Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G338.40 Capsicum annuum HOM05D003146 ORTHO05D001819 1.0e-51 206.5 105 100.0
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 1.0e-43 179.9 102 90.2
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 2.0e-39 165.6 105 81.9
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 6.5e-38 160.6 105 76.2
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 5.5e-37 157.5 104 76.9
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 3.6e-36 154.8 103 76.7
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 3.6e-36 154.8 105 76.2
PGSC0003DMG400018189 Solanum tuberosum HOM05D003146 ORTHO05D001819 6.1e-36 154.1 103 74.8
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 1.4e-32 142.9 85 83.5
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 7.7e-31 137.1 104 71.2
CAN.G303.69 Capsicum annuum HOM05D003146 ORTHO05D001819 5.5e-29 131.0 87 74.7
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 6.3e-25 117.5 105 62.9
PGSC0003DMG400040362 Solanum tuberosum HOM05D003146 ORTHO05D001819 2.0e-23 112.5 101 60.4
CAN.G338.43 Capsicum annuum HOM05D003146 ORTHO05D001819 1.3e-22 109.8 96 57.3
Solyc03g112170.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 2.5e-21 105.5 93 54.8
Peaxi162Scf00126g00017 Petunia axillaris HOM05D003146 ORTHO05D001819 3.2e-21 105.1 103 56.3
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 3.2e-21 105.1 103 56.3
Nitab4.5_0000035g0080 Nicotiana tabacum HOM05D003146 ORTHO05D001819 4.2e-21 104.8 99 58.6
Nitab4.5_0005440g0020 Nicotiana tabacum HOM05D003146 ORTHO05D001819 5.5e-21 104.4 99 58.6
Sopen03g031260 Solanum pennellii HOM05D003146 ORTHO05D001819 1.2e-20 103.2 93 53.8
PGSC0003DMG400040957 Solanum tuberosum HOM05D014661 ORTHO05D001819 3.6e-20 101.7 93 52.7
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 1.0e-19 100.1 98 53.1
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.2e-18 96.7 99 53.5
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 1.2e-18 96.7 99 53.5
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 9.8e-18 93.6 101 48.5
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 1.4e-16 89.7 94 51.1
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 7.7e-15 84.0 103 46.6
ClCG09G008860 Citrullus lanatus HOM05D003146 ORTHO05D001819 7.2e-13 77.4 101 38.6
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 9.5e-13 77.0 98 40.8
DCAR_030435 Daucus carota HOM05D003146 ORTHO05D001819 3.6e-12 75.1 98 38.8
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 4.0e-11 71.6 96 44.8
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.2e-11 71.2 96 40.6
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.2e-11 71.2 96 40.6
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 5.2e-11 71.2 96 40.6
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.8e-11 70.9 95 37.9
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 8.8e-11 70.5 96 38.5
CsaV3_UNG044260 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.0e-10 69.3 94 40.4
CsaV3_UNG083670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.0e-10 69.3 94 40.4
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 2.6e-10 68.9 96 38.5
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 3.4e-10 68.6 98 39.8
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.4e-10 68.2 93 37.6
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 4.4e-10 68.2 101 37.6
Cc11_g04920 Coffea canephora HOM05D003146 ORTHO05D001819 7.5e-10 67.4 104 42.3
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.8e-10 67.0 96 38.5
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.8e-10 67.0 90 37.8
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.8e-10 67.0 90 37.8
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 9.8e-10 67.0 90 37.8
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-09 66.2 90 37.8
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-09 66.2 90 37.8
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-09 66.2 90 37.8
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-09 66.2 90 37.8
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.7e-09 66.2 90 37.8
Rhsim04G0244000 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.7e-09 66.2 100 41.0
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-09 65.9 96 37.5
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.2e-09 65.9 96 37.5
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.8e-09 65.5 96 37.5
