Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G350.33 Capsicum annuum HOM05D005271 ORTHO05D006072 1.1e-51 206.5 107 100.0
Nitab4.5_0002741g0010 Nicotiana tabacum HOM05D005271 ORTHO05D006072 7.1e-48 193.7 107 91.6
Nitab4.5_0004741g0030 Nicotiana tabacum HOM05D005271 ORTHO05D006072 5.1e-46 187.6 107 87.9
Peaxi162Scf00004g02726 Petunia axillaris HOM05D005271 ORTHO05D006072 4.7e-44 181.0 125 79.2
Sopen11g025310 Solanum pennellii HOM05D005271 ORTHO05D006072 1.7e-41 172.6 93 92.5
Oeu017888.1 Olea europaea HOM05D005271 ORTHO05D006072 5.2e-35 151.0 107 67.3
CSS0040197 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 7.6e-34 147.1 107 69.2
Cc10_g11580 Coffea canephora HOM05D005271 ORTHO05D006072 9.9e-34 146.7 107 67.3
Psat0s5346g0120 Pisum sativum HOM05D005271 ORTHO05D006072 1.7e-33 146.0 88 79.5
Potri.001G160500 Populus trichocarpa HOM05D005271 ORTHO05D006072 2.2e-33 145.6 107 69.2
Thecc.04G266100 Theobroma cacao HOM05D005271 ORTHO05D006072 4.9e-33 144.4 105 69.5
Medtr6g017185 Medicago truncatula HOM05D005271 ORTHO05D006072 6.4e-33 144.1 106 72.6
Cfa001130 Carpinus fangiana HOM05D005271 ORTHO05D006072 2.4e-32 142.1 107 69.2
Glyma.19G010500 Glycine max HOM05D005271 ORTHO05D006072 3.2e-32 141.7 103 71.8
CANSAT25G1004 Cannabis sativa HOM05D005271 ORTHO05D006072 4.2e-32 141.4 105 68.6
ECA238G4336 Erigeron canadensis HOM05D005271 ORTHO05D006072 4.2e-32 141.4 107 63.6
Dinv31186 Davidia involucrata HOM05D005271 ORTHO05D006072 7.1e-32 140.6 107 65.4
QL11p012305 Quercus lobata HOM05D005271 ORTHO05D006072 7.1e-32 140.6 89 75.3
HanXRQChr14g0428301 Helianthus annuus HOM05D005271 ORTHO05D006072 9.3e-32 140.2 107 65.4
Lj2g0008924 Lotus japonicus HOM05D005271 ORTHO05D006072 9.3e-32 140.2 102 68.6
Ca_28197_v3 Cicer arietinum L. HOM05D005271 ORTHO05D006072 1.2e-31 139.8 86 79.1
Gohir.A09G226900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 1.2e-31 139.8 86 76.7
Phvul.004G017800 Phaseolus vulgaris HOM05D005271 ORTHO05D006072 1.6e-31 139.4 103 68.9
Actinidia22429 Actinidia chinensis HOM05D005271 ORTHO05D006072 2.1e-31 139.0 107 66.4
CiPaw.09G137400 Carya illinoinensis HOM05D005271 ORTHO05D006072 2.1e-31 139.0 107 67.3
Manes.05G190800 Manihot esculenta HOM05D005271 ORTHO05D006072 2.1e-31 139.0 100 70.0
Gohir.D09G227900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 2.7e-31 138.7 86 75.6
Gorai.006G250600 Gossypium raimondii HOM05D005271 ORTHO05D006072 2.7e-31 138.7 86 75.6
Sabra01G0131700 Salix brachista HOM05D005271 ORTHO05D006072 3.5e-31 138.3 120 63.3
Ciclev10017270m.g Citrus clementina HOM05D005271 ORTHO05D006072 4.6e-31 137.9 105 65.7
Duzib151G0973 Durio zibethinus HOM05D005271 ORTHO05D006072 6.0e-31 137.5 105 66.7
VMungo0464G2009 Vigna mungo HOM05D005271 ORTHO05D006072 6.0e-31 137.5 103 67.0
DCAR_002456 Daucus carota HOM05D005271 ORTHO05D006072 1.3e-30 136.3 107 62.6
DCAR_002458 Daucus carota HOM05D005271 ORTHO05D006072 1.3e-30 136.3 107 62.6
Glyma.13G170400 Glycine max HOM05D005271 ORTHO05D006072 1.3e-30 136.3 89 76.4
FvH4_3g12930 Fragaria vesca HOM05D005271 ORTHO05D006072 1.7e-30 136.0 107 63.6
FAN11G1405 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.7e-30 136.0 107 63.6
