Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G345.5 Capsicum annuum HOM05D006432 ORTHO05D008257 4.6e-56 221.1 119 100.0
CAN.G220.38 Capsicum annuum HOM05D006432 ORTHO05D008257 2.9e-10 68.9 43 83.7
Solyc09g090330.3 Solanum lycopersicum HOM05D006432 ORTHO05D008257 2.9e-10 68.9 43 83.7
Sopen09g033230 Solanum pennellii HOM05D006432 ORTHO05D008257 2.9e-10 68.9 43 83.7
PGSC0003DMG400017164 Solanum tuberosum HOM05D006432 ORTHO05D008257 2.9e-10 68.9 43 83.7
Duzib052G0458 Durio zibethinus HOM05D006432 ORTHO05D008257 5.5e-09 64.7 58 58.6
Nitab4.5_0000044g0560 Nicotiana tabacum HOM05D006432 ORTHO05D008257 7.2e-09 64.3 44 75.0
Nitab4.5_0000596g0040 Nicotiana tabacum HOM05D006432 ORTHO05D008257 7.2e-09 64.3 44 75.0
Peaxi162Scf00392g00732 Petunia axillaris HOM05D006432 ORTHO05D008257 3.6e-08 62.0 43 74.4
ClCG05G004210 Citrullus lanatus HOM05D006432 ORTHO05D008257 4.7e-08 61.6 43 69.8
Sed0005439 Sechium edule HOM05D006432 ORTHO05D008257 4.7e-08 61.6 43 69.8
Dinv29840 Davidia involucrata HOM05D006432 ORTHO05D008257 6.1e-08 61.2 50 64.0
Actinidia39914 Actinidia chinensis HOM05D006432 ORTHO05D008257 7.9e-08 60.8 44 70.5
MELO3C006407.2 Cucumis melo HOM05D006432 ORTHO05D008257 7.9e-08 60.8 43 69.8
CsaV3_3G011940 Cucumis sativus L. HOM05D006432 ORTHO05D008257 7.9e-08 60.8 43 69.8
MBI07_g31085_MAGBIO Magnolia biondii HOM05D006432 ORTHO05D008257 1.0e-07 60.5 43 69.8
AUR62002163 Chenopodium quinoa HOM05D006432 ORTHO05D008257 1.4e-07 60.1 48 64.6
QL06p019206 Quercus lobata HOM05D006432 ORTHO05D008257 1.4e-07 60.1 43 72.1
Actinidia11356 Actinidia chinensis HOM05D006432 ORTHO05D008257 1.8e-07 59.7 43 69.8
Cfa014742 Carpinus fangiana HOM05D006432 ORTHO05D008257 1.8e-07 59.7 43 69.8
Haze_11417 Corylus avellana HOM05D006432 ORTHO05D008257 1.8e-07 59.7 43 69.8
Lsat_1_v5_gn_2_40021 Lactuca sativa HOM05D006432 ORTHO05D008257 1.8e-07 59.7 43 69.8
Prupe.1G042200 Prunus persica HOM05D006432 ORTHO05D008257 1.8e-07 59.7 43 69.8
Ah.13g072590 Amaranthus hybridus HOM05D006432 ORTHO05D008257 2.3e-07 59.3 44 65.9
Migut.N00285 Erythranthe guttata HOM05D006432 ORTHO05D008257 2.3e-07 59.3 43 67.4
FAN17G1327 Fragaria x ananassa HOM05D006432 ORTHO05D008257 2.3e-07 59.3 43 69.8
GSVIVG01027851001 Vitis vinifera HOM05D006432 ORTHO05D008257 2.3e-07 59.3 43 69.8
FAN22G0893 Fragaria x ananassa HOM05D006432 ORTHO05D008257 3.0e-07 58.9 43 67.4
CiPaw.01G181700 Carya illinoinensis HOM05D006432 ORTHO05D008257 3.9e-07 58.5 43 67.4
FvH4_4g04000 Fragaria vesca HOM05D003789 ORTHO05D004158 3.9e-07 58.5 43 67.4
FAN12G0128 Fragaria x ananassa HOM05D006432 ORTHO05D008257 3.9e-07 58.5 43 67.4
Hma1.2p1_0385F.1_g141230 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 3.9e-07 58.5 43 69.8
Hma1.2p1_0385F.1_g141240 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 3.9e-07 58.5 43 69.8
PGR031G2997 Punica granatum HOM05D006432 ORTHO05D008257 3.9e-07 58.5 43 67.4
RcHm_v2.0_Chr4g0394281 Rosa chinensis HOM05D006432 ORTHO05D008257 3.9e-07 58.5 43 69.8
