Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1918.2 Capsicum annuum HOM05D000167 ORTHO05D016875 4.0e-28 127.5 69 100.0
CAN.G339.8 Capsicum annuum HOM05D000167 ORTHO05D016875 4.0e-28 127.5 69 100.0
CAN.G732.24 Capsicum annuum HOM05D000167 ORTHO05D016875 4.0e-28 127.5 69 100.0
CAN.G1918.3 Capsicum annuum HOM05D000167 ORTHO05D016875 4.7e-21 104.0 66 84.8
Peaxi162Scf00047g01421 Petunia axillaris HOM05D000167 ORTHO05D000994 2.2e-18 95.1 64 81.2
Nitab4.5_0000123g0490 Nicotiana tabacum HOM05D000167 ORTHO05D000994 6.6e-15 83.6 65 73.8
Nitab4.5_0009571g0010 Nicotiana tabacum HOM05D000167 ORTHO05D000994 7.3e-14 80.1 67 70.1
Nitab4.5_0005733g0030 Nicotiana tabacum HOM05D000167 ORTHO05D000994 2.1e-13 78.6 67 70.1
Nitab4.5_0003185g0040 Nicotiana tabacum HOM05D000167 ORTHO05D000994 5.3e-12 73.9 68 61.8
Nitab4.5_0010357g0020 Nicotiana tabacum HOM05D000167 ORTHO05D000994 3.4e-11 71.2 66 57.6
CAN.G554.8 Capsicum annuum HOM05D000565 ORTHO05D016875 9.9e-11 69.7 52 75.0
Nitab4.5_0011086g0020 Nicotiana tabacum HOM05D000167 ORTHO05D000994 1.3e-10 69.3 60 68.3
TAR369G0262 Trochodendron aralioides HOM05D000167 ORTHO05D000994 2.9e-10 68.2 67 52.2
Ciclev10033610m.g Citrus clementina HOM05D000167 ORTHO05D000994 3.8e-10 67.8 67 52.2
Hma1.2p1_0761F.1_g214300 Hydrangea macrophylla HOM05D000167 ORTHO05D000994 8.4e-10 66.6 67 55.2
Lj2C28T3 Lonicera japonica HOM05D000167 ORTHO05D000994 1.1e-09 66.2 66 54.5
TAR369G0021 Trochodendron aralioides HOM05D000167 ORTHO05D000994 2.4e-09 65.1 67 52.2
TAR369G1003 Trochodendron aralioides HOM05D000167 ORTHO05D000994 2.4e-09 65.1 67 52.2
Nitab4.5_0002986g0010 Nicotiana tabacum HOM05D000167 ORTHO05D000994 3.2e-09 64.7 68 57.4
Dinv20817 Davidia involucrata HOM05D001211 ORTHO05D001084 4.2e-09 64.3 67 50.7
CiPaw.13G037100 Carya illinoinensis HOM05D000167 ORTHO05D000994 5.4e-09 63.9 67 52.2
Nitab4.5_0000829g0110 Nicotiana tabacum HOM05D000167 ORTHO05D000994 5.4e-09 63.9 68 57.4
TAR633G1239 Trochodendron aralioides HOM05D000167 ORTHO05D000994 5.4e-09 63.9 67 49.3
CSS0019095 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 7.1e-09 63.5 67 53.7
Dinv06793 Davidia involucrata HOM05D000167 ORTHO05D000994 7.1e-09 63.5 67 50.7
TAR623G1085 Trochodendron aralioides HOM05D000167 ORTHO05D000994 9.3e-09 63.2 67 50.7
CSS0029726 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 2.1e-08 62.0 67 50.7
Rhsim03G0105300 Rhododendron simsii HOM05D000167 ORTHO05D000994 2.1e-08 62.0 71 53.5
TAR623G1479 Trochodendron aralioides HOM05D000167 ORTHO05D000994 2.1e-08 62.0 67 50.7
CSS0007255 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 2.7e-08 61.6 67 52.2
CSS0019479 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 2.7e-08 61.6 67 52.2
CSS0044253 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 2.7e-08 61.6 67 52.2
DCAR_006360 Daucus carota HOM05D000167 ORTHO05D000994 2.7e-08 61.6 67 50.7
Nn6g35017 Nelumbo nucifera HOM05D000167 ORTHO05D000994 2.7e-08 61.6 66 51.5
TAR633G0433 Trochodendron aralioides HOM05D000167 ORTHO05D000994 2.7e-08 61.6 67 47.8