Lsat_1_v5_gn_2_4960 Lactuca sativa HOM05D005271 ORTHO05D006072 1.7e-30 136.0 90 70.0
Rhsim04G0167900 Rhododendron simsii HOM05D005271 ORTHO05D006072 1.7e-30 136.0 107 65.4
Cpa.g.sc51.137 Carica papaya HOM05D005271 ORTHO05D006072 2.3e-30 135.6 107 61.7
Duzib212G0597 Durio zibethinus HOM05D005271 ORTHO05D006072 2.3e-30 135.6 105 66.7
FvH4_4g01060 Fragaria vesca HOM05D005271 ORTHO05D006072 2.3e-30 135.6 107 64.5
FAN12G2425 Fragaria x ananassa HOM05D005271 ORTHO05D006072 2.3e-30 135.6 107 64.5
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 2.3e-30 135.6 107 63.6
vmacro03554 Vaccinium macrocarpon HOM05D005271 ORTHO05D006072 3.0e-30 135.2 107 64.5
FAN16G1303 Fragaria x ananassa HOM05D005271 ORTHO05D006072 3.9e-30 134.8 106 62.3
PGR142G2670 Punica granatum HOM05D005271 ORTHO05D006072 3.9e-30 134.8 107 62.6
Manes.01G042100 Manihot esculenta HOM05D005271 ORTHO05D006072 5.1e-30 134.4 108 66.7
TWI15G1056 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 5.1e-30 134.4 107 63.6
TAR629G0996 Trochodendron aralioides HOM05D005271 ORTHO05D006072 5.1e-30 134.4 107 61.7
arahy.Tifrunner.gnm1.ann1.VX2J7C Arachis hypogaea HOM05D005271 ORTHO05D006072 6.6e-30 134.0 104 64.4
TAR627G0156 Trochodendron aralioides HOM05D005271 ORTHO05D006072 6.6e-30 134.0 107 62.6
Nn7g38328 Nelumbo nucifera HOM05D005271 ORTHO05D006072 8.7e-30 133.7 107 64.5
arahy.Tifrunner.gnm1.ann1.5IT82G Arachis hypogaea HOM05D005271 ORTHO05D006072 1.1e-29 133.3 105 65.7
TWI63G0865 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 1.1e-29 133.3 107 62.6
arahy.Tifrunner.gnm1.ann1.0KQV7A Arachis hypogaea HOM05D005271 ORTHO05D006072 1.5e-29 132.9 104 63.5
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea HOM05D005271 ORTHO05D006072 1.5e-29 132.9 104 63.5
RcHm_v2.0_Chr5g0021041 Rosa chinensis HOM05D005271 ORTHO05D006072 1.5e-29 132.9 106 62.3
ClCG01G025510 Citrullus lanatus HOM05D005271 ORTHO05D006072 1.9e-29 132.5 107 61.7
Migut.C01265 Erythranthe guttata HOM05D005271 ORTHO05D006072 1.9e-29 132.5 107 64.5
SGA_v2.0_scaffold149G36579 Striga asiatica HOM05D005271 ORTHO05D006072 1.9e-29 132.5 107 64.5
FAN22G0530 Fragaria x ananassa HOM05D005271 ORTHO05D006072 2.5e-29 132.1 107 63.6
AT1G05780 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 4.3e-29 131.3 107 60.7
CsaV3_6G052780 Cucumis sativus L. HOM05D005271 ORTHO05D006072 4.3e-29 131.3 107 61.7
Migut.N03355 Erythranthe guttata HOM05D005271 ORTHO05D006072 4.3e-29 131.3 107 64.5
AL1G15680 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 5.6e-29 131.0 107 59.8
Prupe.4G117300 Prunus persica HOM05D005271 ORTHO05D006072 7.3e-29 130.6 106 62.3
PGSC0003DMG400010917 Solanum tuberosum HOM05D005271 ORTHO05D006072 7.3e-29 130.6 74 90.5
Gohir.A10G107101 Gossypium hirsutum HOM05D005271 ORTHO05D006072 9.6e-29 130.2 104 63.5
HanXRQChr06g0184021 Helianthus annuus HOM05D005271 ORTHO05D006072 9.6e-29 130.2 107 62.6
Sed0007631 Sechium edule HOM05D005271 ORTHO05D006072 9.6e-29 130.2 107 61.7
Sc10g0007720 Simmondsia chinensis HOM05D005271 ORTHO05D006072 9.6e-29 130.2 94 64.9
BraA03t11049Z Brassica rapa HOM05D000364 ORTHO05D006072 1.3e-28 129.8 90 66.7
