Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G34.10 Capsicum annuum HOM05D003617 ORTHO05D010478 5.5e-83 310.8 149 100.0
CAN.G68.7 Capsicum annuum HOM05D003617 ORTHO05D010478 5.6e-43 177.9 99 88.9
CAN.G108.56 Capsicum annuum HOM05D003617 ORTHO05D010478 5.8e-40 167.9 99 81.8
CAN.G1362.2 Capsicum annuum HOM05D003617 ORTHO05D010478 1.3e-39 166.8 98 83.7
CAN.G370.37 Capsicum annuum HOM05D003617 ORTHO05D010478 1.1e-38 163.7 103 76.7
CAN.G1525.6 Capsicum annuum HOM05D000995 ORTHO05D007165 7.3e-27 124.4 212 37.3
CAN.G27.12 Capsicum annuum HOM05D000995 ORTHO05D000638 3.1e-25 119.0 155 46.5
CAN.G41.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.2e-24 117.1 78 73.1
Nitab4.5_0000095g0090 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.4e-24 115.2 146 44.5
Sopen05g021300 Solanum pennellii HOM05D000995 ORTHO05D012246 1.4e-22 110.2 148 41.2
Sopen11g010720 Solanum pennellii HOM05D003617 ORTHO05D007165 5.1e-20 101.7 220 31.8
CAN.G1445.3 Capsicum annuum HOM05D003617 ORTHO05D010478 8.1e-18 94.4 119 45.4
PGSC0003DMG400012065 Solanum tuberosum HOM05D003617 ORTHO05D010478 7.6e-16 87.8 118 43.2
PGSC0003DMG400045242 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.2e-15 86.3 118 41.5
Nitab4.5_0024231g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.9e-15 85.9 93 50.5
PGSC0003DMG400044879 Solanum tuberosum HOM05D000995 ORTHO05D001773 6.4e-15 84.7 110 42.7
PGSC0003DMG400042344 Solanum tuberosum HOM05D000995 ORTHO05D010478 8.4e-15 84.3 117 41.9
Nitab4.5_0000048g0120 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.4e-14 83.6 93 48.4
Nitab4.5_0001586g0180 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.4e-14 83.6 150 37.3
CAN.G1658.3 Capsicum annuum HOM05D003617 ORTHO05D010478 2.4e-14 82.8 119 42.9
Nitab4.5_0000109g0010 Nicotiana tabacum HOM05D000995 ORTHO05D010478 3.2e-14 82.4 115 41.7
Nitab4.5_0003882g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 5.4e-14 81.6 155 38.7
Nitab4.5_0022539g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 5.4e-14 81.6 91 51.6
Peaxi162Scf00991g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 5.4e-14 81.6 147 34.0
Nitab4.5_0002555g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.1e-14 81.3 93 50.5
CAN.G626.3 Capsicum annuum HOM05D003617 ORTHO05D010478 9.3e-14 80.9 94 45.7
Nitab4.5_0000836g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.3e-14 80.9 86 51.2
Nitab4.5_0000423g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.2e-13 80.5 118 41.5
CAN.G108.23 Capsicum annuum HOM05D003617 ORTHO05D010478 2.1e-13 79.7 119 41.2
Nitab4.5_0000300g0220 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.1e-13 79.7 86 52.3
CAN.G275.8 Capsicum annuum HOM05D003617 ORTHO05D010478 2.7e-13 79.3 122 41.0
CAN.G474.5 Capsicum annuum HOM05D001802 ORTHO05D010478 3.5e-13 79.0 55 67.3
CAN.G1329.39 Capsicum annuum HOM05D003617 ORTHO05D010478 4.6e-13 78.6 119 38.7
Nitab4.5_0005533g0020 Nicotiana tabacum HOM05D003617 ORTHO05D007165 6.0e-13 78.2 90 47.8
Nitab4.5_0004315g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 7.9e-13 77.8 112 42.0
Sopen12g026610 Solanum pennellii HOM05D003617 ORTHO05D010478 7.9e-13 77.8 112 42.0
Nitab4.5_0001101g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.0e-12 77.4 139 35.3
Nitab4.5_0017311g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.0e-12 77.4 91 47.3
PGSC0003DMG400044625 Solanum tuberosum HOM05D003617 ORTHO05D010478 1.0e-12 77.4 94 44.7