CSS0007733 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 3.5e-08 61.2 67 52.2
Lj2A29T75 Lonicera japonica HOM05D000167 ORTHO05D000994 3.5e-08 61.2 67 49.3
Lj2A29T77 Lonicera japonica HOM05D000167 ORTHO05D000994 3.5e-08 61.2 67 49.3
Lj2A29T79 Lonicera japonica HOM05D000167 ORTHO05D000994 3.5e-08 61.2 67 49.3
Nitab4.5_0008853g0010 Nicotiana tabacum HOM05D000167 ORTHO05D000994 3.5e-08 61.2 53 58.5
Rhsim09G0143500 Rhododendron simsii HOM05D000167 ORTHO05D000994 3.5e-08 61.2 68 48.5
TAR623G1601 Trochodendron aralioides HOM05D000167 ORTHO05D000994 3.5e-08 61.2 67 47.8
CSS0020394 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 4.6e-08 60.8 67 50.7
DCAR_006368 Daucus carota HOM05D000167 ORTHO05D000994 4.6e-08 60.8 67 50.7
Nitab4.5_0002318g0010 Nicotiana tabacum HOM05D000167 ORTHO05D000994 4.6e-08 60.8 67 49.3
CSS0000389 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 6.0e-08 60.5 67 50.7
CAN.G556.5 Capsicum annuum HOM05D000167 ORTHO05D016875 6.0e-08 60.5 69 55.1
DCAR_006364 Daucus carota HOM05D000167 ORTHO05D000994 6.0e-08 60.5 67 50.7
GSVIVG01026464001 Vitis vinifera HOM05D000167 ORTHO05D000994 6.0e-08 60.5 66 50.0
Rhsim03G0105200 Rhododendron simsii HOM05D000167 ORTHO05D000994 7.9e-08 60.1 64 50.0
Eucgr.J01007 Eucalyptus grandis HOM05D000167 ORTHO05D000994 1.0e-07 59.7 67 46.3
Potri.008G024900 Populus trichocarpa HOM05D000167 ORTHO05D000994 1.0e-07 59.7 66 47.0
Rhsim09G0143600 Rhododendron simsii HOM05D000167 ORTHO05D000994 1.0e-07 59.7 68 47.1
vmacro10294 Vaccinium macrocarpon HOM05D000167 ORTHO05D000994 1.0e-07 59.7 68 45.6
Hma1.2p1_0352F.1_g133090 Hydrangea macrophylla HOM05D000167 ORTHO05D000994 1.3e-07 59.3 67 49.3
vmacro10293 Vaccinium macrocarpon HOM05D000167 ORTHO05D000994 1.8e-07 58.9 68 45.6
CSS0015472 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 2.3e-07 58.5 67 47.8
PGSC0003DMG400022657 Solanum tuberosum HOM05D000167 ORTHO05D000994 2.3e-07 58.5 69 53.6
RhsimUnG0061400 Rhododendron simsii HOM05D000167 ORTHO05D000994 3.0e-07 58.2 67 46.3
Ciclev10033373m.g Citrus clementina HOM05D000167 ORTHO05D000994 3.9e-07 57.8 67 43.3
Lj2C28T2 Lonicera japonica HOM05D000167 ORTHO05D000994 3.9e-07 57.8 67 47.8
PSO443G0003 Papaver somniferum HOM05D000167 ORTHO05D000994 3.9e-07 57.8 67 44.8
Cc10_g13040 Coffea canephora HOM05D000167 ORTHO05D000994 5.1e-07 57.4 69 46.4
Nitab4.5_0002318g0030 Nicotiana tabacum HOM05D000167 ORTHO05D000994 5.1e-07 57.4 67 46.3
PSO443G0006 Papaver somniferum HOM05D000167 ORTHO05D000994 5.1e-07 57.4 67 46.3
QL04p006680 Quercus lobata HOM05D000167 ORTHO05D000994 5.1e-07 57.4 67 52.2
QL04p007917 Quercus lobata HOM05D000167 ORTHO05D000994 5.1e-07 57.4 67 52.2
Solyc11g007370.3 Solanum lycopersicum HOM05D000167 ORTHO05D000994 5.1e-07 57.4 67 49.3
Eucgr.J01009 Eucalyptus grandis HOM05D000167 ORTHO05D000994 6.7e-07 57.0 67 46.3
Hma1.2p1_1273F.1_g271910 Hydrangea macrophylla HOM05D000167 ORTHO05D000994 6.7e-07 57.0 68 48.5
Rhsim09G0143700 Rhododendron simsii HOM05D000167 ORTHO05D000994 6.7e-07 57.0 68 44.1
Cc10_g13030 Coffea canephora HOM05D000167 ORTHO05D000994 8.7e-07 56.6 69 46.4
