Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G339.1 Capsicum annuum HOM05D005645 ORTHO05D007156 2.2e-170 602.1 279 100.0
CAN.G1628.1 Capsicum annuum HOM05D005645 ORTHO05D007156 2.8e-136 488.8 260 89.6
Sopen09g029900 Solanum pennellii HOM05D005645 ORTHO05D007156 1.6e-120 436.4 281 74.7
PGSC0003DMG400011401 Solanum tuberosum HOM05D005645 ORTHO05D007156 1.1e-119 433.7 265 77.7
Solyc09g075080.3 Solanum lycopersicum HOM05D005645 ORTHO05D007156 1.7e-117 426.4 281 73.3
Nitab4.5_0001879g0020 Nicotiana tabacum HOM05D005645 ORTHO05D007156 2.5e-113 412.5 268 75.0
Nitab4.5_0008207g0010 Nicotiana tabacum HOM05D005645 ORTHO05D007156 2.8e-112 409.1 268 73.9
Peaxi162Scf00001g00452 Petunia axillaris HOM05D005645 ORTHO05D007156 1.2e-110 403.7 267 73.8
Cc01_g20770 Coffea canephora HOM05D005645 ORTHO05D007156 2.4e-103 379.4 266 70.7
Dinv19699 Davidia involucrata HOM05D005645 ORTHO05D007156 2.7e-99 365.9 275 65.5
CSS0005125 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 3.9e-98 362.1 287 62.7
Hma1.2p1_0491F.1_g164480 Hydrangea macrophylla HOM05D005645 ORTHO05D007156 4.0e-95 352.1 265 66.4
Aqoxy2G02954 Aquilegia oxysepala HOM05D005645 ORTHO05D007156 2.0e-94 349.7 285 59.3
SalBow3G0280 Salvia bowleyana HOM05D005645 ORTHO05D007156 4.5e-94 348.6 264 66.7
Atru.chr5.1154 Acer truncatum HOM05D005645 ORTHO05D007156 1.3e-93 347.1 263 65.4
Duzib138G1290 Durio zibethinus HOM05D005645 ORTHO05D007156 2.2e-93 346.3 268 63.8
RcHm_v2.0_Chr6g0293871 Rosa chinensis HOM05D005645 ORTHO05D007156 2.2e-93 346.3 267 65.9
COL.COLO4_23354 Corchorus olitorius HOM05D005645 ORTHO05D007156 6.5e-93 344.7 258 65.1
Migut.D00211 Erythranthe guttata HOM05D005645 ORTHO05D007156 1.1e-92 344.0 272 63.2
DCAR_002826 Daucus carota HOM05D005645 ORTHO05D007156 4.2e-92 342.0 274 60.9
Lj2P1193T28 Lonicera japonica HOM05D005645 ORTHO05D007156 9.3e-92 340.9 282 63.1
Manes.05G062500 Manihot esculenta HOM05D005645 ORTHO05D007156 9.3e-92 340.9 260 64.6
Duzib133G0671 Durio zibethinus HOM05D005645 ORTHO05D007156 1.2e-91 340.5 268 63.1
Ciclev10021114m.g Citrus clementina HOM05D005645 ORTHO05D007156 2.7e-91 339.3 271 63.5
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 1.0e-90 337.4 274 62.8
Thecc.01G299500 Theobroma cacao HOM05D005645 ORTHO05D007156 1.0e-90 337.4 264 63.6
Gohir.D08G085100 Gossypium hirsutum HOM05D005645 ORTHO05D007156 6.7e-90 334.7 265 63.4
Gohir.A08G075600 Gossypium hirsutum HOM05D005645 ORTHO05D007156 8.7e-90 334.3 265 63.4
PGR119G1100 Punica granatum HOM05D005645 ORTHO05D007156 3.3e-89 332.4 264 61.0
Gorai.004G089600 Gossypium raimondii HOM05D005645 ORTHO05D007156 4.3e-89 332.0 265 63.0
Rhsim01G0284600 Rhododendron simsii HOM05D005645 ORTHO05D007156 4.3e-89 332.0 280 60.7
SGA_v2.0_scaffold2G01399 Striga asiatica HOM05D005645 ORTHO05D007156 9.6e-89 330.9 274 62.8
Duzib211G0390 Durio zibethinus HOM05D005645 ORTHO05D007156 2.1e-88 329.7 265 60.4
MBI19_g25350_MAGBIO Magnolia biondii HOM05D005645 ORTHO05D007156 2.1e-88 329.7 265 62.3