MSTRG.22460 Avicennia marina HOM05D005271 ORTHO05D006072 1.6e-28 129.4 106 63.2
MELO3C007032.2 Cucumis melo HOM05D005271 ORTHO05D006072 1.6e-28 129.4 107 60.7
Aa31LG5G5280 Aethionema arabicum HOM05D005271 ORTHO05D006072 2.1e-28 129.0 90 65.6
arahy.Tifrunner.gnm1.ann1.FU3306 Arachis hypogaea HOM05D005271 ORTHO05D006072 2.1e-28 129.0 104 63.5
THA.LOC104815870 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 2.8e-28 128.6 107 60.7
A03p17850 Brassica napus HOM05D000364 ORTHO05D006072 3.6e-28 128.3 90 65.6
Carub.0004s1300 Capsella rubella HOM05D005271 ORTHO05D006072 4.8e-28 127.9 90 65.6
Lalb_Chr02g0160001 Lupinus albus HOM05D005271 ORTHO05D006072 4.8e-28 127.9 102 63.7
Lalb_Chr02g0160211 Lupinus albus HOM05D005271 ORTHO05D006072 4.8e-28 127.9 102 63.7
AT2G31710 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 6.2e-28 127.5 90 66.7
Cc03_g07280 Coffea canephora HOM05D005271 ORTHO05D006072 8.1e-28 127.1 93 66.7
Atru.chr1.851 Acer truncatum HOM05D005271 ORTHO05D006072 1.4e-27 126.3 107 62.6
Aqoxy1G00251 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 1.4e-27 126.3 107 58.9
THA.LOC104800917 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 1.4e-27 126.3 90 64.4
AL4G26950 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 1.8e-27 125.9 90 65.6
BcaC01g05934 Brassica carinata HOM05D000364 ORTHO05D006072 2.4e-27 125.6 90 64.4
C03p20920 Brassica napus HOM05D000364 ORTHO05D006072 2.4e-27 125.6 90 64.4
MD10G1227700 Malus domestica HOM05D005271 ORTHO05D006072 2.4e-27 125.6 93 64.5
Oeu021212.1 Olea europaea HOM05D005271 ORTHO05D006072 3.1e-27 125.2 107 61.7
Hma1.2p1_0088F.1_g045170 Hydrangea macrophylla HOM05D005271 ORTHO05D006072 4.0e-27 124.8 107 59.8
Thhalv10017819m.g Eutrema salsugineum HOM05D005271 ORTHO05D006072 5.3e-27 124.4 89 65.2
PSO541G1812 Papaver somniferum HOM05D005271 ORTHO05D006072 5.3e-27 124.4 108 59.3
MD05G1247100 Malus domestica HOM05D005271 ORTHO05D006072 6.9e-27 124.0 93 67.7
GSVIVG01012142001 Vitis vinifera HOM05D005271 ORTHO05D006072 6.9e-27 124.0 93 68.8
BcaB01g04025 Brassica carinata HOM05D005271 ORTHO05D006072 9.0e-27 123.6 85 65.9
Rhsim12G0144200 Rhododendron simsii HOM05D005271 ORTHO05D006072 1.2e-26 123.2 128 53.9
BcaB06g28531 Brassica carinata HOM05D005271 ORTHO05D006072 1.5e-26 122.9 90 62.2
C04p60870 Brassica napus HOM05D005271 ORTHO05D006072 1.5e-26 122.9 90 62.2
BolC4t27578H Brassica oleracea HOM05D005271 ORTHO05D006072 1.5e-26 122.9 90 62.2
PSO675G0749 Papaver somniferum HOM05D005271 ORTHO05D006072 2.0e-26 122.5 108 57.4
PSO782G3340 Papaver somniferum HOM05D005271 ORTHO05D006072 2.0e-26 122.5 109 59.6
A04p24140 Brassica napus HOM05D005271 ORTHO05D006072 2.6e-26 122.1 90 62.2
CARHR125350 Cardamine hirsuta HOM05D005271 ORTHO05D006072 3.4e-26 121.7 90 64.4
CARHR005290 Cardamine hirsuta HOM05D005271 ORTHO05D006072 4.5e-26 121.3 107 55.1
BraA04t17934Z Brassica rapa HOM05D005271 ORTHO05D006072 5.8e-26 120.9 90 62.2
SalBow6G1192 Salvia bowleyana HOM05D005271 ORTHO05D006072 1.3e-25 119.8 105 60.0
Ah.05g173390 Amaranthus hybridus HOM05D005271 ORTHO05D006072 2.9e-25 118.6 104 57.7