AUR62015546 Chenopodium quinoa HOM05D006432 ORTHO05D008257 5.1e-07 58.2 43 67.4
Phvul.010G070111 Phaseolus vulgaris HOM05D006432 ORTHO05D008257 5.1e-07 58.2 43 69.8
Lalb_Chr21g0312161 Lupinus albus HOM05D006432 ORTHO05D008257 6.7e-07 57.8 43 65.1
Nn3g19719 Nelumbo nucifera HOM05D006432 ORTHO05D008257 6.7e-07 57.8 43 67.4
Rhsim02G0041500 Rhododendron simsii HOM05D006432 ORTHO05D008257 6.7e-07 57.8 44 68.2
VMungo0720G1276 Vigna mungo HOM05D006432 ORTHO05D008257 6.7e-07 57.8 43 69.8
CSS0006599 Camellia sinensis var. sinensis HOM05D006432 ORTHO05D008257 8.8e-07 57.4 68 50.0
Cpa.g.sc44.33 Carica papaya HOM05D006432 ORTHO05D008257 8.8e-07 57.4 43 69.8
Glyma.20G207100 Glycine max HOM05D006432 ORTHO05D008257 8.8e-07 57.4 43 67.4
Oeu055241.1 Olea europaea HOM05D000508 ORTHO05D000371 8.8e-07 57.4 43 65.1
Hund11907 Selenicereus undatus HOM05D006432 ORTHO05D008257 8.8e-07 57.4 41 68.3
vmacro15458 Vaccinium macrocarpon HOM05D006432 ORTHO05D008257 8.8e-07 57.4 43 72.1
MSTRG.9882 Avicennia marina HOM05D006432 ORTHO05D008257 1.1e-06 57.0 43 69.8
Lalb_Chr06g0169201 Lupinus albus HOM05D006432 ORTHO05D008257 1.1e-06 57.0 43 65.1
TWI73G0471 Tripterygium wilfordii HOM05D006432 ORTHO05D008257 1.1e-06 57.0 43 62.8
HPP92_005402 Vanilla planifolia HOM05D006432 ORTHO05D008257 1.1e-06 57.0 42 71.4
Thecc.04G259000 Theobroma cacao HOM05D006432 ORTHO05D008257 1.5e-06 56.6 43 65.1
TPR.G10084 Trifolium pratense HOM05D006432 ORTHO05D008257 1.5e-06 56.6 43 67.4
Lj3A686T58 Lonicera japonica HOM05D006432 ORTHO05D008257 2.0e-06 56.2 44 63.6
Carub.0003s2366 Capsella rubella HOM05D006432 ORTHO05D008257 2.6e-06 55.8 43 67.4
MD13G1216500 Malus domestica HOM05D006432 ORTHO05D008257 2.6e-06 55.8 43 65.1
Sc13g0005860 Simmondsia chinensis HOM05D006432 ORTHO05D008257 2.6e-06 55.8 43 65.1
ECA240G3223 Erigeron canadensis HOM05D002023 ORTHO05D002049 3.3e-06 55.5 43 62.8
Gohir.A09G228800 Gossypium hirsutum HOM05D006432 ORTHO05D008257 3.3e-06 55.5 41 65.9
Gohir.D09G229900 Gossypium hirsutum HOM05D006432 ORTHO05D008257 3.3e-06 55.5 41 65.9
Gorai.006G252600 Gossypium raimondii HOM05D006432 ORTHO05D008257 3.3e-06 55.5 41 65.9
Atru.chr4.2005 Acer truncatum HOM05D006432 ORTHO05D008257 5.7e-06 54.7 43 67.4
EL10Ac3g04982 Beta vulgaris HOM05D006432 ORTHO05D008257 5.7e-06 54.7 43 67.4
CANSAT78G0744 Cannabis sativa HOM05D006432 ORTHO05D008257 5.7e-06 54.7 43 62.8
Ciclev10007095m.g Citrus clementina HOM05D006432 ORTHO05D008257 5.7e-06 54.7 43 65.1
Ca_09849_v3 Cicer arietinum L. HOM05D006432 ORTHO05D008257 7.4e-06 54.3 43 65.1
COL.COLO4_15916 Corchorus olitorius HOM05D006432 ORTHO05D008257 7.4e-06 54.3 43 67.4
HanXRQChr14g0434951 Helianthus annuus HOM05D006432 ORTHO05D008257 7.4e-06 54.3 43 60.5
Manes.15G043100 Manihot esculenta HOM05D006432 ORTHO05D008257 7.4e-06 54.3 43 65.1
Dinv27072 Davidia involucrata HOM05D006432 ORTHO05D008257 9.7e-06 53.9 43 65.1
Eucgr.H00144 Eucalyptus grandis HOM05D006432 ORTHO05D008257 9.7e-06 53.9 44 59.1


User provided reference genes

Program Settings