Cpa.g.c27813 Carica papaya HOM05D005645 ORTHO05D007156 3.7e-88 328.9 255 62.0
Dinv33051 Davidia involucrata HOM05D005645 ORTHO05D007156 4.8e-88 328.6 248 65.7
SGA_v2.0_scaffold1G00372 Striga asiatica HOM05D005645 ORTHO05D007156 4.8e-88 328.6 282 58.2
ClCG10G010870 Citrullus lanatus HOM05D005645 ORTHO05D007156 6.3e-88 328.2 282 59.6
HanXRQChr04g0118021 Helianthus annuus HOM05D005645 ORTHO05D007156 6.3e-88 328.2 281 59.1
TAR365G0052 Trochodendron aralioides HOM05D005645 ORTHO05D007156 1.1e-87 327.4 283 57.6
Nn4g25798 Nelumbo nucifera HOM05D005645 ORTHO05D007156 3.1e-87 325.9 271 61.6
QL12p028562 Quercus lobata HOM05D005645 ORTHO05D007156 3.1e-87 325.9 268 59.7
Eucgr.H01116 Eucalyptus grandis HOM05D005645 ORTHO05D007156 4.1e-87 325.5 282 57.1
Sed0014780 Sechium edule HOM05D005645 ORTHO05D007156 9.0e-87 324.3 271 59.8
Gorai.008G145600 Gossypium raimondii HOM05D005645 ORTHO05D007156 1.5e-86 323.6 269 60.2
CsaV3_4G000750 Cucumis sativus L. HOM05D005645 ORTHO05D007156 2.0e-86 323.2 283 57.6
Lsat_1_v5_gn_8_53521 Lactuca sativa HOM05D005645 ORTHO05D007156 2.6e-86 322.8 274 60.2
MD03G1287400 Malus domestica HOM05D005645 ORTHO05D007156 4.5e-86 322.0 287 58.2
Cfa005921 Carpinus fangiana HOM05D005645 ORTHO05D007156 2.2e-85 319.7 277 58.5
CiPaw.08G095700 Carya illinoinensis HOM05D005645 ORTHO05D007156 2.9e-85 319.3 286 56.6
Potri.014G130000 Populus trichocarpa HOM05D005645 ORTHO05D007156 3.8e-85 318.9 300 55.3
TWI23G0499 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 8.5e-85 317.8 271 57.6
CiPaw.07G108000 Carya illinoinensis HOM05D005645 ORTHO05D007156 3.2e-84 315.8 279 57.0
Sed0022873 Sechium edule HOM05D005645 ORTHO05D007156 4.2e-84 315.5 262 60.3
CANSAT25G0541 Cannabis sativa HOM05D005645 ORTHO05D007156 9.3e-84 314.3 271 58.7
Sabra14G0096600 Salix brachista HOM05D005645 ORTHO05D007156 9.3e-84 314.3 293 54.6
Sp6g02350 Schrenkiella parvula HOM05D005645 ORTHO05D007156 9.3e-84 314.3 256 60.9
Lsat_1_v5_gn_5_191140 Lactuca sativa HOM05D005645 ORTHO05D007156 1.2e-83 313.9 273 57.9
PSO210G7211 Papaver somniferum HOM05D005645 ORTHO05D007156 1.6e-83 313.5 305 54.1
PSO170G2082 Papaver somniferum HOM05D005645 ORTHO05D007156 2.7e-83 312.8 276 58.0
Gohir.A12G130800 Gossypium hirsutum HOM05D005645 ORTHO05D007156 4.6e-83 312.0 269 58.4
TAR370G0004 Trochodendron aralioides HOM05D005645 ORTHO05D007156 2.3e-82 309.7 293 55.3
HPP92_025206 Vanilla planifolia HOM05D005645 ORTHO05D007156 5.1e-82 308.5 285 57.2
ECA236G0211 Erigeron canadensis HOM05D005645 ORTHO05D007156 6.7e-82 308.1 277 56.7
Sabra02G0154200 Salix brachista HOM05D005645 ORTHO05D007156 6.7e-82 308.1 291 53.6
Prupe.8G260500 Prunus persica HOM05D005645 ORTHO05D007156 8.7e-82 307.8 269 58.7
EL10Ac7g17501 Beta vulgaris HOM05D005645 ORTHO05D007156 1.1e-81 307.4 272 57.4
Potri.002G205150 Populus trichocarpa HOM05D005645 ORTHO05D007156 1.9e-81 306.6 290 54.5
Carub.0006s3469 Capsella rubella HOM05D005645 ORTHO05D007156 3.3e-81 305.8 264 59.8
