Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 7.6e-228 793.5 401 100.0
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 1.7e-187 659.4 398 83.4
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 5.0e-187 657.9 403 83.4
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 1.1e-186 656.8 401 83.3
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 2.6e-172 609.0 418 75.8
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 1.5e-162 576.6 349 84.2
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 2.0e-143 513.1 399 65.2
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.4e-141 506.9 398 64.6
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 2.4e-141 506.1 395 64.8
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 2.4e-141 506.1 290 85.2
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 7.7e-140 501.1 392 65.6
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 1.5e-138 496.9 395 63.3
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 5.6e-138 495.0 398 63.3
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 1.6e-137 493.4 390 63.3
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 1.3e-134 483.8 397 60.7
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 5.0e-131 471.9 392 62.0
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 2.8e-129 466.1 393 60.6
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 2.3e-128 463.0 396 59.1
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 5.2e-128 461.8 398 60.3
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 5.8e-127 458.4 394 60.2
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 2.2e-126 456.4 392 59.2
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 3.7e-126 455.7 396 58.3
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 4.9e-126 455.3 400 60.2
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 6.4e-126 454.9 390 59.7
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 8.3e-126 454.5 397 60.7
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 4.1e-125 452.2 391 60.6
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 5.4e-125 451.8 395 58.5
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 1.0e-123 447.6 390 58.7
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 1.3e-123 447.2 396 58.3
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 3.9e-123 445.7 395 56.5
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 6.6e-123 444.9 395 58.2
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 6.6e-123 444.9 390 57.2
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 6.6e-123 444.9 394 57.6
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 2.5e-122 443.0 396 56.1
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 7.3e-122 441.4 403 55.1
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 1.1e-120 437.6 391 59.3
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 1.1e-120 437.6 396 55.6
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.8e-120 436.8 396 57.3
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 1.8e-120 436.8 400 57.8
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 1.8e-120 436.8 403 56.3
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 2.3e-120 436.4 396 57.1
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 4.0e-120 435.6 406 55.4
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 1.2e-119 434.1 396 56.8
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 4.4e-119 432.2 396 56.3
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 3.7e-118 429.1 396 55.8
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 4.9e-118 428.7 392 57.7
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 6.4e-118 428.3 394 55.6
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 1.9e-117 426.8 401 55.9
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 1.9e-117 426.8 390 55.4
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 2.4e-117 426.4 396 54.3
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 4.1e-117 425.6 391 57.0
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 2.7e-116 422.9 396 55.3
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 1.5e-114 417.2 396 54.3
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 2.8e-113 412.9 396 55.6
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 4.7e-113 412.1 390 54.4
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 8.1e-113 411.4 322 65.2
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 3.1e-112 409.5 365 57.5
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 5.2e-112 408.7 390 55.1
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 2.0e-111 406.8 403 51.4
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 1.1e-109 401.0 390 54.6
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 1.4e-109 400.6 336 57.4
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 3.2e-109 399.4 392 51.0
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 5.4e-109 398.7 390 54.1
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 9.2e-109 397.9 363 54.5
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 9.2e-109 397.9 362 57.2
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 1.6e-108 397.1 390 53.1
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 4.6e-108 395.6 391 55.2
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 1.3e-107 394.0 392 53.3
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 1.3e-107 394.0 394 52.8
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 1.7e-107 393.7 390 52.8
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 1.7e-107 393.7 390 53.3
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 1.7e-107 393.7 394 52.0
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 2.3e-107 393.3 418 50.5
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 6.6e-107 391.7 387 52.7
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 2.8e-105 386.3 387 51.4
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 1.4e-104 384.0 372 54.0
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 7.6e-103 378.3 392 53.3
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 1.7e-102 377.1 396 50.0
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 3.2e-101 372.9 396 52.0
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 2.1e-100 370.2 349 53.6
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 3.9e-99 365.9 395 51.6
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 1.1e-98 364.4 322 57.8
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 2.0e-95 353.6 268 64.9
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 1.1e-93 347.8 349 52.4
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 9.3e-93 344.7 315 53.0
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 2.1e-92 343.6 328 58.2
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 1.4e-88 330.9 299 56.9
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 1.5e-82 310.8 302 55.0
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 4.3e-82 309.3 292 52.4
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 3.7e-81 306.2 314 51.3
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 3.4e-79 299.7 270 58.1
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 3.3e-74 283.1 378 43.1
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 1.1e-72 278.1 394 42.4
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 2.1e-68 263.8 243 55.1
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 3.6e-60 236.5 233 54.1
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 7.2e-53 212.2 232 51.7
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 3.6e-52 209.9 198 51.0
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 1.8e-48 197.6 396 34.1
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 8.5e-46 188.7 220 45.9
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.0e-43 180.3 386 33.9
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 2.2e-41 174.1 206 43.7
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 6.3e-41 172.6 360 31.7
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 2.7e-39 167.2 285 36.1
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 7.0e-32 142.5 238 39.5
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 5.2e-27 126.3 102 69.6
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 3.7e-25 120.2 114 51.8
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 3.1e-24 117.1 134 42.5
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 3.9e-14 83.6 86 50.0
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 1.1e-11 75.5 108 37.0
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 4.9e-09 66.6 103 36.9
Rhsim06G0218700 Rhododendron simsii HOM05D007013 ORTHO05D008999 3.2e-08 63.9 50 58.0


User provided reference genes

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