Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 1.1e-83 313.2 145 100.0
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 3.6e-63 245.0 140 80.7
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 1.1e-59 233.4 140 77.9
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 1.1e-59 233.4 140 77.9
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 3.0e-57 225.3 140 74.3
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 2.8e-55 218.8 140 72.9
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 8.7e-49 197.2 142 66.9
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 4.0e-38 161.8 138 59.4
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 1.9e-35 152.9 139 57.6
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 1.0e-33 147.1 139 51.8
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 8.7e-33 144.1 132 52.3
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 1.1e-32 143.7 138 55.8
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 1.5e-32 143.3 139 49.6
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 5.6e-32 141.4 141 56.0
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 5.6e-32 141.4 136 50.7
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 7.4e-32 141.0 139 48.9
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 1.6e-31 139.8 139 51.1
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 4.8e-31 138.3 138 50.0
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 8.1e-31 137.5 139 48.2
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 1.1e-30 137.1 139 49.6
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 1.1e-30 137.1 139 52.5
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 1.1e-30 137.1 139 48.9
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 1.1e-30 137.1 138 50.0
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 1.1e-30 137.1 124 54.8
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 1.8e-30 136.3 138 47.1
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 4.0e-30 135.2 139 48.2
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 6.9e-30 134.4 139 47.5
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 9.0e-30 134.0 118 55.9
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.2e-29 133.7 139 48.9
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.2e-29 133.7 139 48.9
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 1.2e-29 133.7 142 49.3
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 1.2e-29 133.7 139 47.5
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 3.4e-29 132.1 139 51.1
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 4.5e-29 131.7 139 48.9
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 5.8e-29 131.3 138 45.7
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 1.7e-28 129.8 138 44.9
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 2.2e-28 129.4 138 44.2
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 4.9e-28 128.3 140 47.9
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 4.9e-28 128.3 139 46.0
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 6.4e-28 127.9 139 48.9
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 6.4e-28 127.9 126 48.4
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 6.4e-28 127.9 139 48.2
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 1.9e-27 126.3 126 50.8
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.9e-27 126.3 126 50.8
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 1.9e-27 126.3 138 47.8
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 3.2e-27 125.6 139 46.0
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 4.2e-27 125.2 139 49.6
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 4.2e-27 125.2 126 50.0
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 5.5e-27 124.8 139 48.2
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 5.5e-27 124.8 121 49.6
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 6.0e-26 121.3 139 41.7
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 7.9e-26 120.9 138 45.7
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 1.0e-25 120.6 139 46.8
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 3.9e-25 118.6 139 46.0
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 6.7e-25 117.9 139 47.5
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 8.7e-25 117.5 141 44.7
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 1.5e-24 116.7 139 43.9
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 2.5e-24 115.9 139 43.9
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 3.3e-24 115.5 139 43.9
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 4.3e-24 115.2 126 46.8
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 4.3e-24 115.2 139 43.2
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 9.6e-24 114.0 119 45.4
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 1.3e-23 113.6 139 41.7
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 1.3e-23 113.6 139 42.4
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 2.1e-23 112.8 138 44.9
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 2.8e-23 112.5 139 46.0
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 3.7e-23 112.1 120 46.7
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 4.8e-23 111.7 138 44.2
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 1.4e-22 110.2 119 42.9
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 1.8e-22 109.8 139 42.4
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 4.0e-22 108.6 139 39.6
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 4.0e-22 108.6 139 42.4
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 6.9e-22 107.8 143 40.6
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 9.0e-22 107.5 139 43.2
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 1.5e-21 106.7 139 44.6
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 2.0e-21 106.3 142 40.8
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 3.4e-21 105.5 142 40.8
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 7.6e-21 104.4 135 40.7
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 7.6e-21 104.4 139 40.3
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 1.0e-20 104.0 121 43.0
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 1.0e-20 104.0 117 47.0
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 2.9e-20 102.4 135 43.7
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 3.8e-20 102.1 113 44.2
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 2.5e-19 99.4 98 46.9
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 2.5e-19 99.4 136 41.9
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 3.2e-19 99.0 146 38.4
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 5.5e-19 98.2 123 41.5
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 7.1e-19 97.8 149 36.9
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 2.1e-18 96.3 118 40.7
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 2.7e-18 95.9 145 36.6
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 2.3e-17 92.8 146 38.4
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 3.9e-17 92.0 93 46.2
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 3.9e-17 92.0 142 40.1
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 1.9e-16 89.7 146 35.6
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 2.5e-16 89.4 93 44.1
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 3.3e-16 89.0 154 35.1
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 2.2e-15 86.3 143 37.1
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 3.7e-15 85.5 145 34.5
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 3.7e-15 85.5 138 37.7
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 6.3e-15 84.7 139 33.8
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 1.4e-14 83.6 146 37.7
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 1.4e-14 83.6 142 37.3
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 3.1e-14 82.4 126 41.3
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 3.1e-14 82.4 126 41.3
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 4.1e-14 82.0 126 38.1
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 5.0e-12 75.1 143 32.2
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 6.5e-12 74.7 152 38.8
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 1.1e-11 73.9 131 37.4
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 1.4e-11 73.6 123 34.1
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 2.1e-10 69.7 131 36.6
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 2.1e-10 69.7 131 36.6
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 2.1e-10 69.7 131 36.6
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 2.1e-10 69.7 136 34.6
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 4.6e-10 68.6 131 36.6
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 1.0e-09 67.4 152 34.2
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 1.0e-09 67.4 131 36.6


User provided reference genes

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