Sc09g0004020 Simmondsia chinensis HOM05D005645 ORTHO05D007156 4.3e-81 305.4 250 59.6
Actinidia21051 Actinidia chinensis HOM05D005645 ORTHO05D007156 5.7e-81 305.1 251 61.8
AT4G02440 Arabidopsis thaliana HOM05D005645 ORTHO05D007156 7.4e-81 304.7 257 60.7
FvH4_2g25611 Fragaria vesca HOM05D005645 ORTHO05D007156 2.2e-80 303.1 252 59.5
FAN24G3399 Fragaria x ananassa HOM05D003469 ORTHO05D004084 2.8e-80 302.8 246 60.2
MD11G1310800 Malus domestica HOM05D005645 ORTHO05D007156 8.2e-80 301.2 292 53.8
THA.LOC109115977 Tarenaya hassleriana HOM05D005645 ORTHO05D007156 1.1e-79 300.8 296 55.7
Aa31LG5G2090 Aethionema arabicum HOM05D005645 ORTHO05D007156 1.8e-79 300.1 257 59.1
AL6G50630 Arabidopsis lyrata HOM05D005645 ORTHO05D007156 2.4e-79 299.7 251 61.0
FAN27G1772 Fragaria x ananassa HOM05D005645 ORTHO05D007156 6.9e-79 298.1 252 59.1
Migut.N01502 Erythranthe guttata HOM05D005645 ORTHO05D007156 1.5e-78 297.0 271 57.6
CARHR250710 Cardamine hirsuta HOM05D005645 ORTHO05D007156 1.9e-76 290.0 246 61.0
arahy.Tifrunner.gnm1.ann1.LF73V2 Arachis hypogaea HOM05D005645 ORTHO05D007156 5.5e-76 288.5 256 57.0
AUR62008638 Chenopodium quinoa HOM05D005645 ORTHO05D007156 1.6e-75 287.0 292 52.4
CSS0029794 Camellia sinensis var. sinensis HOM05D005645 ORTHO05D007156 2.7e-75 286.2 269 56.5
AUR62033135 Chenopodium quinoa HOM05D005645 ORTHO05D007156 3.6e-75 285.8 291 51.9
Lj1g0011611 Lotus japonicus HOM05D005645 ORTHO05D007156 6.7e-74 281.6 280 52.1
BcaB01g02041 Brassica carinata HOM05D005645 ORTHO05D007156 8.8e-74 281.2 299 51.5
FAN15G1997 Fragaria x ananassa HOM05D005645 ORTHO05D007156 5.7e-73 278.5 237 58.6
Phvul.001G207000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 8.2e-72 274.6 263 54.0
VMungo1383G2661 Vigna mungo HOM05D005645 ORTHO05D007156 9.1e-71 271.2 254 55.1
ATR0796G303 Amborella trichopoda HOM05D005645 ORTHO05D007156 1.5e-70 270.4 359 42.9
Oeu011455.1 Olea europaea HOM05D005645 ORTHO05D007156 2.0e-70 270.0 249 55.8
BraA09t35841Z Brassica rapa HOM05D005645 ORTHO05D007156 1.0e-69 267.7 332 45.8
Lalb_Chr18g0047021 Lupinus albus HOM05D005645 ORTHO05D007156 1.3e-69 267.3 287 50.9
BcaNung04054 Brassica carinata HOM05D005645 ORTHO05D007156 2.2e-69 266.5 340 45.6
BolC9t53130H Brassica oleracea HOM05D005645 ORTHO05D007156 3.8e-69 265.8 340 45.9
C09p01980 Brassica napus HOM05D005645 ORTHO05D007156 1.8e-66 256.9 330 45.8
BcaNung05002 Brassica carinata HOM05D005645 ORTHO05D007156 3.0e-66 256.1 260 52.7
A09p01900 Brassica napus HOM05D005645 ORTHO05D007156 1.1e-65 254.2 349 42.4
Glyma.03G214300 Glycine max HOM05D005645 ORTHO05D007156 9.7e-65 251.1 267 48.7
SHI29059 Sapria himalayana HOM05D005645 ORTHO05D007156 9.7e-65 251.1 232 54.3
DCAR_018339 Daucus carota HOM05D005645 ORTHO05D007156 1.3e-64 250.8 250 52.4
GSVIVG01028000001 Vitis vinifera HOM05D005645 ORTHO05D007156 1.3e-64 250.8 240 53.8
TPR.G9640 Trifolium pratense HOM05D005645 ORTHO05D007156 3.7e-64 249.2 269 48.3