Cc10_g13070 Coffea canephora HOM05D000167 ORTHO05D000994 8.7e-07 56.6 69 46.4
MELO3C014697.2 Cucumis melo HOM05D000167 ORTHO05D000994 8.7e-07 56.6 67 44.8
Peaxi162Scf00003g04132 Petunia axillaris HOM05D000167 ORTHO05D000994 8.7e-07 56.6 68 50.0
Peaxi162Scf00244g00911 Petunia axillaris HOM05D000167 ORTHO05D000994 8.7e-07 56.6 67 44.8
Peaxi162Scf00386g00926 Petunia axillaris HOM05D000167 ORTHO05D000994 8.7e-07 56.6 68 51.5
Peaxi162Scf03917g00008 Petunia axillaris HOM05D000167 ORTHO05D000994 8.7e-07 56.6 68 50.0
Solyc01g067350.4 Solanum lycopersicum HOM05D000167 ORTHO05D000994 8.7e-07 56.6 69 52.2
Solyc11g007480.1 Solanum lycopersicum HOM05D000167 ORTHO05D000994 8.7e-07 56.6 63 46.0
PGSC0003DMG400019483 Solanum tuberosum HOM05D000167 ORTHO05D000994 8.7e-07 56.6 67 44.8
Lj2C28T1 Lonicera japonica HOM05D000167 ORTHO05D000994 1.1e-06 56.2 67 46.3
Oeu026568.1 Olea europaea HOM05D000167 ORTHO05D000994 1.1e-06 56.2 64 50.0
Peaxi162Scf00565g00002 Petunia axillaris HOM05D000167 ORTHO05D000994 1.1e-06 56.2 68 44.1
QL04p042386 Quercus lobata HOM05D000167 ORTHO05D000994 1.1e-06 56.2 67 50.7
QL04p042468 Quercus lobata HOM05D000167 ORTHO05D000994 1.1e-06 56.2 67 50.7
Rhsim09G0143400 Rhododendron simsii HOM05D000167 ORTHO05D000994 1.1e-06 56.2 68 47.1
PGSC0003DMG400008181 Solanum tuberosum HOM05D000167 ORTHO05D000994 1.1e-06 56.2 68 48.5
TWI15G0823 Tripterygium wilfordii HOM05D000167 ORTHO05D000994 1.1e-06 56.2 67 47.8
CSS0002110 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 1.5e-06 55.8 64 43.8
CSS0008350 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 1.5e-06 55.8 67 47.8
CSS0029555 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 1.5e-06 55.8 64 43.8
CSS0044625 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 1.5e-06 55.8 64 43.8
Cc01_g09650 Coffea canephora HOM05D000167 ORTHO05D000994 1.5e-06 55.8 67 46.3
Cc11_g06150 Coffea canephora HOM05D000167 ORTHO05D000994 1.5e-06 55.8 68 42.6
Nitab4.5_0001569g0010 Nicotiana tabacum HOM05D000167 ORTHO05D000994 1.5e-06 55.8 67 43.3
Rhsim09G0143900 Rhododendron simsii HOM05D000167 ORTHO05D000994 1.5e-06 55.8 67 46.3
Rhsim09G0144000 Rhododendron simsii HOM05D000167 ORTHO05D000994 1.5e-06 55.8 67 46.3
CSS0033369 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 1.9e-06 55.5 64 43.8
Peaxi162Scf00024g00066 Petunia axillaris HOM05D000167 ORTHO05D000994 1.9e-06 55.5 68 48.5
Sopen01g029230 Solanum pennellii HOM05D000167 ORTHO05D000994 1.9e-06 55.5 68 52.9
Sopen09g032530 Solanum pennellii HOM05D000167 ORTHO05D000994 1.9e-06 55.5 67 44.8
Sopen11g003320 Solanum pennellii HOM05D000167 ORTHO05D000994 1.9e-06 55.5 60 46.7
Ciclev10030045m.g Citrus clementina HOM05D000167 ORTHO05D000994 2.5e-06 55.1 68 44.1
Cc02_g10040 Coffea canephora HOM05D000167 ORTHO05D000994 2.5e-06 55.1 66 43.9
Eucgr.J01015 Eucalyptus grandis HOM05D000167 ORTHO05D000994 2.5e-06 55.1 67 44.8
Actinidia19718 Actinidia chinensis HOM05D000167 ORTHO05D000994 3.3e-06 54.7 67 44.8
CSS0025403 Camellia sinensis var. sinensis HOM05D000167 ORTHO05D000994 3.3e-06 54.7 67 46.3