DCAR_030436 Daucus carota HOM05D003146 ORTHO05D001819 3.7e-09 65.1 100 36.0
MELO3C027828.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.9e-09 64.7 96 36.5
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 8.3e-09 63.9 95 38.9
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 8.3e-09 63.9 95 38.9
MD16G1147400 Malus domestica HOM05D003146 ORTHO05D001819 8.3e-09 63.9 95 36.8
Rhsim04G0244300 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.1e-08 63.5 92 41.3
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 1.4e-08 63.2 96 36.5
DCAR_030437 Daucus carota HOM05D003146 ORTHO05D001819 1.4e-08 63.2 98 36.7
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 1.8e-08 62.8 97 34.0
Carub.0003s1698 Capsella rubella HOM05D003146 ORTHO05D001819 2.4e-08 62.4 99 35.4
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-08 62.4 96 35.4
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-08 62.4 96 36.5
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-08 62.4 96 36.5
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.4e-08 62.4 96 35.4
PGR004G1752 Punica granatum HOM05D003146 ORTHO05D001819 2.4e-08 62.4 98 37.8
Aa31LG8G4190 Aethionema arabicum HOM05D003146 ORTHO05D001819 3.1e-08 62.0 93 40.9
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.4e-08 61.2 95 35.8
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.4e-08 61.2 95 35.8
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 7.0e-08 60.8 95 34.7
BcaC09g48683 Brassica carinata HOM05D003146 ORTHO05D001819 7.0e-08 60.8 95 40.0
C01p46950 Brassica napus HOM05D003146 ORTHO05D001819 7.0e-08 60.8 95 40.0
C01p46980 Brassica napus HOM05D003146 ORTHO05D001819 7.0e-08 60.8 95 40.0
BolC1t04666H Brassica oleracea HOM05D003146 ORTHO05D001819 7.0e-08 60.8 95 40.0
AT3G17220 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 9.2e-08 60.5 95 34.7
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.2e-08 60.5 96 34.4
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.2e-08 60.5 96 35.4
Rhsim04G0244200 Rhododendron simsii HOM05D003146 ORTHO05D001819 9.2e-08 60.5 90 41.1
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 9.2e-08 60.5 95 35.8
BcaB04g20850 Brassica carinata HOM05D003146 ORTHO05D001819 1.2e-07 60.1 93 39.8
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.2e-07 60.1 96 34.4
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.6e-07 59.7 96 34.4
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.6e-07 59.7 96 34.4
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 1.6e-07 59.7 96 32.3
A01p37050 Brassica napus HOM05D003146 ORTHO05D001819 2.0e-07 59.3 95 38.9
CARHR174490 Cardamine hirsuta HOM05D001445 ORTHO05D001261 2.0e-07 59.3 69 42.0
BraA01t03766Z Brassica rapa HOM05D003146 ORTHO05D001819 2.7e-07 58.9 95 38.9
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 2.7e-07 58.9 95 37.9
BraA02t08034Z Brassica rapa HOM05D001445 ORTHO05D001261 4.5e-07 58.2 64 46.9
MELO3C034826.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.5e-07 58.2 87 35.6
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 4.5e-07 58.2 95 34.7
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 5.9e-07 57.8 89 32.6
PGSC0003DMG400040471 Solanum tuberosum HOM05D004113 ORTHO05D001819 7.7e-07 57.4 89 31.5
MELO3C019686.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-06 57.0 95 31.6
A02p30180 Brassica napus HOM05D001445 ORTHO05D001261 1.3e-06 56.6 64 45.3
Nn1g00654 Nelumbo nucifera HOM05D001445 ORTHO05D001261 1.7e-06 56.2 95 34.7
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.3e-06 55.8 57 49.1
Actinidia28299 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.3e-06 55.8 57 49.1
MELO3C030077.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.0e-06 54.7 96 33.3
BcaC03g16868 Brassica carinata HOM05D001445 ORTHO05D001261 6.6e-06 54.3 69 39.1
BcaC03g16912 Brassica carinata HOM05D001445 ORTHO05D001261 6.6e-06 54.3 65 41.5
C02p48140 Brassica napus HOM05D001445 ORTHO05D001261 6.6e-06 54.3 65 41.5
BolC2t10846H Brassica oleracea HOM05D001445 ORTHO05D001261 6.6e-06 54.3 65 41.5
Nn1g00664 Nelumbo nucifera HOM05D001445 ORTHO05D001261 6.6e-06 54.3 106 37.7
PSO782G2009 Papaver somniferum HOM05D001445 ORTHO05D001261 8.6e-06 53.9 100 30.0
Sp2g11740 Schrenkiella parvula HOM05D001445 ORTHO05D001261 8.6e-06 53.9 92 33.7


User provided reference genes

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