Ca_09155_v3 Cicer arietinum L. HOM05D005645 ORTHO05D007156 1.1e-63 247.7 284 47.5
Medtr7g108820 Medicago truncatula HOM05D005645 ORTHO05D007156 3.1e-63 246.1 246 52.4
Medtr8g058520 Medicago truncatula HOM05D005645 ORTHO05D007156 3.1e-63 246.1 246 52.4
Zm00001eb346660 Zea mays HOM05D005645 ORTHO05D007156 2.6e-62 243.0 288 45.5
MELO3C017961.2 Cucumis melo HOM05D005645 ORTHO05D007156 1.3e-61 240.7 133 82.7
Nn3g21470 Nelumbo nucifera HOM05D005645 ORTHO05D007156 1.3e-61 240.7 227 56.4
Psat3g022200 Pisum sativum HOM05D005645 ORTHO05D007156 2.9e-61 239.6 275 48.0
Actinidia24827 Actinidia chinensis HOM05D005645 ORTHO05D007156 6.5e-61 238.4 208 59.1
Os05g0365000 Oryza sativa ssp. japonica HOM05D005645 ORTHO05D007156 2.5e-60 236.5 262 45.8
Pp3c4_3650 Physcomitrium patens HOM05D005645 ORTHO05D007156 3.5e-54 216.1 295 41.4
Mapoly0034s0045 Marchantia polymorpha HOM05D005645 ORTHO05D007156 7.2e-52 208.4 353 39.1
Lalb_Chr06g0163461 Lupinus albus HOM05D005645 ORTHO05D007156 2.1e-51 206.8 271 43.2
SMO331G0040 Selaginella moellendorffii HOM05D005645 ORTHO05D007156 2.0e-49 200.3 235 45.1
AagrBONN_evm.TU.Sc2ySwM_228.5415 Anthoceros agrestis HOM05D005645 ORTHO05D007156 1.7e-48 197.2 355 36.1
SEGI_05916 Sequoiadendron giganteum HOM05D005645 ORTHO05D007156 1.7e-48 197.2 128 69.5
arahy.Tifrunner.gnm1.ann1.G1675E Arachis hypogaea HOM05D005645 ORTHO05D007156 2.2e-48 196.8 132 65.2
arahy.Tifrunner.gnm1.ann1.UILT17 Arachis hypogaea HOM05D005645 ORTHO05D007156 2.2e-48 196.8 132 65.2
Glyma.02G018450 Glycine max HOM05D005645 ORTHO05D007156 1.3e-45 187.6 246 41.9
Phvul.007G146000 Phaseolus vulgaris HOM05D005645 ORTHO05D007156 3.2e-44 183.0 128 63.3
VMungo0720G2164 Vigna mungo HOM05D005645 ORTHO05D007156 5.5e-44 182.2 135 62.2
Pp3c12_6520 Physcomitrium patens HOM05D005645 ORTHO05D007156 1.2e-41 174.5 126 61.9
HPP92_018255 Vanilla planifolia HOM05D005645 ORTHO05D007156 3.5e-38 162.9 235 37.9
MD05G1102300 Malus domestica HOM05D005645 ORTHO05D007156 7.8e-38 161.8 98 73.5
AagrBONN_evm.TU.Sc2ySwM_117.1647 Anthoceros agrestis HOM05D005645 ORTHO05D007156 1.1e-31 141.4 374 29.9
Haze_04926 Corylus avellana HOM05D005645 ORTHO05D007156 1.5e-25 120.9 159 44.7
CDE05G1077 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 1.4e-23 114.4 119 52.1
Haze_04922 Corylus avellana HOM05D005645 ORTHO05D007156 5.0e-21 105.9 156 42.3
TWI59G0946 Tripterygium wilfordii HOM05D005645 ORTHO05D007156 4.4e-17 92.8 161 36.6
Oeu046686.1 Olea europaea HOM05D005645 ORTHO05D007156 5.4e-15 85.9 64 65.6
MD05G1102200 Malus domestica HOM05D005645 ORTHO05D007156 3.5e-14 83.2 99 44.4
unitig_0.g662 Utricularia gibba HOM05D005645 ORTHO05D007156 9.5e-12 75.1 72 51.4
FAN15G0862 Fragaria x ananassa HOM05D005645 ORTHO05D046604 1.2e-09 68.2 97 40.2
SMO356G0542 Selaginella moellendorffii HOM05D002394 ORTHO05D002508 5.4e-07 59.3 114 31.6
FAN07G2129 Fragaria x ananassa HOM05D005645 ORTHO05D046604 2.1e-06 57.4 46 56.5


User provided reference genes

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