 127 68.5
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 6.1e-53 211.1 136 68.4
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 8.0e-53 210.7 127 70.9
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.0e-52 210.3 126 72.2
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 1.4e-52 209.9 130 70.8
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 1.4e-52 209.9 134 65.7
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 1.4e-52 209.9 131 67.2
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 1.8e-52 209.5 152 60.5
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 2.3e-52 209.1 132 69.7
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 3.1e-52 208.8 151 65.6
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 4.0e-52 208.4 151 63.6
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 4.0e-52 208.4 132 65.2
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 4.0e-52 208.4 126 69.0
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 8.9e-52 207.2 149 65.1
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 1.5e-51 206.5 127 69.3
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 1.5e-51 206.5 134 66.4
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 2.0e-51 206.1 128 71.1
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 2.0e-51 206.1 134 68.7
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 4.4e-51 204.9 126 69.8
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 4.4e-51 204.9 149 63.8
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 7.5e-51 204.1 148 62.8
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 7.5e-51 204.1 150 61.3
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 7.5e-51 204.1 152 63.2
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 1.3e-50 203.4 126 69.8
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.3e-50 203.4 153 63.4
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.3e-50 203.4 126 69.8
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.7e-50 203.0 137 65.7
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 1.7e-50 203.0 153 63.4
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 2.9e-50 202.2 150 60.0
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 3.7e-50 201.8 150 61.3
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 3.7e-50 201.8 130 66.9
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 3.7e-50 201.8 155 61.3
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 4.9e-50 201.4 150 62.0
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 4.9e-50 201.4 150 62.0
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 4.9e-50 201.4 150 62.0
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 6.4e-50 201.1 131 64.9
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 8.3e-50 200.7 141 64.5
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 8.3e-50 200.7 129 63.6
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 8.3e-50 200.7 127 66.1
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 1.1e-49 200.3 131 66.4
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 1.1e-49 200.3 124 67.7
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.4e-49 199.9 121 70.2
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 1.9e-49 199.5 125 66.4
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 4.1e-49 198.4 150 60.7
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 5.4e-49 198.0 131 64.9
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 1.2e-48 196.8 151 58.3
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 1.2e-48 196.8 131 66.4
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 1.2e-48 196.8 117 69.2
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 2.0e-48 196.1 140 57.9
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 3.5e-48 195.3 154 58.4
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 4.6e-48 194.9 131 66.4
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 6.0e-48 194.5 166 54.8
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 7.8e-48 194.1 160 57.5
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 6.6e-47 191.0 148 64.9
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 1.1e-46 190.3 121 66.9
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 1.5e-46 189.9 165 54.5
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 4.3e-46 188.3 110 72.7
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 5.6e-46 188.0 123 66.7
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 5.2e-44 181.4 126 62.7
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 1.5e-43 179.9 123 60.2
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 5.8e-43 177.9 127 59.8
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 8.3e-42 174.1 104 69.2
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.9e-41 172.9 131 58.8
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 1.2e-40 170.2 122 63.1
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 1.2e-40 170.2 115 60.0
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 2.3e-39 166.0 102 64.7
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 6.6e-39 164.5 122 61.5
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 6.6e-39 164.5 123 61.8
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 5.6e-38 161.4 117 57.3
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 3.6e-37 158.7 133 56.4
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 8.1e-37 157.5 113 55.8
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 6.8e-36 154.5 138 54.3
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 2.6e-35 152.5 133 54.9
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 2.9e-34 149.1 88 71.6
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 8.9e-28 127.5 86 64.0
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.9e-25 119.8 73 63.0
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 2.4e-17 92.8 130 37.7
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.1e-16 89.7 56 69.6
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 4.8e-13 78.6 54 63.0
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 6.9e-12 74.7 49 67.3
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 7.6e-11 71.2 43 67.4


User provided reference genes

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