SalBow1G3231 Salvia bowleyana HOM05D005271 ORTHO05D006072 2.9e-25 118.6 105 59.0
PSO170G3626 Papaver somniferum HOM05D005271 ORTHO05D006072 6.4e-25 117.5 84 66.7
unitig_0.g914 Utricularia gibba HOM05D000362 ORTHO05D000325 8.4e-25 117.1 107 53.3
EL10Ac1g00803 Beta vulgaris HOM05D005271 ORTHO05D006072 1.9e-24 115.9 97 57.7
CDE05G1696 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 1.9e-24 115.9 107 59.8
A05p13810 Brassica napus HOM05D005271 ORTHO05D006072 4.2e-24 114.8 104 53.8
SGA_v2.0_scaffold118G32500 Striga asiatica HOM05D005271 ORTHO05D006072 7.1e-24 114.0 107 59.8
CDE05G0701 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 9.3e-24 113.6 108 56.5
SalBow7G2991 Salvia bowleyana HOM05D005271 ORTHO05D006072 2.1e-23 112.5 99 59.6
BolC4t23374H Brassica oleracea HOM05D005271 ORTHO05D006072 2.7e-23 112.1 89 60.7
Ah.01g016950 Amaranthus hybridus HOM05D005271 ORTHO05D006072 3.5e-23 111.7 87 58.6
C04p18180 Brassica napus HOM05D005271 ORTHO05D006072 4.6e-23 111.3 107 54.2
ATR1120G033 Amborella trichopoda HOM05D005271 ORTHO05D006072 7.9e-23 110.5 102 52.9
BcaB02g10411 Brassica carinata HOM05D000896 ORTHO05D006072 7.9e-23 110.5 107 54.2
AUR62023913 Chenopodium quinoa HOM05D005271 ORTHO05D006072 1.3e-22 109.8 86 58.1
BcaC02g11279 Brassica carinata HOM05D005271 ORTHO05D006072 3.9e-22 108.2 107 53.3
Os04g0612900 Oryza sativa ssp. japonica HOM05D005271 ORTHO05D006072 8.7e-22 107.1 108 52.8
HPP92_012976 Vanilla planifolia HOM05D005271 ORTHO05D006072 2.5e-21 105.5 108 50.9
AUR62038333 Chenopodium quinoa HOM05D005271 ORTHO05D006072 5.6e-21 104.4 99 50.5
Zm00001eb071020 Zea mays HOM05D005271 ORTHO05D006072 1.3e-20 103.2 108 50.9
CSS0024418 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 3.7e-20 101.7 75 69.3
COL.COLO4_15978 Corchorus olitorius HOM05D005271 ORTHO05D006072 2.6e-18 95.5 75 68.0
Haze_05264 Corylus avellana HOM05D005271 ORTHO05D006072 9.9e-18 93.6 75 70.7
SMO300G0007 Selaginella moellendorffii HOM05D005271 ORTHO05D006072 8.4e-17 90.5 86 54.7
Mapoly0098s0021 Marchantia polymorpha HOM05D005271 ORTHO05D006072 3.2e-16 88.6 82 58.5
Pp3c12_11530 Physcomitrium patens HOM05D005271 ORTHO05D006072 4.2e-16 88.2 111 51.4
Hund17073 Selenicereus undatus HOM05D005271 ORTHO05D006072 1.2e-15 86.7 59 67.8
Eucgr.H02355 Eucalyptus grandis HOM05D005271 ORTHO05D006072 2.1e-15 85.9 75 61.3
EL10Ac9g21107 Beta vulgaris HOM05D005271 ORTHO05D006072 2.3e-14 82.4 75 54.7
MBI02_g01139_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 1.5e-13 79.7 76 56.6
Hund00748 Selenicereus undatus HOM05D005271 ORTHO05D006072 3.3e-13 78.6 57 61.4
AUR62004132 Chenopodium quinoa HOM05D005271 ORTHO05D006072 3.7e-12 75.1 51 68.6
MBI14_g01725_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 2.4e-11 72.4 85 48.2
CBR_g30301 Chara braunii HOM05D005271 ORTHO05D006072 7.6e-10 67.4 67 47.8
Aqoxy3G03156 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 1.0e-09 67.0 70 52.9
Zm00001eb430740 Zea mays HOM05D005271 ORTHO05D006072 1.3e-09 66.6 89 47.2
Solyc11g065610.1 Solanum lycopersicum HOM05D005271 ORTHO05D006072 1.1e-08 63.5 33 87.9


User provided reference genes

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