Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 2.9e-120 435.3 221 100.0
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 3.8e-96 355.1 225 82.7
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 4.9e-96 354.8 223 81.6
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 5.1e-93 344.7 224 78.1
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 8.2e-91 337.4 223 75.8
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 3.1e-90 335.5 223 74.9
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 2.6e-89 332.4 222 75.2
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 2.5e-55 219.5 225 51.1
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 3.2e-55 219.2 226 51.3
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 5.5e-55 218.4 228 53.1
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 3.6e-54 215.7 223 53.4
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 1.8e-53 213.4 211 52.1
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 6.8e-53 211.5 225 49.8
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 6.8e-53 211.5 225 49.8
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 6.8e-53 211.5 225 51.6
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 9.8e-52 207.6 225 49.3
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 1.3e-51 207.2 219 48.4
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 1.4e-50 203.8 226 46.9
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 2.0e-49 199.9 181 54.1
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 5.9e-49 198.4 225 45.8
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.0e-48 197.6 184 51.1
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 1.3e-48 197.2 185 51.4
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 1.7e-48 196.8 225 49.3
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 6.5e-48 194.9 208 48.6
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 1.5e-47 193.7 233 44.2
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 3.6e-46 189.1 219 47.0
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 1.8e-45 186.8 187 48.1
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 2.3e-45 186.4 183 50.3
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 8.8e-45 184.5 226 45.6
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 3.4e-44 182.6 231 40.3
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 3.4e-44 182.6 236 41.9
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 4.4e-44 182.2 181 51.4
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 7.5e-44 181.4 180 49.4
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 9.8e-44 181.0 178 46.1
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.3e-43 180.6 173 50.9
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 4.9e-43 178.7 226 45.6
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 2.4e-42 176.4 178 47.8
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.2e-41 174.1 226 39.4
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 4.5e-41 172.2 178 45.5
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 1.3e-40 170.6 199 45.7
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 1.7e-40 170.2 172 47.7
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 3.8e-40 169.1 180 44.4
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 5.0e-40 168.7 228 40.8
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 6.6e-40 168.3 191 45.0
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 5.6e-39 165.2 192 40.6
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 9.5e-39 164.5 220 39.5
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 9.5e-39 164.5 195 41.5
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 1.2e-38 164.1 180 45.0
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 2.1e-38 163.3 217 41.9
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 2.8e-38 162.9 195 41.5
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 3.6e-38 162.5 190 43.2
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 4.7e-38 162.2 220 38.6
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 6.1e-38 161.8 190 43.2
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 6.1e-38 161.8 190 43.2
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 8.0e-38 161.4 218 37.2
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 1.8e-37 160.2 179 44.1
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 1.8e-37 160.2 182 44.5
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 4.0e-37 159.1 178 43.8
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 6.8e-37 158.3 192 42.2
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 8.9e-37 157.9 196 38.3
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 8.9e-37 157.9 241 39.4
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 8.9e-37 157.9 182 44.0
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 2.0e-36 156.8 217 39.2
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 2.0e-36 156.8 237 39.7
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 3.4e-36 156.0 195 40.5
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 1.7e-35 153.7 180 46.1
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.7e-35 153.7 241 38.2
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 2.2e-35 153.3 175 42.9
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 2.9e-35 152.9 176 41.5
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 3.7e-35 152.5 175 43.4
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 6.4e-35 151.8 173 41.6
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 8.3e-35 151.4 169 42.0
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 1.1e-34 151.0 169 42.0
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.1e-34 151.0 169 42.0
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 1.1e-34 151.0 184 37.0
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 1.8e-34 150.2 213 36.6
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 2.4e-34 149.8 254 37.4
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 3.2e-34 149.4 169 41.4
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 4.6e-33 145.6 175 40.6
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 4.6e-33 145.6 225 33.8
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 4.6e-33 145.6 319 32.0
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 4.6e-33 145.6 177 43.5
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 3.9e-32 142.5 225 32.0
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 3.3e-31 139.4 186 38.7
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 9.5e-31 137.9 221 35.3
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 1.2e-30 137.5 238 34.9
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 4.0e-29 132.5 193 38.9
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 5.2e-29 132.1 190 38.9
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 2.9e-27 126.3 180 38.9
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 1.4e-26 124.0 219 34.7
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 4.6e-25 119.0 82 64.6
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 1.3e-24 117.5 123 49.6
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 6.8e-21 105.1 145 41.4
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 7.5e-20 101.7 139 37.4
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 9.8e-20 101.3 123 39.8
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 4.9e-19 99.0 78 53.8
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 7.3e-15 85.1 70 54.3
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 1.2e-14 84.3 112 33.9
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 2.3e-13 80.1 117 35.0
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 4.4e-12 75.9 91 36.3
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 5.8e-12 75.5 79 48.1
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 9.2e-10 68.2 64 56.2
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 3.0e-08 63.2 184 27.2
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 5.1e-08 62.4 68 47.1
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 1.9e-07 60.5 196 24.5


User provided reference genes

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