CAN.G908.5 Capsicum annuum HOM05D003617 ORTHO05D010478 1.8e-12 76.6 111 40.5
Nitab4.5_0001081g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 1.8e-12 76.6 84 50.0
CAN.G1323.7 Capsicum annuum HOM05D003617 ORTHO05D010478 3.0e-12 75.9 103 43.7
Nitab4.5_0003317g0020 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.0e-12 75.9 86 50.0
Sopen02g010350 Solanum pennellii HOM05D003617 ORTHO05D010478 3.0e-12 75.9 108 39.8
Nitab4.5_0003317g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.9e-12 75.5 91 49.5
Nitab4.5_0005492g0060 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.9e-12 75.5 86 47.7
PGSC0003DMG400007485 Solanum tuberosum HOM05D000995 ORTHO05D001773 5.1e-12 75.1 150 36.7
Sopen05g012010 Solanum pennellii HOM05D000002 ORTHO05D010478 6.7e-12 74.7 118 38.1
PGSC0003DMG400042314 Solanum tuberosum HOM05D003617 ORTHO05D007165 8.7e-12 74.3 110 38.2
CAN.G884.20 Capsicum annuum HOM05D000995 ORTHO05D001773 1.1e-11 73.9 51 64.7
Sopen06g006570 Solanum pennellii HOM05D000995 ORTHO05D002620 1.1e-11 73.9 227 26.9
CAN.G135.3 Capsicum annuum HOM05D003617 ORTHO05D010478 1.5e-11 73.6 104 39.4
PGSC0003DMG400040544 Solanum tuberosum HOM05D003617 ORTHO05D007165 1.5e-11 73.6 65 55.4
PGSC0003DMG400046252 Solanum tuberosum HOM05D000995 ORTHO05D010478 1.5e-11 73.6 121 40.5
CAN.G626.1 Capsicum annuum HOM05D003617 ORTHO05D010478 1.9e-11 73.2 111 39.6
Nitab4.5_0022539g0010 Nicotiana tabacum HOM05D003617 ORTHO05D010478 2.5e-11 72.8 86 48.8
Nitab4.5_0011017g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 9.6e-11 70.9 80 48.8
PGSC0003DMG400043386 Solanum tuberosum HOM05D003617 ORTHO05D010478 9.6e-11 70.9 84 47.6
Sopen01g028500 Solanum pennellii HOM05D003617 ORTHO05D000001 1.3e-10 70.5 65 52.3
Peaxi162Scf00148g00142 Petunia axillaris HOM05D003617 ORTHO05D007165 2.1e-10 69.7 134 32.8
Nitab4.5_0005517g0050 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.2e-10 68.2 64 54.7
Nitab4.5_0008204g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 6.2e-10 68.2 143 32.9
Nitab4.5_0006184g0010 Nicotiana tabacum HOM05D003617 ORTHO05D007165 1.1e-09 67.4 86 46.5
PGSC0003DMG400003176 Solanum tuberosum HOM05D003617 ORTHO05D010478 2.4e-09 66.2 111 35.1
Nitab4.5_0002671g0080 Nicotiana tabacum HOM05D003617 ORTHO05D010478 3.1e-09 65.9 91 44.0
Nitab4.5_0000263g0210 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.0e-09 65.5 84 46.4
Nitab4.5_0000481g0030 Nicotiana tabacum HOM05D003617 ORTHO05D010478 4.0e-09 65.5 109 37.6
CAN.G587.67 Capsicum annuum HOM05D003617 ORTHO05D010478 6.9e-09 64.7 66 50.0
PGSC0003DMG400015099 Solanum tuberosum HOM05D000995 ORTHO05D007165 9.0e-09 64.3 111 35.1
Nitab4.5_0002397g0050 Nicotiana tabacum HOM05D003617 ORTHO05D007165 2.6e-08 62.8 64 48.4
Nitab4.5_0000004g0300 Nicotiana tabacum HOM05D003617 ORTHO05D007165 3.4e-08 62.4 77 45.5
Peaxi162Scf00466g00012 Petunia axillaris HOM05D003617 ORTHO05D007165 5.8e-08 61.6 114 33.3
Nitab4.5_0001939g0070 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.9e-08 60.8 77 44.2
Nitab4.5_0004914g0040 Nicotiana tabacum HOM05D003617 ORTHO05D010478 9.9e-08 60.8 93 40.9
Peaxi162Scf00883g00081 Petunia axillaris HOM05D003617 ORTHO05D007165 4.9e-07 58.5 66 45.5
PGSC0003DMG400034797 Solanum tuberosum HOM05D000995 ORTHO05D010478 1.1e-06 57.4 111 32.4
PGSC0003DMG400023003 Solanum tuberosum HOM05D000995 ORTHO05D000638 9.3e-06 54.3 35 60.0


User provided reference genes

Program Settings