Oeu030497.1 Olea europaea HOM05D000167 ORTHO05D000994 3.3e-06 54.7 67 43.3
QL04p042430 Quercus lobata HOM05D000167 ORTHO05D000994 3.3e-06 54.7 67 49.3
Sopen11g003260 Solanum pennellii HOM05D000167 ORTHO05D000994 3.3e-06 54.7 67 46.3
PGSC0003DMG400020897 Solanum tuberosum HOM05D000167 ORTHO05D000994 3.3e-06 54.7 64 42.2
PGSC0003DMG400027338 Solanum tuberosum HOM05D000167 ORTHO05D000994 3.3e-06 54.7 66 45.5
PGSC0003DMG400043363 Solanum tuberosum HOM05D000167 ORTHO05D000994 3.3e-06 54.7 66 45.5
CiPaw.14G029300 Carya illinoinensis HOM05D000167 ORTHO05D000994 4.3e-06 54.3 67 44.8
Cc11_g06140 Coffea canephora HOM05D000167 ORTHO05D000994 4.3e-06 54.3 68 44.1
Dinv20812 Davidia involucrata HOM05D000167 ORTHO05D000994 4.3e-06 54.3 67 43.3
Lsat_1_v5_gn_9_34661 Lactuca sativa HOM05D000167 ORTHO05D000994 4.3e-06 54.3 67 44.8
Lj2A29T78 Lonicera japonica HOM05D000167 ORTHO05D000994 4.3e-06 54.3 66 45.5
Lj2C29G4 Lonicera japonica HOM05D000167 ORTHO05D000994 4.3e-06 54.3 66 45.5
Peaxi162Scf03648g00019 Petunia axillaris HOM05D000167 ORTHO05D000994 4.3e-06 54.3 68 48.5
PGSC0003DMG400017250 Solanum tuberosum HOM05D000167 ORTHO05D000994 4.3e-06 54.3 67 44.8
vmacro10280 Vaccinium macrocarpon HOM05D000167 ORTHO05D000994 4.3e-06 54.3 67 44.8
CAN.G894.2 Capsicum annuum HOM05D000167 ORTHO05D016875 5.6e-06 53.9 67 44.8
Migut.F00894 Erythranthe guttata HOM05D000167 ORTHO05D000994 5.6e-06 53.9 65 46.2
Manes.07G090000 Manihot esculenta HOM05D000167 ORTHO05D000994 5.6e-06 53.9 67 43.3
Nitab4.5_0000962g0020 Nicotiana tabacum HOM05D000167 ORTHO05D000994 5.6e-06 53.9 68 48.5
PSO384G2162 Papaver somniferum HOM05D000100 ORTHO05D000994 5.6e-06 53.9 67 43.3
Peaxi162Scf00421g00420 Petunia axillaris HOM05D000167 ORTHO05D000994 5.6e-06 53.9 67 43.3
PGSC0003DMG400017191 Solanum tuberosum HOM05D000167 ORTHO05D000994 5.6e-06 53.9 67 43.3
PGSC0003DMG400017249 Solanum tuberosum HOM05D000167 ORTHO05D000994 5.6e-06 53.9 67 43.3
TWI15G0154 Tripterygium wilfordii HOM05D000167 ORTHO05D000994 5.6e-06 53.9 67 46.3
Eucgr.J01013 Eucalyptus grandis HOM05D000167 ORTHO05D000994 7.4e-06 53.5 67 46.3
MD07G1068000 Malus domestica HOM05D000167 ORTHO05D000994 7.4e-06 53.5 66 48.5
Nitab4.5_0002878g0040 Nicotiana tabacum HOM05D000167 ORTHO05D000994 7.4e-06 53.5 67 44.8
Nitab4.5_0008756g0010 Nicotiana tabacum HOM05D000167 ORTHO05D000994 7.4e-06 53.5 67 41.8
Oeu061772.2 Olea europaea HOM05D000167 ORTHO05D000994 7.4e-06 53.5 67 46.3
Solyc04g081830.1 Solanum lycopersicum HOM05D000167 ORTHO05D000994 7.4e-06 53.5 67 43.3
Solyc08g150105.1 Solanum lycopersicum HOM05D000167 ORTHO05D000994 7.4e-06 53.5 61 50.8
Sopen04g035460 Solanum pennellii HOM05D000167 ORTHO05D000994 7.4e-06 53.5 67 43.3
Sopen11g003340 Solanum pennellii HOM05D000167 ORTHO05D000994 7.4e-06 53.5 67 44.8
Nitab4.5_0002318g0040 Nicotiana tabacum HOM05D000167 ORTHO05D016875 9.6e-06 53.1 63 44.4
PSO443G0040 Papaver somniferum HOM05D000167 ORTHO05D000994 9.6e-06 53.1 67 46.3


User provided reference genes

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